G3578


Basic Information

Item Value
gene id G3578
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 15306648 ~ 15306904 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU5149
GGAGAGTCTACATTCATGTAAGGATAGGTTTGTTGCTTGCCCTCTAGCACAAATGTATTCTGGGAATGTTTATGGTAAACGTGTTAACTAGCAGTGAATGAAATCTGCACCTCCTGATGCGCTAATGAATGCAGTGGTTTAACAAGCTTCAACCTCTGATAATGTATGCATGTCTACCTGTGCGTGACAGGTGAGCAAGTATAGGTAAAGAACACATTAAGTCATTAAATAAGCATCTGCAGAAACATACAATCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU5149 True 257 lncRNA 0.45 1 15306648 15306904

Neighbor

gene id symbol gene type direction distance location
cntln cntln,LOC107595061 coding downstream 128202 15097021 ~ 15178446 (-)
sh3gl2a sh3gl2,LOC107595059,LOC107714635,LOC107757631,LOC107700329,LOC107695241,LOC107598242 coding downstream 227238 15063437 ~ 15079410 (-)
foxe1 foxe1,LOC107598243,LOC107757598,LOC107700287 coding downstream 253772 15050819 ~ 15052876 (-)
trmo trmo,LOC107580156 coding downstream 268957 15033169 ~ 15037691 (-)
anp32b anp32b,LOC107595056 coding downstream 277290 15024645 ~ 15029358 (-)
pspc1 pspc1 coding upstream 220250 15527154 ~ 15581541 (-)
dnajb14 dnajb14 coding upstream 278675 15585579 ~ 15626410 (-)
sugt1 sugt1,sgut1 coding upstream 325161 15632065 ~ 15650309 (-)
snapc3 snapc3 coding upstream 394205 15701109 ~ 15709846 (-)
spp2 spp2,LOC107654271,LOC107707843,LOC107588827,LOC107719734,LOC107556720 coding upstream 759823 16066727 ~ 16069295 (-)
G3577 bnc2,LOC107737409,LOC107737408,LOC107678088,LOC107595060 non-coding downstream 403 15303988 ~ 15306245 (-)
G3572 bnc2,LOC107595060,LOC102789865 non-coding downstream 31337 15274884 ~ 15275311 (-)
G3570 NA non-coding downstream 76895 15229336 ~ 15229753 (-)
G3546 NA non-coding downstream 302360 15001285 ~ 15004288 (-)
G3502 NA non-coding downstream 458072 14848025 ~ 14848576 (-)
G3581 NA non-coding upstream 3431 15310335 ~ 15310542 (-)
G3582 NA non-coding upstream 4000 15310904 ~ 15311170 (-)
G3583 bnc2,LOC107737409,LOC107595060,LOC107678088,LOC107598241,LOC107700330 non-coding upstream 6542 15313446 ~ 15317623 (-)
G3587 NA non-coding upstream 39446 15346350 ~ 15346691 (-)
G3588 NA non-coding upstream 42471 15349375 ~ 15349586 (-)
G3571 NA other downstream 75762 15230539 ~ 15230886 (-)
G3515 coro2a other downstream 277028 15020642 ~ 15029620 (-)
G3522 NA other downstream 381285 14925085 ~ 14925363 (-)
cxxc4 cxxc4,LOC107695705 other downstream 387862 14898201 ~ 14918786 (-)
G3491 gpank1 other downstream 557673 14746829 ~ 14748975 (-)
alg11 alg11,LOC107556718,LOC107588826,LOC107705036 other upstream 762273 16069177 ~ 16073920 (-)
march4l zgc:153256,march9,LOC107719730,LOC107654275,LOC107556712,LOC107707834,LOC107699089 other upstream 852788 16159692 ~ 16198263 (-)
igf2bp2b igf2bp2b,LOC107704342,LOC107573191,LOC107699092,LOC107556709 other upstream 1027298 16334202 ~ 16359025 (-)
mzt1 mzt1,si:dkey-15d12.2,LOC107556706 other upstream 1140184 16447088 ~ 16448519 (-)
LOC122330431 lsm6 other upstream 2127813 17434717 ~ 17436707 (-)

Expression


Co-expression Network