XLOC_006298


Basic Information

Item Value
gene id XLOC_006298
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 51617783 ~ 51625567 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013701
ctgcaggGTCACAGATCAGCGATACGAGCGTCTGCCGTTCTTCATCTTCGGTGACTTTAACTTTCGGCTGGACTCCAGGCAGGTCATCGAGtgtGCGGTGGGCTCCGGGTGACCTCGCTGTGGCTGAGTGACAGTGCAGAGGTGCATGCTGGGACGGTGTGGACCCCAGGGCTCTGGCGGTAGTGAATCAGCGGTGCAGTGACAGCGCAGCCTCACACTCACTGTATTTAAAATCCCTCCTCATTAAACTTAATCGAATGTAAATTTAATTAGTGTGAAGATGGCGGCGCTTCCAGGCTCAGGATTGATGGAGGCCGGCGGGAGGGTTAATTACTGACGTGATCTACTGCTGCGCTGACAGAAGGagagcgacacaca

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013701 True 378 lncRNA 0.55 2 51617783 51625567

Neighbor

gene id symbol gene type direction distance location
XLOC_006297 nkx6.2 coding upstream 33519 51579851 ~ 51584264 (+)
XLOC_006296 NA coding upstream 155116 51444994 ~ 51462667 (+)
XLOC_006295 NA coding upstream 177890 51433834 ~ 51439893 (+)
XLOC_006294 CABZ01094390.1 coding upstream 186466 51428398 ~ 51431317 (+)
XLOC_006293 NA coding upstream 285019 51328470 ~ 51332764 (+)
XLOC_006299 pwwp2b coding downstream 85158 51710725 ~ 51731298 (+)
XLOC_006300 NA coding downstream 115987 51741554 ~ 51795401 (+)
XLOC_006301 LT631684.1 coding downstream 228149 51853716 ~ 51881759 (+)
XLOC_006302 lclat1 coding downstream 330830 51956397 ~ 51963460 (+)
XLOC_006303 klhdc3 coding downstream 356197 51981764 ~ 51988216 (+)
XLOC_006292 NA non-coding upstream 299049 51317224 ~ 51318734 (+)
XLOC_006307 NA non-coding downstream 495270 52120837 ~ 52136375 (+)
XLOC_006308 NA non-coding downstream 544382 52169949 ~ 52174571 (+)
XLOC_006291 CU929144.1 coding upstream 242075 51297553 ~ 51375708 (+)

Expression


Co-expression Network