G2791


Basic Information

Item Value
gene id G2791
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 12392610 ~ 12395729 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU4041
GTAGATTAAGTTGTGTGTACTCACTGTGGCGATACAGTAGGGCAGATTGTTTTTGCAGCCGGGACAGAGCAGCTCACACTCAGGCAGGCTGAAGCCGCAGTAGGGACAGGGAGagctctcctcctccacctcagAAGTATCTGGGCGACTGAcgtgaaaaacagaaaaaagtcaaTGATTGGGTCGCGGCAAACACTTGTGCTGCGTTTGTGCAAATTCAGTCCAAATTTGTTTAGCAGTTGTTGTGGACAATGGTGGGCTCAGAAGTCAAAAAGGTCAAGAACCACTGGTTTAAACAGAACCTAAATGCACTGAAATAGCATTCtgctaaaacaaaacagacaacgTTCGCAAATAAATTACGTTATAAATTGGAGCATTTAATTCTTATTAGATGTGTTTCCTTGTGTATTACCGGACCATGGCCTCTATCTTCTTCTTGTATTTGAGATCAATCTTGTTGCGATACTCTGGTCTCATCAGCATAGAGGCAAAACTGAAGGCAGAGTTCCTTAGTCCAGCACGATGACATTCAATAACCGCTGATGTGAGGATGGGGACAATGTCTGTAggccataaacacacacacatacactgctTTATGCTACATTAAAGGTGGACCCAGTGCCTCCAAAGTTAGTTTAAAAAGGCATAATGCTCAGGGAGACCACAGAGACTATGAAGGAGATGCCTCAATATGCTGGATAAACTGCTGTTGTTCAGTGATGTCAGGGTCATTATATAATCAGCTTACAAGGCACAAGAGATCCAAGTGATCTATTATTGACTGTTAAACCAGTAAAAGAGATGCAGGATTGTCATCTCATCTTTATATAAGAAAATGTTTAGTGGATTTGACAGCCATAACAGTACTGaggtatgtactgtatatgtgtgtgtgtgtgtgtgtgtgtgggtaggTGCACAAAAGCAGCTCACGGGATGGGAATTTGCTGATGTTGTTGGAGACGCGGATAAGCATTCGTGCCCCCTTTAAATGATCTCCTCTTTTAACATGGATCTGAAAGAATATAAACATTCatgacataaatataaaatactaatattaaactGGGGcagcaaaaataatttgaacacTTAGTCGCTTAAACCaaacataaatgtatgtttGAAATATTAGATACAAGACAAGTGATGAAAAACCAACCGGTATCTAGGtgatttttttgtgaagttAGTTTCCCCTCAAGTTCACACGCGTGTCTTTGCGGAGTAGCCAGTATTTTGTCACATTAATATTAGACAACCAAAAggtttaataatactttaagaTTAACAATATGTTATAGtgtattactgaaataaatgatataaactATAGTTCAGATGTTTGGGGTTGGGaagattttttcaaaaatgtcttgTACTCACCaagtttagtttatttgataaaaaaataaaacagaataaaacagaaacactgtCAAATActtacaattacaatttaaaagaacttttCTACATCTATGTGACAATGCAAAAATCCCTACCTTCACCTTTAACATATTACAAACCTTTAAACAGTAGTAATACAACACTCGGTTTGACATTTTGTAACATAATGCAaaaattttattctatttttatgcaaataatatatgttaaaatgtgacATACAGCAAGCATGTGTTTCCCACCTTCACTAGTATGTAGCTGTGCAGGATCATCAGGTTTGTGGCCATCTCTGCTGGGATCTTAATGTGCTGTGTCTGAAGCTCAGCGTACATGCTGAACAAAACATCATGGGCATTCCTGTAGTTTCCTATagcacataacacacacacacaaacacaccggGAATTCCCTAAGAATGTATTATCTTCTTATTTTCCCACTTTGAGTCTGGATTGGCGCAACGTGCTCCTAAAAAACTACACTTAACACGATAACAGTGAATGACAATCTACAACTCTACATGGATAACCCGAAAGCACTGAAATCAGACCTGCAGATTGCTCCTCTCTGGCAATAATAATAGCAGTTCTTGCTGCCTCTCTGTACTGTTTGAGAGCCATGTACAACCGGAACAGATATTTTGCATCCTAGGAAAGAGCAGAACCAACAGACATTATCTAGTCGAAACACTTTTTCTGATAACACACTTCTGACGCTACATACTATATATGTTGCAACCAAATAAGGTAGACCACCCTATACATTTCCTCAGAATCACACTATTTTACCTAAACTGTTCAAATaactacaaaacaaacacacacatttagaattttaagtaatgaagcaatcaaaacacaaacacaatttttactttgcacacacacacacacacacacacacagaagtgcCTTCTGCTGGGTCACCACAAAGAGAAACATCAGCAAATGCAATGAGCTACTCACGGCAAGAGACTACACACATGCAGTGACACGCCAGAAAGAGAGGATGAGTGAGAGATGATGAGTGTACGGACAAAAGGAACCCATCAGATGATGAGTGCAACAACATATTTATAGTACATAATTGCAAAATTCAACCAATACTTGTTTaaatacagtcatttaaatgtttcagtgcCGATATTTTAAGAGAACCCacacatttacaaaagaaaaagtcaaactTGATAAAATCCTAAAGTAACGGGCAATGTTAGAGCTGCCTGGAGCCACTAGATAACCCttgtaatttataaaatattaaaagaaacctGGAGCACTAAGCAATGATGAACCCAGCAGGGTCATGGAACAAACAAGAAATAAGCGTTTATGGACCTCAAATTCAGATGTTGTGATCAGCTATAGCAATACAacccacatacagtatattaatatttcgtGTGGTCACATTGCACAactgttgaaatgttttaggtcagtaagatttaagGGATTTTAAGGTTCCCCTCACCATTGCTACATTACTTGAAGTGCAAACAATAATGATTTGAAGTGTTGTCTTTACTGCAGTCTTTacggtcacatgatccttaattTTTTGTGCTGCTTGACAGTTTCtgataatttttattttaggacttatttttttgtttttctgcaacAATGTAGAAGCCTTTAATCAAatgtttgatcaatttattacatcctgctaaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4041 True 3100 lncRNA 0.37 2 12392610 12395729

Neighbor

gene id symbol gene type direction distance location
LOC122342830 NA coding upstream 60708 12328136 ~ 12331902 (+)
LOC122351007 NA coding upstream 70152 12318615 ~ 12322458 (+)
med28 med28,LOC107702388,LOC107656902 coding upstream 80095 12310519 ~ 12312515 (+)
spock3 spock3,LOC107702382 coding upstream 236032 12130310 ~ 12156578 (+)
prss12 prss12,LOC107551563,LOC107656290,LOC107754187,LOC107750419,LOC107591549,LOC107702379 coding upstream 434454 11927441 ~ 11958156 (+)
pax5 pax5,LOC107702396 coding downstream 154199 12549928 ~ 12590890 (+)
anxa5b anxa5b,LOC107709458,LOC107671923,LOC107548361,LOC107702401 coding downstream 485390 12881119 ~ 12887654 (+)
zmynd10 zmynd10,LOC107702405 coding downstream 503897 12899626 ~ 12905289 (+)
gtf2e2 gtf2e2,LOC107671915,LOC107548363,LOC107750445,LOC107702408 coding downstream 571036 12966765 ~ 12977670 (+)
si:dkey-92j12.5 LOC107757600,LOC107709437,LOC107709438,LOC107548306 coding downstream 690120 13085849 ~ 13123735 (+)
G2806 NA non-coding upstream 416 12390112 ~ 12392194 (+)
G2790 gria2a,LOC107591557,LOC107655932,LOC107750427,LOC107548351,LOC107702389 non-coding upstream 43670 12337642 ~ 12348940 (+)
G2782 NA non-coding upstream 102144 12290122 ~ 12290466 (+)
G2767 LOC107548350,LOC107745058 non-coding upstream 141832 12248498 ~ 12250778 (+)
G2711 NA non-coding upstream 470245 11920739 ~ 11922365 (+)
G2820 NA non-coding downstream 30816 12426545 ~ 12437258 (+)
G2821 NA non-coding downstream 44003 12439732 ~ 12440108 (+)
G2847 NA non-coding downstream 101912 12497641 ~ 12497869 (+)
G2918 NA non-coding downstream 399138 12794867 ~ 12873669 (+)
LOC122348548 NA non-coding downstream 459033 12854762 ~ 12859351 (+)
LOC122350793 zbtb5,LOC107656143,LOC107702373,LOC107591545 other upstream 548550 11837606 ~ 11844060 (+)
tmem192 tmem192,LOC107754158,LOC107551580,LOC107656254,LOC107591541,LOC107702369,LOC107750450 other upstream 609540 11773956 ~ 11783070 (+)
fbxo10 fbxo10,si:dkey-245p14.2,LOC107656048,LOC107702368,LOC107754157,LOC107591540,LOC107750413 other upstream 667710 11711940 ~ 11724900 (+)
LOC122347856 cpe,LOC107745061,LOC107548348,LOC107591555,LOC107702282,LOC107750458 other upstream 1411254 10844956 ~ 10981356 (+)
tlr3 tlr3,LOC107754132,LOC107562740,LOC107656973,LOC107746023,LOC107702346 other upstream 1902526 10483640 ~ 10490084 (+)
kdm4c kdm4c,LOC107702398,LOC107548355,LOC107570226,LOC107655842,LOC107750465,LOC107709452 other downstream 248950 12644679 ~ 12658507 (+)
dnah6 dnah6,LOC106610484 other downstream 263533 12659262 ~ 12724458 (+)
rhoh rhoh,LOC107548321,LOC107598269,LOC107757583 other downstream 807330 13203059 ~ 13205716 (+)
slit2 slit2,LOC107700301,LOC107695646 other downstream 1120479 13516208 ~ 13585981 (+)
G3187 gatb,LOC107695556,LOC107695902 other downstream 1718702 14114431 ~ 14118433 (+)

Expression


Co-expression Network