G80158


Basic Information

Item Value
gene id G80158
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 8666447 ~ 8676813 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU118602
TGACAGGGTGACATGGTGCTGCTCCTTTCCCTCATCTTTACACTCTTTCTGGAGTTTCAGCCTCAAGTTCAGAAAGACTCAAGCACAGCACTGAGACATGATGAACGAGAAACACTGTCTCATTTGAATCAGAatgAGCGGCCAAACATTAAAGTTGTCTCTGATTCTGAAAATGGTGAATTTAGAGTTCTCTGTGAAATACCAGGATCAGATAACGTCTTGGATTATGAATTTTCAAATAATCTGAAGTCACTCGAGAATAAAGTAGTGAGCTGCAGTTATTCTTCAAAAAACACACCATCCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118602 True 306 lncRNA 0.40 4 8666447 8676813

Neighbor

gene id symbol gene type direction distance location
LOC122353979 NA coding downstream 9653 8649454 ~ 8656794 (-)
LOC122353983 ldlrad2,LOC107686014,LOC107743277,LOC107751250,LOC107582454,LOC107690879 coding downstream 77459 8579237 ~ 8588988 (-)
LOC122353982 NA coding downstream 115887 8544452 ~ 8550560 (-)
LOC122353695 NA coding downstream 163081 8499207 ~ 8503366 (-)
parapinopsinb parapinopsinb,LOC107743248,LOC107659528,LOC107751249,LOC107686001,LOC107582428 coding downstream 221551 8435583 ~ 8444896 (-)
ldlrad2 ldlrad2,LOC107686014,LOC107751250,LOC107582454,LOC107743277 coding upstream 26562 8703375 ~ 8707985 (-)
LOC122353986 cyb561d1,LOC107743243,LOC107751251,LOC107577342,LOC107685989,LOC107659550 coding upstream 53017 8729830 ~ 8734728 (-)
atxn7l2a atxn7l2a,LOC107659549,LOC107685990,LOC107576132,LOC107715761,LOC107718222 coding upstream 58564 8735377 ~ 8743885 (-)
sypl2a sypl2a,LOC107577447,LOC107715783,LOC107659548,LOC107718190,LOC107582376 coding upstream 67828 8744641 ~ 8752351 (-)
zgc:172270 zgc:172270,LOC107685982,LOC107715787,LOC107659543,LOC103029205,LOC108435351,LOC107580652 coding upstream 109788 8786601 ~ 8789971 (-)
G80144 ldlrad2,LOC107751250,LOC107582454,LOC107686014,LOC107743277 non-coding downstream 75440 8589089 ~ 8591007 (-)
G80130 NA non-coding downstream 130734 8508647 ~ 8535713 (-)
LOC122353969 NA non-coding downstream 215833 8445250 ~ 8450614 (-)
G79971 NA non-coding downstream 440445 8218760 ~ 8226002 (-)
G79970 NA non-coding downstream 448025 8218114 ~ 8218422 (-)
G80202 NA non-coding upstream 157278 8834091 ~ 8834625 (-)
G80205 NA non-coding upstream 170707 8847520 ~ 8850183 (-)
G80218 NA non-coding upstream 237660 8914473 ~ 8915970 (-)
G80222 NA non-coding upstream 310812 8987625 ~ 8994007 (-)
G80249 NA non-coding upstream 462974 9139787 ~ 9141913 (-)
LOC122354573 NA other downstream 127903 8532773 ~ 8538544 (-)
LOC122354572 NA other downstream 146427 8508659 ~ 8520020 (-)
LOC122353694 NA other downstream 169162 8491771 ~ 8497285 (-)
LOC122354197 LOC107694863,LOC107582459,LOC107751197,LOC107697444,LOC107581824 other downstream 459606 8196472 ~ 8206841 (-)
G79967 NA other downstream 470062 8195818 ~ 8196385 (-)
LOC122353984 NA other upstream 19637 8696450 ~ 8700757 (-)
thsd7bb NA other upstream 1136809 9813622 ~ 9866553 (-)
cntnap5l cntnap5l,LOC107687751,LOC107581667,LOC107685949,LOC107715775,LOC107718238,LOC107572029 other upstream 1218903 9895716 ~ 9961124 (-)
G80581 dennd4a,LOC107596978,LOC107686292,LOC107672237,LOC107583773 other upstream 1568789 10245602 ~ 10254848 (-)
LOC122354283 mfn2,LOC107710790,LOC107748965,LOC107602467,LOC107698839,LOC107678429,LOC107701405,LOC107552408,LOC107661155,LOC107558363,LOC107706807 other upstream 2074384 10751197 ~ 10758842 (-)

Expression


Co-expression Network