G87803


Basic Information

Item Value
gene id G87803
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 25896958 ~ 25898041 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU109590
AATCGATTCTCTACCCACAATGCACAGCAACTGacgtaaatatatttaaatgagacACGGTGAGAACGAaagaatattttttgtgtttatgacGGTTCTGAGACATGGTCGGTTAGCCTAGACGCCGGGCTCGGTGCATATGTCGCCGGCTGACTGCGTGGGCTGTGATCTGATACGCTCCCTTCATGTTGATTGGTTTTCTCAGAAGCTGAAAGAATGAGCTCTTCTTCCGAGTGTGCTCTGGCCTGGAGAAACTGAGAGAGAGCAGTTTTCTCCCTTTCATTCTGCAGGAGCCGAATGtttttgttCTAGAATACCGGCAGAACATCTGGAAGGCTGTAATACTGCTGATCGCCAGTATCATTGGCAATCTACTGCATGTCACTGGAAACTACAAGGTAACACTTCTGATCAGATTGCGTAAGGCAGGATGGCAGGAGTGTGAAGGACAACAAACCCCTATTCAAACTATTTCCATATTCTCCAGGATTTCCAGGGGTTAACAGCTTTGTTTGT
>TU109591
AATCGATTCTCTACCCACAATGCACAGCAACTGacgtaaatatatttaaatgagacACGGTGAGAACGAaagaatattttttgtgtttatgacGGTTCTGAGACATGGTCGGTTAGCCTAGACGCCGGGCTCGGTGCATATGTCGCCGGCTGACTGCGTGGGCTGTGATCTGATACGGTCTGTAAGCAGGGCTCCTCAGCCTGAATATTTGGACTTCTAGTTTAAATTGTCATGATTATGACATATAGGATAAGAATGCCAGGCTGCATGGCAGCTCCCTTCATGTTGATTGGTTTTCTCAGAAGCTGAAAGAATGAGCTCTTCTTCCGAGTGTGCTCTGGCCTGGAGAAACTGAGAGAGAGCAGTTTTCTCCCTTTCATTCTGCAGGAGCCGAATGtttttgttCTAGAATACCGGCAGAACATCTGGAAGGCTGTAATACTGCTGATCGCCAGTATCATTGGCAATCTACTGCATGTCACTGGAAACTACAAGGATTTCCAGGGGTTAACAGCTTTGTTTGT
>TU109592
AATCGATTCTCTACCCACAATGCACAGCAACTGacgtaaatatatttaaatgagacACGCTCCCTTCATGTTGATTGGTTTTCTCAGAAGCTGAAAGAATGAGCTCTTCTTCCGAGTGTGCTCTGGCCTGGAGAAACTGAGAGAGAGCAGTTTTCTCCCTTTCATTCTGCAGGAGCCGAATGtttttgttCTAGAATACCGGCAGAACATCTGGAAGGCTGTAATACTGCTGATCGCCAGTATCATTGGCAATCTACTGCATGTCACTGGAAACTACAAGGATTTCCAGGGGTTAACAGCTTTGTTTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU109590 False 516 lncRNA 0.46 4 25896958 25898041
TU109591 True 524 lncRNA 0.45 4 25896958 25898041
TU109592 False 309 lncRNA 0.44 4 25896958 25898041

Neighbor

gene id symbol gene type direction distance location
AMCG00021695 NA coding downstream 12726 25873891 ~ 25884232 (-)
AMCG00021696 NA coding downstream 97294 25719357 ~ 25799664 (-)
AMCG00021690 NA coding downstream 183192 25705576 ~ 25713766 (-)
AMCG00021691 top2b,LOC106570304 coding downstream 192130 25682770 ~ 25704828 (-)
AMCG00021686 nkiras1,LOC106588667 coding downstream 485396 25406702 ~ 25411562 (-)
AMCG00021699 elmo1,LOC107710279,LOC107556397 coding upstream 64873 25962914 ~ 25976336 (-)
AMCG00021698 elmo1,LOC106570440,LOC106515744,LOC107702083 coding upstream 127357 26025398 ~ 26056857 (-)
AMCG00021701 NA coding upstream 185737 26083778 ~ 26089986 (-)
AMCG00021710 NA coding upstream 542614 26440655 ~ 26472215 (-)
AMCG00021709 NA coding upstream 666165 26564206 ~ 26566938 (-)
G87800 NA non-coding downstream 10981 25885334 ~ 25885977 (-)
G87767 NA non-coding downstream 87754 25803340 ~ 25809204 (-)
G87756 NA non-coding downstream 127062 25769396 ~ 25769896 (-)
G87720 NA non-coding downstream 215938 25678187 ~ 25681020 (-)
G87719 NA non-coding downstream 219541 25676983 ~ 25677417 (-)
G87882 NA non-coding upstream 496910 26394951 ~ 26395179 (-)
G87883 gabbr2 non-coding upstream 520639 26418680 ~ 26418899 (-)
G87884 NA non-coding upstream 534103 26432144 ~ 26437893 (-)
G87980 NA non-coding upstream 900050 26798091 ~ 26800715 (-)
G87992 NA non-coding upstream 994435 26892476 ~ 26895336 (-)
G87674 NA other downstream 490420 25403650 ~ 25406538 (-)
AMCG00021668 NA other downstream 1533499 24342900 ~ 24363459 (-)
AMCG00021662 NA other downstream 1686753 24199536 ~ 24210205 (-)
AMCG00021634 NA other downstream 2398197 23495025 ~ 23498761 (-)
G87263 NA other downstream 2558474 23338251 ~ 23338484 (-)
G87806 NA other upstream 7403 25905444 ~ 25908005 (-)
AMCG00021700 NA other upstream 193186 26091227 ~ 26105391 (-)
G87871 NA other upstream 254064 26152105 ~ 26154375 (-)
AMCG00021719 ndrg1a other upstream 776037 26674078 ~ 26718508 (-)
AMCG00021723 hsf1 other upstream 1001922 26899963 ~ 26919844 (-)

Expression


Co-expression Network