G2782


Basic Information

Item Value
gene id G2782
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 12290122 ~ 12290466 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU4024
tttggaaataggctcattctctaaCTCCCCAGAGTtgataagttgagttttaccgtttttgactCGATCTCCGGGTCtagcgatagcacttttagcatagcttagcatagacaATTGAATCCATTTTGACCAGCATTCAAAATTTGGgagagttggagaatgagcctggAAAAAATCGGCGTGTTCCTTTAAACTTCATATGAGCTAACTTAATCCCTAACTAATGTTAGTTCTTTATTTCCAACccattctgttttatttgactCGATGAGAACATTTTATTGcctttataaagtaaataaccCACAACACTCATAAATAATCTTCTTTCTGTTAAGTCATTTT

Function

GO: NA

KEGG:

id description
ko05143 African trypanosomiasis

RNA

RNA id representative length rna type GC content exon number start site end site
TU4024 True 345 lncRNA 0.35 1 12290122 12290466

Neighbor

gene id symbol gene type direction distance location
spock3 spock3,LOC107702382 coding upstream 133544 12130310 ~ 12156578 (+)
prss12 prss12,LOC107551563,LOC107656290,LOC107754187,LOC107750419,LOC107591549,LOC107702379 coding upstream 331966 11927441 ~ 11958156 (+)
apbb2b apbb2,apbb2b,LOC107656070,LOC107551575 coding upstream 380108 11867305 ~ 11910014 (+)
uba6 si:dkey-82j4.2,LOC107656020,LOC107551577,LOC107702375,LOC107591547 coding upstream 424984 11852225 ~ 11865138 (+)
fnip2 si:ch211-42i9.8,LOC107754161,LOC107656063,LOC107750416,LOC107702372,LOC107591544 coding upstream 454420 11819256 ~ 11835702 (+)
med28 med28,LOC107702388,LOC107656902 coding downstream 20053 12310519 ~ 12312515 (+)
LOC122351007 NA coding downstream 28149 12318615 ~ 12322458 (+)
LOC122342830 NA coding downstream 37670 12328136 ~ 12331902 (+)
pax5 pax5,LOC107702396 coding downstream 259462 12549928 ~ 12590890 (+)
anxa5b anxa5b,LOC107709458,LOC107671923,LOC107548361,LOC107702401 coding downstream 590653 12881119 ~ 12887654 (+)
G2767 LOC107548350,LOC107745058 non-coding upstream 39344 12248498 ~ 12250778 (+)
G2711 NA non-coding upstream 367757 11920739 ~ 11922365 (+)
G2648 NA non-coding upstream 440845 11848131 ~ 11849277 (+)
G2651 NA non-coding upstream 442110 11793561 ~ 11848012 (+)
G2645 NA non-coding upstream 519537 11769443 ~ 11770585 (+)
G2790 gria2a,LOC107591557,LOC107655932,LOC107750427,LOC107548351,LOC107702389 non-coding downstream 47176 12337642 ~ 12348940 (+)
G2806 NA non-coding downstream 99646 12390112 ~ 12392194 (+)
G2791 NA non-coding downstream 102144 12392610 ~ 12395729 (+)
G2820 NA non-coding downstream 136079 12426545 ~ 12437258 (+)
G2821 NA non-coding downstream 149266 12439732 ~ 12440108 (+)
LOC122350793 zbtb5,LOC107656143,LOC107702373,LOC107591545 other upstream 446062 11837606 ~ 11844060 (+)
tmem192 tmem192,LOC107754158,LOC107551580,LOC107656254,LOC107591541,LOC107702369,LOC107750450 other upstream 507052 11773956 ~ 11783070 (+)
fbxo10 fbxo10,si:dkey-245p14.2,LOC107656048,LOC107702368,LOC107754157,LOC107591540,LOC107750413 other upstream 565222 11711940 ~ 11724900 (+)
LOC122347856 cpe,LOC107745061,LOC107548348,LOC107591555,LOC107702282,LOC107750458 other upstream 1308766 10844956 ~ 10981356 (+)
tlr3 tlr3,LOC107754132,LOC107562740,LOC107656973,LOC107746023,LOC107702346 other upstream 1800038 10483640 ~ 10490084 (+)
kdm4c kdm4c,LOC107702398,LOC107548355,LOC107570226,LOC107655842,LOC107750465,LOC107709452 other downstream 354213 12644679 ~ 12658507 (+)
dnah6 dnah6,LOC106610484 other downstream 368796 12659262 ~ 12724458 (+)
rhoh rhoh,LOC107548321,LOC107598269,LOC107757583 other downstream 912593 13203059 ~ 13205716 (+)
slit2 slit2,LOC107700301,LOC107695646 other downstream 1225742 13516208 ~ 13585981 (+)
G3187 gatb,LOC107695556,LOC107695902 other downstream 1823965 14114431 ~ 14118433 (+)

Expression


Co-expression Network