G85760


Basic Information

Item Value
gene id G85760
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 16584317 ~ 16584765 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU107044
CTTAAAGCAGTTCTTGAACTTCTGACTGACAAAGTAGAGGGCCACAGGGTTGATGCAGGAGTTGAGGGAGGCCATGTTGATTCCGATGTAGTCCATCACCAGCAGAAAGCTTatcaagagagggagagggagagtcaCTGATACTGGCAGAGCACTCTCATAAGCTTTATTGGGCTGGAGGAGGCAGATGATTCAGGGAGCTTGTGTGGACACTGGGACACTAGGACATGTGCGAGAGTGTCAGGCGGCGGACTTTGGCCTGTACCTGAGCAGCTCACAGCGGTTCGGGTCGTTCATGTCATAgatggttttcttcaagatgcGGCTGAGGTGCAAGGGCAGCCAGCACAGTGCGAAGATCACCACCAGGCAGAACACCGTCTTGGCAACCTCTCGGCGCtgcagagggggaggaggggcaCAGTTGAACTCTGGATCAGGTACCCGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU107044 True 449 lncRNA 0.55 1 16584317 16584765

Neighbor

gene id symbol gene type direction distance location
AMCG00021403 NA coding upstream 4773 16573928 ~ 16579544 (+)
AMCG00021401 NA coding upstream 22541 16556598 ~ 16561776 (+)
AMCG00021399 nup62,LOC100135786,LOC106603332 coding upstream 28672 16550033 ~ 16555645 (+)
AMCG00021400 cnga2,LOC103395327 coding upstream 38818 16541957 ~ 16545499 (+)
AMCG00021402 NA coding upstream 48501 16531948 ~ 16535816 (+)
AMCG00021407 LOC105927798,LOC100704732,LOC103366304,LOC102229095,LOC107386560,LOC101162152,LOC101061287 coding downstream 51590 16636355 ~ 16642487 (+)
AMCG00021408 NA coding downstream 68675 16653440 ~ 16655886 (+)
AMCG00021415 NA coding downstream 170168 16754933 ~ 16756372 (+)
AMCG00021416 NA coding downstream 193817 16778582 ~ 16790852 (+)
AMCG00021417 NA coding downstream 212893 16797658 ~ 16806805 (+)
G85758 NA non-coding upstream 11449 16572193 ~ 16572868 (+)
G85757 NA non-coding upstream 14667 16569447 ~ 16569650 (+)
G85746 NA non-coding upstream 34972 16547657 ~ 16549345 (+)
G85674 NA non-coding upstream 292124 16289749 ~ 16292193 (+)
G85623 NA non-coding upstream 414431 16140523 ~ 16169886 (+)
G85763 LOC105929187 non-coding downstream 1552 16586317 ~ 16589411 (+)
G85766 NA non-coding downstream 11436 16596201 ~ 16596902 (+)
G85784 NA non-coding downstream 62374 16647139 ~ 16649848 (+)
G85823 NA non-coding downstream 223041 16807806 ~ 16809314 (+)
G85876 NA non-coding downstream 451807 17036572 ~ 17042575 (+)
AMCG00021373 ubl3b,LOC107658069,LOC107707244,LOC108432919,LOC101472018,LOC107092570,LOC105029324,LOC100692344,LOC103390851 other upstream 510696 16063499 ~ 16073621 (+)
AMCG00021349 mmgt1,tmm32,LOC107658091,LOC107560676,LOC102787804 other upstream 1151953 15428477 ~ 15432364 (+)
AMCG00021292 NA other upstream 2511192 14069330 ~ 14073125 (+)
AMCG00021296 NA other upstream 2550760 14016133 ~ 14033557 (+)
AMCG00021267 timm8a,LOC107593201 other upstream 3146909 13435307 ~ 13437408 (+)
G85764 LOC103366846,LOC106930986 other downstream 5416 16590181 ~ 16592973 (+)
G85787 NA other downstream 71879 16656644 ~ 16714038 (+)
G85869 NA other downstream 413112 16997877 ~ 17004131 (+)
AMCG00021441 NA other downstream 885560 17470325 ~ 17473396 (+)
G86121 NA other downstream 1663725 18248490 ~ 18249686 (+)

Expression


Co-expression Network