G2806


Basic Information

Item Value
gene id G2806
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 12390112 ~ 12392194 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU4059
caaaaattaaatttcttcTGTGCTGCTGTTTTAGCATATCAGTGATACATATGAggtataatacacacacacagaatatatataagaaacactgaataaaactCATTCTCTATTTACATACATGAAGTACTAGTATATAAAACGTTGGTGCAGAGAACCCAGTACATGTTCAGCACAACtaggaaataaaacaatacaattgtTTCAGAATTTTTGAAGCCGTTCTGCTCACAGCATGGCACAACGCCAGCATGCTGCAGAGGAgacacacaaactcactctcactgtctctcacacacacacacacacacacacacacacacactggacagCTTCATGACGGTCTTTACGGATTACAAACTTACCTCAGCATTTCAGAAGCTGTAAAACATCAGCTTTCACTCctgtattacacacacacacacacacacacacacacacaatcttgtGTCAGATGTGGTGGTTTCACAGGTGAATTATGCTTTAAAGAATACAATTACGGTGAGTGACTATCATTCTAATAAAAGTGATCATTACACAATGTCATCCGCTTAGATACTACAAAACAAGACAGATGCTATGCCAAATATGGGACATGCTTTCATGCCTTCTACAcatatacaacacacacacacacacacatacaccatcTGTCCAGGGCTGACAGGAACACAATTCATCTTCTGCTCGGACAAATTTGACCACTACAAATGAAGAATGGAGCTCACTGTTTGTATGCGGTGTCCACAGACACAGCCAGGGCGTGTATTTTCAAtccacattaaaatattaagtatgaaaacatttgtgccTTAAGAGATTTATTGCAAAACTGATTGGTtaacaacattcttcaaaatatctttatttgtgttacaCAGAAGCACGTcatattaaatttgaaatatcccttaaaaagaacaaacaagaaTCTCAAAGCAAATATACTAGCAAATAAATCAGATTTCACAAACTCCGGTGATTACAATTACACTATTTTAGTTCATTAAAGcttattcaaaatgcatttgacCTAAATCTCAAAAGCAGTAAGGTATgggtaaaatttaaaaaacaaaactagagcCTCTctatattaaaaactttaagGCCACGTGTAAAATGAACGGACAGTCCAGCTCAACATAAATGTCAGCACTTGGGTGGTTAGATTAACGGTCTTTCTCCTTTCATTAGCTCACACTGCAGTGCTGAACTCTTGTGGCCAAGCTAAAAAACAGCAGCACGAATCACTCGGACTAAAGCTGGTTGTGTCATTTTCTTCTTTACCACTTTAATGTGTGAGACAACAGTTATAGGTTGATGTCCCTCAAAAGTATAGATGCTTTTTTCAACATTGCTTTTGAGTTTGAGCTGCCTGATATAACAACACAGATTTAGTAAATGAGTTTAAGACAAGGCTACCTGTTTGTTTGACCAGTGGCAGATGGAGGAGGGTTTTGGAGAATATCATGTCGTCCTTATTATAAATGTTGGTAGTTGCCTCTGTACGTTTAGCCCACATCATCTACCGTagttataaatgcatgtatacacatttacaaatgtacaaaaaagctcacatattttctttttttattctgcattttaaaattaataatataacatgaTTGCGAATTGCTACAatattgatgaataaataatatttttgtattttcagtaaAAGAATATAATTTCTTGCTtcttaaaaacaagaaacaaggGGCACAGTTACACAATTCATCCATTTTAGTTTTGTCCACAAAAATAATCATGAAACAATTTTATTCAATTAGTATTGTTCATTTACTAAAACCTTAAGCAGACAGattatgcaaaatgcaaaacagattcatttaaTTAGAGGTCTCCGATTTTGGCCCCCCATTGTTTGAGCAAAAGAAGCAAGAGATTTTTCTCATTACCCGTTCTTTTCcctttttcatgctttttgtGGATTTCAGCGCTCCAGTTGGTCCTGCTGTAGATATCTGGAGCAGTCTGAAACTTTTTTCACCTCACTGACATTTACGGTCTCAGAACACATGGGGCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4059 True 2055 lncRNA 0.39 2 12390112 12392194

Neighbor

gene id symbol gene type direction distance location
LOC122342830 NA coding upstream 58210 12328136 ~ 12331902 (+)
LOC122351007 NA coding upstream 67654 12318615 ~ 12322458 (+)
med28 med28,LOC107702388,LOC107656902 coding upstream 77597 12310519 ~ 12312515 (+)
spock3 spock3,LOC107702382 coding upstream 233534 12130310 ~ 12156578 (+)
prss12 prss12,LOC107551563,LOC107656290,LOC107754187,LOC107750419,LOC107591549,LOC107702379 coding upstream 431956 11927441 ~ 11958156 (+)
pax5 pax5,LOC107702396 coding downstream 157734 12549928 ~ 12590890 (+)
anxa5b anxa5b,LOC107709458,LOC107671923,LOC107548361,LOC107702401 coding downstream 488925 12881119 ~ 12887654 (+)
zmynd10 zmynd10,LOC107702405 coding downstream 507432 12899626 ~ 12905289 (+)
gtf2e2 gtf2e2,LOC107671915,LOC107548363,LOC107750445,LOC107702408 coding downstream 574571 12966765 ~ 12977670 (+)
si:dkey-92j12.5 LOC107757600,LOC107709437,LOC107709438,LOC107548306 coding downstream 693655 13085849 ~ 13123735 (+)
G2790 gria2a,LOC107591557,LOC107655932,LOC107750427,LOC107548351,LOC107702389 non-coding upstream 41172 12337642 ~ 12348940 (+)
G2782 NA non-coding upstream 99646 12290122 ~ 12290466 (+)
G2767 LOC107548350,LOC107745058 non-coding upstream 139334 12248498 ~ 12250778 (+)
G2711 NA non-coding upstream 467747 11920739 ~ 11922365 (+)
G2648 NA non-coding upstream 540835 11848131 ~ 11849277 (+)
G2791 NA non-coding downstream 416 12392610 ~ 12395729 (+)
G2820 NA non-coding downstream 34351 12426545 ~ 12437258 (+)
G2821 NA non-coding downstream 47538 12439732 ~ 12440108 (+)
G2847 NA non-coding downstream 105447 12497641 ~ 12497869 (+)
G2918 NA non-coding downstream 402673 12794867 ~ 12873669 (+)
LOC122350793 zbtb5,LOC107656143,LOC107702373,LOC107591545 other upstream 546052 11837606 ~ 11844060 (+)
tmem192 tmem192,LOC107754158,LOC107551580,LOC107656254,LOC107591541,LOC107702369,LOC107750450 other upstream 607042 11773956 ~ 11783070 (+)
fbxo10 fbxo10,si:dkey-245p14.2,LOC107656048,LOC107702368,LOC107754157,LOC107591540,LOC107750413 other upstream 665212 11711940 ~ 11724900 (+)
LOC122347856 cpe,LOC107745061,LOC107548348,LOC107591555,LOC107702282,LOC107750458 other upstream 1408756 10844956 ~ 10981356 (+)
tlr3 tlr3,LOC107754132,LOC107562740,LOC107656973,LOC107746023,LOC107702346 other upstream 1900028 10483640 ~ 10490084 (+)
kdm4c kdm4c,LOC107702398,LOC107548355,LOC107570226,LOC107655842,LOC107750465,LOC107709452 other downstream 252485 12644679 ~ 12658507 (+)
dnah6 dnah6,LOC106610484 other downstream 267068 12659262 ~ 12724458 (+)
rhoh rhoh,LOC107548321,LOC107598269,LOC107757583 other downstream 810865 13203059 ~ 13205716 (+)
slit2 slit2,LOC107700301,LOC107695646 other downstream 1124014 13516208 ~ 13585981 (+)
G3187 gatb,LOC107695556,LOC107695902 other downstream 1722237 14114431 ~ 14118433 (+)

Expression


Co-expression Network