XLOC_006356 (znf451)


Basic Information

Item Value
gene id XLOC_006356
gene name znf451
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 1409786 ~ 1427240 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00012358
AGCCTCCAGTGTGATGAACGCAGAGGAGAAACGAGCCTCTAGTGTGATGAACGCAGAGGAGAAACGAGCCTCTAGTGTGATCAACGCAGAGGAGATCTTCCCTCAGAGTAACGttgaagAGGCTGAAGATGTAAATAATGCCATTGCCTCAGGTGTTCTCGATGTTAAAAAAGAGACCACCGTTTCACAAGACGATGGTGAAGGAGATGACGCTAAATTTGACGAGGACATGAAGCAGGCTGTGGCCTTGAGTCTGAAGGAGGCCAGGAAAACTGCAGATCTGAGAACGGTGTAGAGGCTGTACTGAGAGTTTCTGTGAGCGTCTCACTTCATGCATGAGtcaatctgagctttattttgctAGTTTGTGTAGCAGAAAGAAGATTAGTGGTGTTGAATTGGAAGAAGCCCTGAGAAGAAGCTTGGAGGAATTCTGACAACATTATGATTTAGATTCAAGgtgttttgtttgttcgtttagtCCGTGCACTGTATTCACgaaacattttatttgttgttcttcaaAGTTAAATAAAGCAGAGTAACTCAGA
>TCONS_00012359
CTGGTGTCCGCTTCAGATGTGTGCTTGGATTTGtgATGGATGTGATGCTCCAGAatcgcagcggtgatgtttgagGATCCGGAAGATGATGTGCAGTTCGTGTCTGAGGCTCCTCTCAGACCAGTGCTGGAATGCATTGACCTGCTGAGTGACGGAGATGATGAAGACGATTTACCTGCTGCAAACACGATCGAGCAGCAGGTGGACCGCCAGAGAGCTCATGCCGTCTCCACACTGGACAGACTGGCTCAGCAGGTCGCGGTGGAGAAACAGGAGAGGGCCGAAAAGAGGAAAGCCTTCAAGgAGAAGATGATTTCGCTGCAGGCACAAGGACGCCGCGAGCTGTCGGTCAGCCATGATAATAGTGCAAGCGGCGATGCCAAACGATGTGTGGATATTTGGCTAAAAATGCCAGGACTGCAGCCGGGCTCCATTTATTCAGGCTCTCTGTGGAAGCGCAGATCGGCTCCTCCTGCGGTGAGATTTTCTCCTCAGAGCTGTCCGGTCATCAACTGCGGACGAGTCTACGACAATATTCCTCTGCTTCAGGGACATCTCAAAAGGTTTGATCATTCACCCTGTGACCCCACCATCACCCTGAAAGGCACCGCACCATCCATCTATGCCTGTTTGGCCTGTGGAGAACACTTCTGCTCCCAGGAGACATGGAAACAACACATGCAGTCCAAGCTGTCATCGGATGGTCACCGTCGCTCTCAGATGTATCAGATGATCGTGGGCTTCGCCTGTCCCTCCTGCTACTTCCTCTTCAACAGCAAAGACGAGTGCTGTAAACACATGAACGCAAGAAAACACAACCGTCAAGTCATTTCTCTTACCGAAGAGAAAGCATCAGCAGTGCCTGTTCCTGTGCCGCGCTTCGCTAAACAGCGTCTAATCGCTCTCTGTAAAGACATCGGCTTCAGCGTGCGATGCACAGTCTGCTCTCAGCGGCTCAACTCGCACATGGAGGCCACCGCACACTTCAACGTGCACTGCAGAGACGGCTGCGCTATCGCTACCGCAGATCAAACCGTTGCAGACATGATGAAAAAGATGGCGGTCGTCGGTCACTGCATTTCCTGTCCTGAAGTGTTTCTGAGTTTGGATCAAATGCAGGAGCACAAAGAGCGAATGAAACACGACGTGGAGAACATCACACTCCTAGAGCGCGCACTTTTGCACTACAGCAACCACTGCGAAACCAGAACCAATCAGAAGAGAGCGTCAAACGAAGACCATTCAGCCAAACGAAAGAGAGCTGAAGACTCGGATTCGCAAGTCAAACGAGAAAGAAAGCATTCGAATGTGGCTTGGTTTTGCGAGTGCGGCCTTCGCTTCGTTGAAGAAAACCACGCAAAGAGACACCAGCAAGCCGCCAATCAGATCTTTCACAAATGTGCAGTGTGCGGGAAACTAACCGGCGAATCCTCCATCGCGCGCTTGCATATGAGTCGTTTCCATGGTGGCGCGCATCTATCCAACTTCCTGTTTTACTGTAGGAAGTGCAAAGTGGAAATGCCCAGGATGGAGGATATAATGGCGCACGTTAGCGCTAGCCATCAAGGACACAACTACTATGAAGAACGAGAAGATAGCGGCAGCGTAATTGATCAAATATCGGCAAAACCATCAACCAGCAAAGAATGTGAACCAATCAGAAGCGTCTCCCCAAAAAAGACAGAGTCGTGGCTTTGTCGAATGTGCGAGGATTTGTTTGATTCGGAGAAGTTGGTACGAAAGCATTGCGGAGATTTGAGCAGCCATAGTTTCCAGAGGTTTGCATGCGGTCACTGTCCGCAGAAGTTCTTCAAGGACTCGACTCTACGACGACATTGCGCTAACGAGCATAACGGTGATGTAGCGTTGCGCTACTTTTGTGGGCTTTGCGATAGCATGCTGTTCGATACCGAAAACGAGTTCCAGGTGCACTACGACAATCTGCACAGCCAAGATTACTACCGTTTGGAAACATCGACAAATCATTCGCAAAATGCACCGGAAGTCATTGTTAATAATAGTAACACGAGCGATTCCCAAACATGTCTTTGCATGGGATCAAAGAAATCCAGAGAGGAACGGAAGCCTGTTTATACAAACTGCATGAAGCAGTTGGCTGCTGAAAACAAATGCAGATACCGATGTCGCAATTGCGCTAAAAGCGCTCAGAGCTACGCTGAGATGAAGACGCACATCTTGTTGAAACACAAAGGAAATGGGAAGAGTTTTGATGTCGTGTGCATGATCTGCTCTCAGAGTCACAAAGATGTTCCCAGTTTTCATGCACACCATCATATACATCACTGCCAGGCAGAACCGTGCACTTATTCCCGACCCGATGCAGAGGAGAAACGAGCCTCCGGTGTGAACGATGCAGAGGAGAAACGAGCCTCCGGTGTGATCAACGCAGAGGAGAAACGAGCCTCCGGTGTGATCAACGCAGAGGAGAAACGAGTTTCCAGTGTGATGAACGCAGAGGAGAAACGAGCCTCCAGTGTGATGAACGCAGAGGAGAAACGAGCCTCTAGTGTGATGAACGCAGAGGAGAAACGAGCCTCTAGTGTGATCAACGCAGAGGAGATCTTCCCTCAGAGTAACGttgaagAGGCTGAAGATGTAAATAATGCCATTGCCTCAGGTGTTCTCGATGTTAAAAAAGAGACCACCGTTTCACAAGACGATGGTGAAGGAGATGACGCTAAATTTGACGAGGACATGAAGCAGGCTGTGGCCTTGAGTCTGAAGGAGGCCAGGAAAACTGCAGATCTGAGAACGGAATTGGAAGAAGCCCTGAGAAGAAGCTTGGAGGAATTCTGACAACATTATGATTTAGATTCAAGgtgttttgtttgttcgtttagtCCGTGCACTGTATTCACgaaacattttatttgttgttcttcaaAGTTAAATAAAGCAGAGTAACTCAGA
>TCONS_00012360
gAGAAGATGATTTCGCTGCAGGCACAAGGACGCCGCGAGCTGTCGGTCAGCCATGATAATAGTGCAAGCGGCGATGCCAAACGATGTGTGGATATTTGGCTAAAAATGCCAGGTAAGTAGTGTTCTTCtgtcaagggatagttcacccaaaccaGAAACCCTgttcatttattctccctcagcCCACCCAAGATATAGGTGTTTGCTTTTCCTCAAGAAGATTTTTAGAGGATGTTTACATTGtcatatacacttgaagtcagaattattagctctcctgtatatttcccccccaatttctgtttcacagAGAGacttttctcaacacatttctaatcataatagttttaataactcatttctaatagctgatttcttttctctttgtcatgatgacagcacataatattagactagatattcttcaagacactagtattcagcttaaagtgacatttaaaggcttaaccagggtaattagggtaaagttagggtaattaggcaagtcattgcataacagtgcaatccaaaataaatattggttaagggggctaataatattgaccttaaaatgggtttataaaaaattaaaaactcctttTCAAGCCGAAAtgaaacgaataagactttccccagcagaaaaaaaatgttagtaatactgtgaaaaatttctgaatctgttaaaaatcattcgGGAATTATCTGAAAAAGAAAATTGACAAGAGGGCGAATATttatgatttcaactgtatataaatgttcatttcttCTGTGCCGCTCAGGACTGCAGCCGGGCTCCATTTATTCAGGCTCTCTGTGGAAGCGCAGATCGGCTCCTCCTGCGGTGAGATTTTCTCCTCAGAGCTGTCCGGTCATCAACTGCGGACGAGTCTACGACAATATTCCTCTGCTTCAGGGACATCTCAAAAGGTTTGATCATTCACCCTGTGACCCCACCATCACCCTGAAAGGCACCGCACCATCCATCTATGCCTGTTTGGCCTGTGGAGAACACTTCTGCTCCCAGGAGACATGGAAACAACACATGCAGTCCAAGCTGTCATCGGATGGTCACCGTCGCTCTCAGATGTATCAGATGATCGTGGGCTTCGCCTGTCCCTCCTGCTACTTCCTCTTCAACAGCAAAGACGAGTGCTGTAAACACATGAACGCAAGAAAACACAACCGTCAAGTCATTTCTCTTACCGAAGAGAAAGCATCAGCAGTGCCTGTTCCTGTGCCGCGCTTCGCTAAACAGCGTCTAATCGCTCTCTGTAAAGACATCGGCTTCAGCGTGCGATGCACAGTCTGCTCTCAGCGGCTCAACTCGCACATGGAGGCCACCGCACACTTCAACGTGCACTGCAGAGACGGCTGCGCTATCGCTACCGCAGATCAAACCGTTGCAGACATGATGAAAAAGATGGCGGTCGTCGGTCACTGCATTTCCTGTCCTGAAGTGTTTCTGAGTTTGGATCAAATGCAGGAGCACAAAGAGCGAATGAAACACGACGTGGAGAACATCACACTCCTAGAGCGCGCACTTTTGCACTACAGCAACCACTGCGAAACCAGAACCAATCAGAAGAGAGCGTCAAACGAAGACCATTCAGCCAAACGAAAGAGAGCTGAAGACTCGGATTCGCAAGTCAAACGAGAAAGAAAGCATTCGAATGTGGCTTGGTTTTGCGAGTGCGGCCTTCGCTTCGTTGAAGAAAACCACGCAAAGAGACACCAGCAAGCCGCCAATCAGATCTTTCACAAATGTGCAGTGTGCGGGAAACTAACCGGCGAATCCTCCATCGCGCGCTTGCATATGAGTCGTTTCCATGGTGGCGCGCATCTATCCAACTTCCTGTTTTACTGTAGGAAGTGCAAAGTGGAAATGCCCAGGATGGAGGATATAATGGCGCACGTTAGCGCTAGCCATCAAGGACACAACTACTATGAAGAACGAGAAGATAGCGGCAGCGTAATTGATCAAATATCGGCAAAACCATCAACCAGCAAAGAATGTGAACCAATCAGAAGCGTCTCCCCAAAAAAGACAGAGTCGTGGCTTTGTCGAATGTGCGAGGATTTGTTTGATTCGGAGAAGTTGGTACGAAAGCATTGCGGAGATTTGAGCAGCCATAGTTTCCAGAGGTTTGCATGCGGTCACTGTCCGCAGAAGTTCTTCAAGGACTCGACTCTACGACGACATTGCGCTAACGAGCATAACGGTGATGTAGCGTTGCGCTACTTTTGTGGGCTTTGCGATAGCATGCTGTTCGATACCGAAAACGAGTTCCAGGTGCACTACGACAATCTGCACAGCCAAGATTACTACCGTTTGGAAACATCGACAAATCATTCGCAAAATGCACCGGAAGTCATTGTTAATAATAGTAACACGAGCGATTCCCAAACATGTCTTTGCATGGGATCAAAGAAATCCAGAGAGGAACGGAAGCCTGTTTATACAAACTGCATGAAGCAGTTGGCTGCTGAAAACAAATGCAGATACCGATGTCGCAATTGCGCTAAAAGCGCTCAGAGCTACGCTGAGATGAAGACGCACATCTTGTTGAAACACAAAGGAAATGGGAAGAGTTTTGATGTCGTGTGCATGATCTGCTCTCAGAGTCACAAAGATGTTCCCAGTTTTCATGCACACCATCATATACATCACTGCCAGGCAGAACCGTGCACTTATTCCCGACCCGATGCAGAGGAGAAACGAGCCTCCGGTGTGAACGATGCAGAGGAGAAACGAGCCTCCGGTGTGATCAACGCAGAGGAGAAACGAGCCTCCGGTGTGATCAACGCAGAGGAGAAACGAGTTTCCAGTGTGATGAACGCAGAGGAGAAACGAGCCTCCAGTGTGATGAACGCAGAGGAGAAACGAGCCTCTAGTGTGATGAACGCAGAGGAGAAACGAGCCTCTAGTGTGATCAACGCAGAGGAGATCTTCCCTCAGAGTAACGttgaagAGGCTGAAGATGTAAATAATGCCATTGCCTCAGGTGTTCTCGATGTTAAAAAAGAGACCACCGTTTCACAAGACGATGGTGAAGGAGATGACGGTAGGTTTTCACTTTCCTCACttgtttacactgaaaaaaaaataataataataaataaataa

Function

symbol description
znf451 Predicted to enable SUMO ligase activity and transcription corepressor activity. Predicted to be involved in negative regulation of transcription initiation from RNA polymerase II promoter; positive regulation of transcription by RNA polymerase II; and protein sumoylation. Predicted to be active in nucleus. Orthologous to human ZNF451 (zinc finger protein 451).

GO:

id name namespace
GO:0060633 negative regulation of transcription initiation from RNA polymerase II promoter biological_process
GO:0010468 regulation of gene expression biological_process
GO:0045944 positive regulation of transcription by RNA polymerase II biological_process
GO:0016925 protein sumoylation biological_process
GO:0005634 nucleus cellular_component
GO:0061665 SUMO ligase activity molecular_function
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function
GO:0003714 transcription corepressor activity molecular_function

KEGG:

id description
ko04121 Ubiquitin system

ZFIN:

id description
ZDB-GENE-081107-14 Predicted to enable SUMO ligase activity and transcription corepressor activity. Predicted to be involved in negative regulation of transcription initiation from RNA polymerase II promoter; positive regulation of transcription by RNA polymerase II; and protein sumoylation. Predicted to be active in nucleus. Orthologous to human ZNF451 (zinc finger protein 451).

Ensembl:

ensembl_id ENSDARG00000076939

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00012358 False 551 nonsense_mediated_decay 0.44 5 1409786 1414805
TCONS_00012359 False 2931 mRNA 0.49 13 1409786 1427240
TCONS_00012360 True 3127 mRNA 0.46 6 1414239 1423008

Neighbor

gene id symbol gene type direction distance location
XLOC_006355 bag2 coding downstream 1011 1404924 ~ 1408775 (-)
XLOC_006354 NA coding downstream 8194 1394938 ~ 1401592 (-)
XLOC_006353 si:ch73-52p7.1 coding downstream 59864 1345276 ~ 1349922 (-)
XLOC_006351 NA coding downstream 67904 1270928 ~ 1341882 (-)
XLOC_006352 NA coding downstream 101766 1305351 ~ 1308020 (-)
XLOC_006357 NA coding upstream 389850 1817090 ~ 1823981 (-)
XLOC_006358 gfral coding upstream 563730 1990970 ~ 2010259 (-)
XLOC_006359 hcrtr2 coding upstream 592975 2020215 ~ 2060713 (-)
XLOC_006360 fam83b coding upstream 643128 2070368 ~ 2112450 (-)
XLOC_006361 mlip coding upstream 723278 2150518 ~ 2215213 (-)
XLOC_006338 rn7sk misc downstream 583561 825904 ~ 826225 (-)
XLOC_006471 BX537274.2 misc upstream 8837501 10264741 ~ 10264905 (-)
XLOC_006350 NA non-coding downstream 140181 1260486 ~ 1269605 (-)
XLOC_006346 NA non-coding downstream 283685 1120189 ~ 1126101 (-)
XLOC_006364 NA non-coding upstream 921322 2348562 ~ 2350355 (-)
XLOC_006366 NA non-coding upstream 1074843 2502083 ~ 2503176 (-)
XLOC_006368 BX571701.2 non-coding upstream 1423899 2851139 ~ 2853078 (-)
XLOC_006369 BX571701.1 non-coding upstream 1427085 2854325 ~ 2856272 (-)

Expression


Co-expression Network