XLOC_006305 (CABZ01089777.1)


Basic Information

Item Value
gene id XLOC_006305
gene name CABZ01089777.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 52061034 ~ 52069970 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00012301
ATGAACTTCGCCGCTCAGTTTTTCGCTAATTTTATGAATGAAAACCCGCAGGAGCCGCGCAGAGGATTCAGTGACTGCGAGGAGTATGATCCGTTCTGGCAGAGTGCTGAGCAGCGCCGTGGATCCGCAAAGCCTGACTGCTCATTCCACAGCGGCCCCTGCACTCGAGACCCGCTGGTGCTGATGGGGAATGGGCGCACGGGCCGCCGCTCCACACTCATCTGCCCAGAGAGACTCAAAGACTTCGGAGCTGAAGAATACCTGAACGGAGACGTGAAGACCTTCCAGACCAGCGTCTCTGAGCCGGCGGAGCTGCAGCTGATGTCCACCCCCAAACCAGCCGCGAAGAAGAGCACCGACAGCAAGAAGAGTAGCACACCTCCGGCTCCAGAACACCTGCGCTTCCAGGACATCAGCGCCGCGGCCTTCAGACTACAGCAGTCCAGCCTACAGAAAACACCCTGCACGTACTCCAGACTGTCCAAACAGTATGGCATGGAGATTTACCTGAAGAAGGAGCTGCTCCACTACACCGGCTCAGTAAAGGAGAGAGGAGTGCTGTACCTGCTGTCCTCCCTCAAACAGgatcaGCAGAGGAAGGGTGTGATTGTGGCCACAGACTGTAACTTCTCGATGTCGGTGGCGTATCATGCGGTGGAGATGCGTATCCCGGTGTTCGTCATCATGCCAGCGTGCAGCTCTCCTCCTCGTCTGCGCATGTACAGAGATTACGGAGCCATGGTTATTTCCTACGGCAGCACAGCCCGAGACTCAATCAACCACGCCCGACACCTGGCCAAGGAGAACGGATACCTGTGTCTGGAGGAGGACGACAGCGCTGTGTATCTGGCAGGTCTGCGAACAGTGGGTATGGAGATCTACGAGCAGGTGCCCAAACTGGACGCTGTGGTGGTGCCAGCGGGTGGACATTGTGGCCTACTGGCAGGAACTGCAGCCGCCATCAAACACCTGAACCCTCGCATCTCTGTCATAGGTGTGGAGCCGGAGGAGTTCCCTCTTCTCCTGCAGTCGCTCAAAACAGATTCTCCCATTAAAGACCTCTACTGCAACCCCAACAAGAAGCTCTACAGAGGTGAAGTTAGGAACTTGTgtttatatgaagagttcagacgcAAAACTTTTAGTTGTCCTtag

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000100613

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00012301 True 1155 mRNA 0.56 6 52061034 52069970

Neighbor

gene id symbol gene type direction distance location
XLOC_006304 npas4l coding upstream 44021 52006253 ~ 52017013 (+)
XLOC_006303 klhdc3 coding upstream 72818 51981764 ~ 51988216 (+)
XLOC_006302 lclat1 coding upstream 97574 51956397 ~ 51963460 (+)
XLOC_006301 LT631684.1 coding upstream 179275 51853716 ~ 51881759 (+)
XLOC_006300 NA coding upstream 265633 51741554 ~ 51795401 (+)
XLOC_006306 CABZ01092745.1 coding downstream 2001 52071971 ~ 52105015 (+)
XLOC_006307 NA coding downstream 50867 52120837 ~ 52136375 (+)
XLOC_006308 NA coding downstream 99979 52169949 ~ 52174571 (+)
XLOC_006298 NA non-coding upstream 435467 51617783 ~ 51625567 (+)
XLOC_006296 NA non-coding upstream 598367 51444994 ~ 51462667 (+)
XLOC_006295 NA non-coding upstream 621141 51433834 ~ 51439893 (+)
XLOC_006294 CABZ01094390.1 non-coding upstream 629717 51428398 ~ 51431317 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01180000_02998131_03010201 NA coding CI01180000 null 2998131 ~ 3010503 (+)