CI01000000_11479843_11484323


Basic Information

Item Value
gene id CI01000000_11479843_11484323
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 11478027 ~ 11485062 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_11479843_11484323.mRNA
GTATAAATAATGTTCTAATACCTTGTATAGAGCTGGGTTGAAATATCGCGAGAACAGCGCCCCGCGATTTAGATCGCGGGAGAGAACGAACAGTGCATGTTGAATGGTAGCAGATGGAGAGAGGAGATGCACGCTCTGTAATCACCTGTGGCAATTTATGATGTTCGCTTCTGAACGTTCAGTAAAAAACAAGTGTTGTGATCACCCGAGCTCTTTGTCAGTGTCCTCTATACAGCGGTGATAAACTTAACGACAGAACAAAGCCAAGAACCCACGAAACAGCGCTGGGTAAGAACTGTGAAAATAGAGTATAACCAAAGTCCCTTTAAGACAAGTCATTTCACTCAGCTGCCATCTTTGAAACGCCTCTCGGGCACTCAAGTGCAGCTCCCATCTCTTTGAATAGAGAAACATCAAATTCTCATAAGCTGTTTGCCAAGCTTTCGATTAAATTTCATATTTGAAATCACCAATGAAATCTGACAACAACTGTCTCATGAATTTTGTTTCTAAACGCTCGAATCATGACGTCTCTTGTGCCTCATTTCGGAGGCGCGCGTCTGACTGTTTCTATAGGAACCAGAGCTTCTAAGGCAGCTGCAGTGACGCGATGACTTTACCAATCGGCGATTGGCTCTTATTTAGAAGGCGGGACTTATTCCGCCGTATTGCGCGTTACACTTTCTCCCATTCAGAACAATACGAGTGACGCGTCTTGTGTTATTCTAGTCTTTGGTATAACCCACAAGCGCGTTACAAATATATTAAAATAAACAAATATACAACAGGTATTTAATCTCACTTTATTAACCAATGTCTTTGCTGCTGACCTTCGATGATCCAATTCAACCATAATAACCAAAAATGGCTTTACATAAACATCACATGATCAGCCTGATTCATTTCACTTTTGATGTTAAAGGGCCATTTACATTTGCAAAAAAATGTGTTGTTATTAAAAAGCAAACAAGCAAGCCGAGCCCAGGTGAGAAAAAGTAATGTAATGCATTACTTTCCATAAAAAGTAACTAAATAACGCAATTAGTTACTTTTTTTAAGGAGTAACACAATATTGTAATGCATTACTTTTAAAAGTAACTGCATGTGACACTGAAGAGTAGGGTAATGGCCATTACAGAAAAAAAATAAAAATGTAAAATATACATAAAATATAAATTTAACCAATTATTTACTATTGTAATAATATTTTACAATATTGCTGCTTTTACTGTATTTTTGATCGAATAAATGCTGCTTAATTTAAAACTCATCACAGTAGATTTACTAGATTAATCGAACATAATAAAGATTTAAAGATTTGATAACAGATTGGGATGATACGCAGCATTAGTTATTGAACTCTTAACTTGATGAACATAACCTGCAGAAAGACAGCATGACCTGCAGATCATTAAATATCAGCATCCCTGACACCATGGGCTAATCAATAAGTGCACTGATAGGTTTTTGTTGTTGAGTTTTTTCACACAGGAGGGGGCTACACTAACCCAGAGGGGCTGCGGACAGATGCAGTGACAGTGGGGAGTGAGAAAAGTTAAAGATTCACCACACATCTGTTACTCTGCCACAGATCGGACTGTCAGGCACCTACCCCCGCTGTCTGCCGGCTTGCCCGCCTGCCTGGGTATGTCTGTCTGTCTGTCTTCCTGCCTGCTCCCCTTAATATGTGACTGCATGCTGTCCACCTGTCTCTCTGAATTTGATTCCTGCATGTGTCTTTTCTGCGTGCTCACCACACTGTCAGCCTAACTGACCAACTGCTTCCTGTTGTGTACATGTGTCCGCTTTCCCCTTAATGAGCGAGCACATCTTTAAACCGTACAGCACCTTCAATCACCCGCCTAACGAACCCCGCATTTTTTGCAACCGTCGCCTGACAACAGACTCTTTGTGTGGCAGCGGTTTCTTCGCAGATAAGATGTACGTACGTAAAGTGAGGACCTTCAGATGGGGAACAGAGAAGTTCAGGAAACACGAGTGGAGTCAGGAGCGGAGAAGAGCGCATGTCCTCTTGGGTGTGCTGAATGGGCCTCATCCCCCGCTGGGTGCAGTGGTACCTAATTTACTTTCGCCTCGTCCCTTCAATGCGCCATTGTTACGGCGGCAGAGACTCAGAGTTTCCTCTCTTAGCTCACCTCGGCGTGAAATTGGTTTAATGAAGCTGAAAGGTATGAAGCTCTCACAACACTGCGGATTCCAGCGACACTGCTTCATCACCCCCTCATGCCCCCCAAACTCACATTACGCCCACAAGTTATAAAGCAGCGCATAAAAGATCACTATCTCTCACATTACATCAGTGGATATTGCTGTCCCTTTCAAAGTGCCAGCGCTCAGACGAACCGCTGAGAGACAAGCCGAGGCCGTTGGCCTCAGGGACATGCCCTGGGTGCTTCAGATTCATTTGATGAATCACGTCGCTCTGAATCAAACTCAAGCATCAAACATTCTGAGTTTGGTGGAGGAGACATTGATCAGTGTGTTTTCCATCTCAGTGTATCTTATCATTTCCACGCAGTGACCCTGTGAAATGCGTTCTCATGTTACCGTTGCGACTGGGTGTGACACTTGTGGGAATGCAACGGAAGTCCAAGGAGATTATTTTGAGTGTGTCTGTGTTTGTTTGCGTGTGTATGCTTGTGTGTGTATGTTATATTAATATGATCTCCTTGTGGCATATCCTTTACGCCTTCTTACCCCCCTTTTGGACAATTGCTTGAAAATGCATCCGTAACTGAATATTTAGGTCTGTTCTGGTTTCAGTCATGTTTCAGGATCTGCAGGGAATTGGACATGAGGGAAAAAGATTAACAAATACTGGGGACCAACTTTCTGAAAAACAAACTCATGTACCCATGAAGAAAATTAAATGTCTTCATTTGTATCTGAAATGGACTAAAACTACTGCACGGAAAGTATAATTAACTTAGGAAGTGTGAATAGGAAGTATACACTTTATAAAACATTGTGAGTGTGTGCTAAAAAAGAGGCCCCAAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_11479843_11484323.mRNA True 3020 mRNA 0.42 3 11478027 11485062

Neighbor

gene id symbol gene type direction distance location
CI01000000_11381704_11382225 NA coding upstream 95739 11379877 ~ 11382288 (+)
CI01000000_11335685_11340519 F9A coding upstream 137295 11334402 ~ 11340732 (+)
CI01000000_11272091_11279011 NA coding upstream 198903 11271893 ~ 11279599 (+)
CI01000000_11137352_11139990 NA coding upstream 338002 11136838 ~ 11140025 (+)
CI01000000_11094594_11098001 NA coding upstream 379804 11091508 ~ 11101215 (+)
CI01000000_11569924_11573883 ARR3, ARR3B coding downstream 84862 11569924 ~ 11574833 (+)
CI01000000_11577295_11582295 NKRF coding downstream 91365 11576427 ~ 11582337 (+)
CI01000000_11627091_11639685 LNX2B coding downstream 141069 11626131 ~ 11640584 (+)
CI01000000_11706374_11719063 TEX11 coding downstream 221312 11706374 ~ 11719339 (+)
CI01000000_11764996_11788451 NA coding downstream 279185 11764247 ~ 11788720 (+)
G7347 NA non-coding upstream 39986 11436367 ~ 11438041 (+)
G7341 NA non-coding upstream 49329 11427847 ~ 11428698 (+)
G7331 NA non-coding upstream 63513 11411907 ~ 11414514 (+)
G7292 NA non-coding upstream 157943 11318039 ~ 11320084 (+)
G7291 NA non-coding upstream 161925 11315813 ~ 11316102 (+)
G7230 NA non-coding downstream 118016 11603078 ~ 11604033 (+)
G7242 NA non-coding downstream 120538 11605600 ~ 11606006 (+)
G7284 NA non-coding downstream 121115 11606177 ~ 11606617 (+)
G7228 NA non-coding downstream 122566 11607628 ~ 11608020 (+)
G7248 NA non-coding downstream 248869 11733931 ~ 11891806 (+)
G7153 NA other upstream 232394 11244457 ~ 11245633 (+)
G7018 NA other upstream 497155 10978489 ~ 10980872 (+)
G6820 NA other upstream 1045009 10427223 ~ 10433018 (+)
G6811 NA other upstream 1156348 10204831 ~ 10321679 (+)
G2850 NA other upstream 6751545 4725986 ~ 4726482 (+)
G7514 NA other downstream 651460 12136522 ~ 12137008 (+)
G7522 NA other downstream 693307 12178369 ~ 12179008 (+)
G9201 NA other downstream 2742375 14215024 ~ 14234941 (+)
G10201 NA other downstream 4445204 15930266 ~ 15930562 (+)
CI01000000_17339270_17345013 CXCL14, CXL14 other downstream 5854092 17339154 ~ 17346200 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location