XLOC_006580 (glud1a)


Basic Information

Item Value
gene id XLOC_006580
gene name glud1a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 22679084 ~ 22699024 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00012714
GTCAAGCAGAAAAAGGAGCCGTGGTGTCCGTTTATTCACCAGACATATTCACTTTCACTGTCATTTTTCCTTTTTAGAGActgtaaatttgtttgttttttagttcaGAACCATGTATAGGTATCTGGGAGAGCTCGTGACACGCGCAGCCGCCAACAGCGCACTGGCCTCGGTGTGCGTAGACTCCGCTCTGCCCGCTTCTGCGACTCTCCTGCGGGTACGCCGCTACAGCGAAGCGGTGGGAGAGAAGGACGATGACCCAAACTTCTTTAGGATGGTCGAGGGTTTCTTTGATCGCGGTGCGTCTATTGTGGAGGACAAACTTGTGCACGATTTGAAGACGAGAGAAACGCCCGAGCAGAAGAGGCACCGCGTCAGGGGGATCCTCAAGATCATCAAGCCCTGTAACCACGTCCTGTCCGTGTCCTTCCCCATCAAGAGAGACAACGGGGAATGGGAAATGATCGAGGGCTACAGAGCTCAGCACAGCCAGCACAGGACCCCGTGTAAAGGAGGTATCCGTTACAGCACAGAGGTCTCAGTGGATGAGGTTAAAGCCCTCGCCTCACTAATGACCTACAAATGTGCAGTTGTAGATGTGCCTTTTGGAGGAGCCAAAGCTGGTGTGAAAATTAACCCCAAGAATTACTCGGACACAGAATTGGAGAAGATCACAAGGAGGTTCACTATCGAGTTGGCTAAAAAAGGCTTCATTGGGCCTGGCATTGACGTTCCTGCCCCGGACATGAGCACAGGAGAGAGGGAAATGTCCTGGATTGCTGACACATATGCAAACACAATGGGCCATCATGATATCAATGCTCATGCCTGTGTGACCGGTAAGCCCATCAGCCAGGGTGGCATCCACGGCCGCATATCTGCCACAGGTCGAGGTGTCTTCCATGGCATTGAAAACTTTGTGAATGAGGCTGCTTACATGAGCCAGCTGGGTCTGACCCCTGGGTTTGGAGACAAGACGTTTGTCATTCAGGGCTTTGGTAATGTGGGTCTGCACTCCATGCGTTACCTACACCGCTACGGAGCGAAGTGTGTGGGTATTGGAGAACTGGATGGAAGCATCTGGAATCCCAATGGCATCGATCCAAAAGAGCTGGAAGACTATAAGCTGGCAAATGGCACTATTGTTGGCTACCCAGGGGCCACCGCGTATGAAGGCAACATTTTGGAAGCTGAGTGTGATATCCTGATCCCTGCTGCAAGTGAAAAACAGCTCACAAAGAAAAACGCCAACAATATCAAGGCCAAGatCATCGCTGAAGGAGCAAACGGCCCAACTACTCCTGAAGCAGACAAGATATTCCTAGAGAGGAATATCATGGTGATCCCGGACATGTACCTGAACGCTGGGGGTGTGACAGTCTCCTACTTCGAGTGGCTGAAGAATCTTAATCATGTCAGTTATGGCAGACTGACCTTCAAATATGAACGGGATTCAAACTACCATCTGCTAATGTCTGTCCAGGAGAGTCTGGAGAGGAAATTTGGGAAACATGGTGGAGCCATACCCATTGTTCCCACTTCTGATTTTCAAGAAAGGATTTCTGGGGCTTCTGAAAAGGACATTGTGCATTCGGGATTGGCTTACACGATGGAACGATCGGCCAGAcaaatcaTGCGCACAGCCAACCGGTATAACCTTGGGCTGGATCTGAGGACAGCAGCTTATGTCAACGCCATTGAGAAAGTCTTCAAAGTGTACCACGAGGCCGGCCTTACCTTCACATAGACCGTTGTATTATTCACTCGACACGGTATATCAGCGTCTGCCTCATCCACGCAGACCCGAGGTATATCACTTAAGCCCTCAGCTCCTCACGTTTACATTTTATACATCCAAATATAAATGTCATAACATTTATGCATGTAGTTACATGTAATCATTTCTAGTTCATCCTTTCAAATACACAAGGCTTTTAGAAAAGAGTTAGTAAAAGCCAAGTCCACACTCTTTGAACAAAGCAGAAAAAATCTATGATGTTGTGCTTTATCTTAATGCTGCtttgtaatgttttctttaatGTTTCATGTGTTTCTGAAGCTGTTACTGTGTATAAAAACACACTAAAGCCTTATAGCCTTATACTTGCACACTGTTGTTTGAAGATATTCTAGTTGGTTTCTTTCTTCCTCGCTCTTTTTGCCACAGATGTGGTCAATTGGGAAAGGGCTGCAGGATGAATCTCAGGCGTTTTATATCTGTTACCAAAAAATATAGCACACGCATTTCGAGTTTTGCTGCTTCTTGGGACAGATTTCAGTGATAaccaaaagtaatttttttttaattgtggccTTGACCttattggttatttttttaatttcacaataatatgCAATAAGgaatgtgtttggaaaaaaatgtttattttttacttcatatTAGGATTTAATATGAAgcgttaaaaaaaatctttgtacggccttttaaattttgtttaaaataaataaatagtcaatgAAA

Function

symbol description
glud1a Predicted to enable glutamate dehydrogenase (NAD+) activity. Predicted to be involved in glutamate catabolic process. Predicted to act upstream of or within cellular amino acid metabolic process. Predicted to be active in mitochondrion. Is expressed in several structures, including cardiovascular system; digestive system; nervous system; periderm; and pronephros. Human ortholog(s) of this gene implicated in familial hyperinsulinemic hypoglycemia 6; hyperinsulinism; and hypoglycemia. Orthologous to human GLUD1 (glutamate dehydrogenase 1).

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0006520 cellular amino acid metabolic process biological_process
GO:0006538 glutamate catabolic process biological_process
GO:0005739 mitochondrion cellular_component
GO:0016491 oxidoreductase activity molecular_function
GO:0004352 glutamate dehydrogenase (NAD+) activity molecular_function
GO:0016639 oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030114-2 Predicted to enable glutamate dehydrogenase (NAD+) activity. Predicted to be involved in glutamate catabolic process. Predicted to act upstream of or within cellular amino acid metabolic process. Predicted to be active in mitochondrion. Is expressed in several structures, including cardiovascular system; digestive system; nervous system; periderm; and pronephros. Human ortholog(s) of this gene implicated in familial hyperinsulinemic hypoglycemia 6; hyperinsulinism; and hypoglycemia. Orthologous to human GLUD1 (glutamate dehydrogenase 1).

Ensembl:

ensembl_id ENSDARG00000008816

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00012714 True 2482 mRNA 0.45 13 22679084 22699024

Neighbor

gene id symbol gene type direction distance location
XLOC_006579 mmrn2a coding downstream 32950 22619684 ~ 22646134 (-)
XLOC_006578 BX649385.1 coding downstream 483916 22191361 ~ 22195168 (-)
XLOC_006577 NA coding downstream 739119 21925701 ~ 21939965 (-)
XLOC_006576 si:dkey-191g9.5 coding downstream 939942 21712284 ~ 21739142 (-)
XLOC_006575 si:dkey-191g9.7 coding downstream 977761 21689267 ~ 21701323 (-)
XLOC_006581 psda coding upstream 41014 22740038 ~ 22774491 (-)
XLOC_006582 CR550304.1 coding upstream 79036 22778060 ~ 22784433 (-)
XLOC_006583 si:ch211-1n9.6 coding upstream 120461 22819485 ~ 22819667 (-)
XLOC_006584 pbld coding upstream 140797 22839821 ~ 22843805 (-)
XLOC_006585 BX530068.1 coding upstream 144806 22843830 ~ 22847484 (-)
XLOC_006471 BX537274.2 misc downstream 12414179 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 21852859 825904 ~ 826225 (-)
XLOC_006570 NA non-coding downstream 1531702 21146114 ~ 21147382 (-)
XLOC_006569 NA non-coding downstream 1599673 21076652 ~ 21079411 (-)
XLOC_006568 NA non-coding downstream 1947196 20729834 ~ 20731888 (-)
XLOC_006595 NA non-coding upstream 513735 23212759 ~ 23217818 (-)
XLOC_006597 NA non-coding upstream 709005 23408029 ~ 23411631 (-)
XLOC_006602 AL772289.1 non-coding upstream 1262268 23961292 ~ 23961406 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G77287 NA unknown CI01000012 null 13619276 ~ 13633819 (-)