CI01000000_11764996_11788451


Basic Information

Item Value
gene id CI01000000_11764996_11788451
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 11764247 ~ 11788720 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_11764996_11788451.mRNA
CTATAAAAGCCTATGTTTCTCACTATTTGCTATTGCTAATTGAATTTACGCAGTTTCAAAAACAGGATTAAAAAGATGTTAGAGCCCTTTGACAAAAATAGACAAATCTGTGAAAATCTGTGTGCAATTCAGCCTGTATGTGAATTGTAATCAAAAACATAAACCGGGGGCAAAATTACAATAACAAAAGGAACTAATTCACTTTATCTTCAGCATTGTGTTTTCAGTCAAACGTCATTTTGATTTGTTTATGAAAAGGCCTCTGACAAGTGCAACGCCCCTTTGTGTAGTTGCAAAAGTGCATAACATAAGTGCAAAATGTCTGCATAATGTATCTGTACACCATGTAAGAACATCTTGGACAATGAATTACACTCATACATAGCTGCAAATTGGCACATTTGAGCACAGAGTTGCCAAAGACAAGGCCGAAGCGTATTATAAAATCAGTGCCGCCTTCTTCTCTAATCCACTAAGACATTCCAGCACAGAGAATGCGATGCAAGCAAACAGGTGAATGTACAGCCTGCCATACAGTACCATTAACTCTCCAGATGCTAATTAAGCATGAAATGTGTTGCTGTAATAACACAACAGACCTCCTACGCTATCTGGCCCTTAAACCCATCAGCAAAAGCCATCGTCGTGGTCTAGGCTAGGGGATATGGGCAGTAATCTCTATGTTTCTATCATAAAACATAAGCAAATGAGATAAAGGAGGATGATAATCTCAGATGCAGTAATCCGGAATGCCGCCGCTGTCTTTGGAGGAGTCGGTGGATGAATGTGCAGCGGTATCACTGAGCTACGAGACAGCGATATGTGACCTGAAGTGTCCATGTCCTGAAGAGAGGCTTATACCATCACTGCTCATAACTCTCTATCCCAGATTAAAAAGCAGAGGGATGATGGAGAGACCGGGTCTGAAGGTTCAGCTGAGCCAGCCAAATCGCTGTGACAGGGGCAGTCATAACTATGGAATCAGGGCTACATCCCTGAGCTTCATCACGCCCACATCGCTCCATTCACTTCGTGTGCCTGCCTTCAATTTGGCTGACCAATTTGTATTTCACGCTTTAACATATGTGATGCACACAGTTCCTGAGCACATGTACACTGACGGACATACAACTGAGAGTGTGGACGTGGACTGTATTTTTGTGTATAGGCCAATCAAGAATGTTAATATTGATATAAAACAGATATTCAAATTGTCTCCTCTTGCGGCTCCACCAACTGCCTTCTCTTATGTAACCCACTCTGCTTCCTCAGCCCGCCTGTCTTTATTGGCTGATTTCTCTCTTTTCCACATTAGCACTTTCACCTCTATTACCACCACTATCATGTGTCTCTGTGACGATTGCCAAAAATGACAAACATTTTCCCCCCTTTTTACTGCTCAACCTTCTTTCTTAGACGAAATTCATTCATATTTACCTCAGAAGCAATAGACTTCACAAATGAAAAACAACCACGAGGCCTTCAAAGATAACTAAAGCCTCTTTAATAATCTTGACAGGTAACAGCCTGGCCAGAGGAGGAGAAACCAACAAGATGATCCATGGTATCCTCCTCACATACGAGAAGCTTTAATAGTGTCATTGTCCTATATACCTCTGTTAAACAATTTCCTTCTCATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_11764996_11788451.mRNA True 1642 mRNA 0.41 5 11764247 11788720

Neighbor

gene id symbol gene type direction distance location
CI01000000_11706374_11719063 TEX11 coding upstream 44908 11706374 ~ 11719339 (+)
CI01000000_11627091_11639685 LNX2B coding upstream 123663 11626131 ~ 11640584 (+)
CI01000000_11577295_11582295 NKRF coding upstream 181910 11576427 ~ 11582337 (+)
CI01000000_11569924_11573883 ARR3, ARR3B coding upstream 189414 11569924 ~ 11574833 (+)
CI01000000_11479843_11484323 NA coding upstream 279185 11478027 ~ 11485062 (+)
CI01000000_11842893_11845222 PDZD11 coding downstream 53652 11842372 ~ 11845845 (+)
CI01000000_11893395_11894471 NA coding downstream 104617 11893337 ~ 11894603 (+)
CI01000000_11912313_11914217 NA coding downstream 121691 11910411 ~ 11914325 (+)
CI01000000_11929422_11934409 ATP1B4 coding downstream 140702 11929422 ~ 11934437 (+)
CI01000000_11937097_11939092 NA coding downstream 148031 11936751 ~ 11939124 (+)
G7245 NA non-coding upstream 8526 11752428 ~ 11755721 (+)
G7263 NA non-coding upstream 21487 11739727 ~ 11742760 (+)
G7228 NA non-coding upstream 156227 11607628 ~ 11608020 (+)
G7284 NA non-coding upstream 157630 11606177 ~ 11606617 (+)
G7242 NA non-coding upstream 158241 11605600 ~ 11606006 (+)
G7446 NA non-coding downstream 32229 11820949 ~ 11823301 (+)
G7448 NA non-coding downstream 36354 11825074 ~ 11839934 (+)
G7201 NA non-coding downstream 106021 11894741 ~ 11896769 (+)
G7463 NA non-coding downstream 108685 11897405 ~ 11897657 (+)
G7200 NA non-coding downstream 115051 11903771 ~ 11904465 (+)
G7153 NA other upstream 518614 11244457 ~ 11245633 (+)
G7018 NA other upstream 783375 10978489 ~ 10980872 (+)
G6820 NA other upstream 1331229 10427223 ~ 10433018 (+)
G6811 NA other upstream 1442568 10204831 ~ 10321679 (+)
G2850 NA other upstream 7037765 4725986 ~ 4726482 (+)
G7514 NA other downstream 347802 12136522 ~ 12137008 (+)
G7522 NA other downstream 389649 12178369 ~ 12179008 (+)
G9201 NA other downstream 2438717 14215024 ~ 14234941 (+)
G10201 NA other downstream 4141546 15930266 ~ 15930562 (+)
CI01000000_17339270_17345013 CXCL14, CXL14 other downstream 5550434 17339154 ~ 17346200 (+)

Expression


Co-expression Network