sugt1 (sugt1,sgut1)


Basic Information

Item Value
gene id sugt1
gene name sugt1,sgut1
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 15632065 ~ 15650309 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242847.1
ATAGTTCTTCATTCCGGAAGTAGAGCGAGGTTGACAGGCCCACATGTTTACTTCCTTTAACGTCTCTTTCCTTTCAGAACTTTCTAGAGCTTAAGAGAGAAAGTACGAAGAGTGGACACATGGCAACCAGCGGGAGTTTCTCTGACGGTTTCATAGACACGGATCCACAGAGAGCTCTTGAGGAGCTAAATGCAGCGTTGGTAGAGAAAGCTGATAATGCTGAATGGCTTTGCCAGCGAGCTTATGCCTATATACTATTGAAAGAGTATACAAaaGCTATTGAAGATGCTAAAAAGGCCAACCAGCTGCATCCAGGTCTGGCACTTGCCTTTTTAAGAATAGGaaTTGCGGAGTATCACCTTCATAACTTCGTTAATGCTCATCAGGCCCTCACAGCTGGAAAAGAGCTTGATTgcTCTATTGAAGGTTTTCAAACATGGATTCAGCACTGTGAGAATAAAATGGCAACACACATTCCAAACCAAACCACAGATTCGcaaaagcaaaCTACAACCCCGTTTTACAAACATGACTGGTACCAGACAGAGTCTCAAGTTGTAGTGACCATCATGGTAAAAAATGCCAAGAAGGAGGACGTAACAGTCACATTTGGGGAGACGGAGGTGACAGCTGTGGTAAAGCTTCCATCTGGAGAAGATTACTGCCTAATGGTCCCACTTCTGCATCCTATTGTCCCACATCAGAGCACACACAGGATCCTTTCAACAAAGatagaGATTAAGATGAAGAAGACTGCAGCTATACAGTGGGAGAAACTGCAGGGAGAATGCACACTTTCTAATGTGAAGCATCTTCCTCCGAACAATTACCCATCGTCCTCCCATTACACACGGAACTGGGACAAGGTGGTAGGTGAAataaaggaggaggaaaagaaTGAAAAGCTGGAGGGAGACGCTGCACTCAACAAGCTGTTTCAGCAAATCTACTCGGATGGTTCTGATGAAGTCAAGCGAGCAATGAACAAGTCCTTTATGGAATCAGGAGGCACGGTCCTCAGCACCAACTGGATGGATGTCGGTAAACGGAAAGTAGACATGAACCCTCCTGATGATGTAGagtggaaaaaatattaaaagcagtaAAGGATATCTCGCACCAATTGTTCTAATGTCTTTATGCTCTCCTTCATTTAGTCCCTGCTGCTTTTTCAATtgacacttttttcttttttttgtaagtcCCACAATAGTTCTAGATTGTCCTGGACTAAAATGAGACTATAATGCAGTTTCAAATGTAAAGTTCTTTGTCTAAAATTAGTTTTAGTCTGGAAACAAACTAGCtcatattttaaacaatcacaaatgtataaaacattacacattaAAACAACTAAGCGTTCAGTATCTTTACTAAAAATCCTCTTTGGCCACACTGAATACGTCTTCACCTGTGAAACATTTGTGCTTCAGTTAATGGTGATCACCGTTTTAATGTACTTCATGCTTTCCTAAATATGATTTCtttatgttgtaaataaaattttcttgttttctga

Function

symbol description
sugt1 Predicted to be involved in protein stabilization. Orthologous to human SUGT1 (SGT1 homolog, MIS12 kinetochore complex assembly cochaperone).

NR:

description
protein SGT1 homolog isoform X1

GO: NA

KEGG:

id description
K12795 SUGT1, SGT1; suppressor of G2 allele of SKP1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242847.1 True 1522 mRNA 0.41 13 15632065 15650309

Neighbor

gene id symbol gene type direction distance location
dnajb14 dnajb14 coding downstream 5655 15585579 ~ 15626410 (-)
pspc1 pspc1 coding downstream 50524 15527154 ~ 15581541 (-)
cntln cntln,LOC107595061 coding downstream 453619 15097021 ~ 15178446 (-)
sh3gl2a sh3gl2,LOC107595059,LOC107714635,LOC107757631,LOC107700329,LOC107695241,LOC107598242 coding downstream 552655 15063437 ~ 15079410 (-)
foxe1 foxe1,LOC107598243,LOC107757598,LOC107700287 coding downstream 579189 15050819 ~ 15052876 (-)
snapc3 snapc3 coding upstream 50800 15701109 ~ 15709846 (-)
spp2 spp2,LOC107654271,LOC107707843,LOC107588827,LOC107719734,LOC107556720 coding upstream 416418 16066727 ~ 16069295 (-)
c1h3orf70 si:dkey-22o12.2,LOC107588819,LOC107732704,LOC107704345,LOC107699091,LOC107719729,LOC107556711,LOC108435969 coding upstream 658700 16309009 ~ 16321592 (-)
ubac2 ubac2,LOC107704341,LOC107732706,LOC107573193 coding upstream 721179 16371488 ~ 16387107 (-)
dachc dachc,dach1,LOC107732708,LOC107602747,LOC107719724,LOC107699095,LOC108435962 coding upstream 743228 16393537 ~ 16435858 (-)
G3653 NA non-coding downstream 35900 15595814 ~ 15596165 (-)
G3652 NA non-coding downstream 41186 15589872 ~ 15590879 (-)
G3602 NA non-coding downstream 113493 15518183 ~ 15518572 (-)
G3588 NA non-coding downstream 282479 15349375 ~ 15349586 (-)
G3587 NA non-coding downstream 285374 15346350 ~ 15346691 (-)
G3659 NA non-coding upstream 3629 15653938 ~ 15654151 (-)
G3677 LOC106572279,LOC106561082 non-coding upstream 44489 15694798 ~ 15695916 (-)
G3678 NA non-coding upstream 46276 15696585 ~ 15698305 (-)
G3679 NA non-coding upstream 48178 15698487 ~ 15699011 (-)
G3681 NA non-coding upstream 49401 15699710 ~ 15699962 (-)
G3571 NA other downstream 401179 15230539 ~ 15230886 (-)
G3515 coro2a other downstream 602445 15020642 ~ 15029620 (-)
G3522 NA other downstream 706702 14925085 ~ 14925363 (-)
cxxc4 cxxc4,LOC107695705 other downstream 713279 14898201 ~ 14918786 (-)
G3491 gpank1 other downstream 883090 14746829 ~ 14748975 (-)
alg11 alg11,LOC107556718,LOC107588826,LOC107705036 other upstream 418868 16069177 ~ 16073920 (-)
march4l zgc:153256,march9,LOC107719730,LOC107654275,LOC107556712,LOC107707834,LOC107699089 other upstream 509383 16159692 ~ 16198263 (-)
igf2bp2b igf2bp2b,LOC107704342,LOC107573191,LOC107699092,LOC107556709 other upstream 683893 16334202 ~ 16359025 (-)
mzt1 mzt1,si:dkey-15d12.2,LOC107556706 other upstream 796779 16447088 ~ 16448519 (-)
LOC122330431 lsm6 other upstream 1784408 17434717 ~ 17436707 (-)

Expression


Co-expression Network