G2847


Basic Information

Item Value
gene id G2847
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 12497641 ~ 12497869 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU4122
TCAGGAATgagattaaaacaataattatgatCAGCATTTATAATTGGATAATTTGTGATTTCAGGCCAaacttattttaactaaaagtattaagaatgttatttaatttcatttatgtttttggaaATTGATATATGTTAAATTAGAtgctaaaattactaaaattaaaataatatattaaataattaattaaaaatggcaaaaatgacaGCTtactagaaataaaaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4122 True 229 lncRNA 0.19 1 12497641 12497869

Neighbor

gene id symbol gene type direction distance location
LOC122342830 NA coding upstream 165739 12328136 ~ 12331902 (+)
LOC122351007 NA coding upstream 175183 12318615 ~ 12322458 (+)
med28 med28,LOC107702388,LOC107656902 coding upstream 185126 12310519 ~ 12312515 (+)
spock3 spock3,LOC107702382 coding upstream 341063 12130310 ~ 12156578 (+)
prss12 prss12,LOC107551563,LOC107656290,LOC107754187,LOC107750419,LOC107591549,LOC107702379 coding upstream 539485 11927441 ~ 11958156 (+)
pax5 pax5,LOC107702396 coding downstream 52059 12549928 ~ 12590890 (+)
anxa5b anxa5b,LOC107709458,LOC107671923,LOC107548361,LOC107702401 coding downstream 383250 12881119 ~ 12887654 (+)
zmynd10 zmynd10,LOC107702405 coding downstream 401757 12899626 ~ 12905289 (+)
gtf2e2 gtf2e2,LOC107671915,LOC107548363,LOC107750445,LOC107702408 coding downstream 468896 12966765 ~ 12977670 (+)
si:dkey-92j12.5 LOC107757600,LOC107709437,LOC107709438,LOC107548306 coding downstream 587980 13085849 ~ 13123735 (+)
G2821 NA non-coding upstream 57533 12439732 ~ 12440108 (+)
G2820 NA non-coding upstream 60383 12426545 ~ 12437258 (+)
G2791 NA non-coding upstream 101912 12392610 ~ 12395729 (+)
G2806 NA non-coding upstream 105447 12390112 ~ 12392194 (+)
G2790 gria2a,LOC107591557,LOC107655932,LOC107750427,LOC107548351,LOC107702389 non-coding upstream 148701 12337642 ~ 12348940 (+)
G2918 NA non-coding downstream 296998 12794867 ~ 12873669 (+)
LOC122348548 NA non-coding downstream 356893 12854762 ~ 12859351 (+)
G2948 NA non-coding downstream 438708 12936577 ~ 12937470 (+)
G2967 NA non-coding downstream 525559 13023428 ~ 13155797 (+)
G2981 NA non-coding downstream 626003 13123872 ~ 13124595 (+)
LOC122350793 zbtb5,LOC107656143,LOC107702373,LOC107591545 other upstream 653581 11837606 ~ 11844060 (+)
tmem192 tmem192,LOC107754158,LOC107551580,LOC107656254,LOC107591541,LOC107702369,LOC107750450 other upstream 714571 11773956 ~ 11783070 (+)
fbxo10 fbxo10,si:dkey-245p14.2,LOC107656048,LOC107702368,LOC107754157,LOC107591540,LOC107750413 other upstream 772741 11711940 ~ 11724900 (+)
LOC122347856 cpe,LOC107745061,LOC107548348,LOC107591555,LOC107702282,LOC107750458 other upstream 1516285 10844956 ~ 10981356 (+)
tlr3 tlr3,LOC107754132,LOC107562740,LOC107656973,LOC107746023,LOC107702346 other upstream 2007557 10483640 ~ 10490084 (+)
kdm4c kdm4c,LOC107702398,LOC107548355,LOC107570226,LOC107655842,LOC107750465,LOC107709452 other downstream 146810 12644679 ~ 12658507 (+)
dnah6 dnah6,LOC106610484 other downstream 161393 12659262 ~ 12724458 (+)
rhoh rhoh,LOC107548321,LOC107598269,LOC107757583 other downstream 705190 13203059 ~ 13205716 (+)
slit2 slit2,LOC107700301,LOC107695646 other downstream 1018339 13516208 ~ 13585981 (+)
G3187 gatb,LOC107695556,LOC107695902 other downstream 1616562 14114431 ~ 14118433 (+)

Expression


Co-expression Network