LOC122354283 (mfn2,LOC107710790,LOC107748965,LOC107602467,LOC107698839,LOC107678429,LOC107701405,LOC107552408,LOC107661155,LOC107558363,LOC107706807)


Basic Information

Item Value
gene id LOC122354283
gene name mfn2,LOC107710790,LOC107748965,LOC107602467,LOC107698839,LOC107678429,LOC107701405,LOC107552408,LOC107661155,LOC107558363,LOC107706807
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 10751197 ~ 10758842 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU119689
NNNNNgtgtgtgtgtgtgtgtgtgtgacctcgCAGGAGTGTATCTCGCATTCAGCAGTGAAAACAAAGTTTGAGCATCACACAATCAGAGCAAAGCAGATCACAGAAACGGTCAAAGACATCATGGATCACATCAACATCGCCGCCGCGGAGAAGAGGGTGGTTTCTCTGGAAAAGAGGGAGTATCTGATCGACCGGCTGGATTTCGTTCGCAATCAACTCAACCTGCTCATCCAGGACATCAAGAAGAAGATCGAGGCCATCACAGAAGAGGTCAAAGACAAGGTAAACGTCAGGAAAGCCGCAGGCATGTAACCCCGCTCCACTAGAAGAAACACTGCGTCTCGAATCTGATCTACTGAGGAACAAAGGAGTGATCTTCGCCAGCCTCCAAAACATCCGAAACTTTATTTCCTCCGCTCTCCATCAGCGCTATATATGTGTGCGTCGTTTCGATCGACGTGTTATTGGAGAAACGGAGCAACCGCTGAAATTGAGATAGTTTGATGTCAGTATCTGCTGCACTGTAAGAAAGATCTCCTCACAAGCAGCAGAATTCACAGTATATCACTTTTGAGTCTCTGAACA
>TU119698
CTAGTGAGATGTCTCTGGTTTTCCCGCGACCCAATACCAGTGTGATCGGCAAGAAGGACAAGCGACTCATGGCCGAGGTGAACGCCTCCCCGCTTAAACACTTCGTCACCGCCAAGAAGAAGATCAACGGCATCTTCGAACAGCTGGGTGCCTATATCAAAGAGAGTTCAGCCTTTCTAGAAGAGACTTACAGCAATGAGGAACTGGATCCTGTCACTACGGAGGAGCAGGTGGCGGAGGTGCGAGGATACCTGTCCAAAGTAGCAGGGATCGGGGAGGTCCTGTCCCGCAGGCACATGAAGGTGGTCTTCTTTGGCAGGACAAGTAACGGGAAAAGCTCCGTCATTAACGCCATGCTCTGGGACAAAGTTCTGCCGTCTGGAATCGGACACACCACCAACTGCTTCCTGCGAGTGGAAGGGACTGATGGGAACGAAGCGTTCCTGCTCACCGAGGGCTCGGACGAACGGAAGAGTGTTAAAGTAAATGCTCT
>XM_043252455.1
ttgtgtttgtgtttaaagagCATTTGCAAGTGTTTGTGTTGTGCATTTCATTTGCAGAACATGTCTTTTTAACGTCTTATCCCTTTGTTTCACCTCTTTACAAGATTAAATGACTAGAATTTGTGAACTTTAAATCCCGCAGTTCCTAACAAGGAGCTTTAATGTCTTTGTTGATTCGATGCCAGTAGAAACTGAAAGCAGCAACACGTGATGGGAGATTAGTTGTCCTTAAATGCTCTCATTTAgatttcaaatgtttgtttttttttattaatgttgagcaatacagattttttggattgctgaaatgtatatttatttgacatatttactCAATTAGAAACAATTGCAATATAAATcactattaataatttgaaCTGATAGCTTATTGCTGATGGTATATGTGAAAGCATTActttcttttaatagtttattacaCGGAAGACTGGGAAGACACGAATGAAGAACGAGAACACAAAACTCTGACCAACCTAGCAACACCTTGGTAACTACTCAAAAGTTTTCTTTGGTTGACTCATCTTTTATCTTCTAGTGAGATGTCTCTGGTTTTCCCGCGACCCAATACCAGTGTGATCGGCAAGAAGGACAAGCGACTCATGGCCGAGGTGAACGCCTCCCCGCTTAAACACTTCGTCACCGCCAAGAAGAAGATCAACGGCATCTTCGAACAGCTGGGTGCCTATATCAAAGAGAGTTCAGCCTTTCTAGAAGAGACTTACAGCAATGAGGAACTGGATCCTGTCACTACGGAGGAGCAGGTGGCGGAGGTGCGAGGATACCTGTCCAAAGTAGCAGGGATCGGGGAGGTCCTGTCCCGCAGGCACATGAAGGTGGTCTTCTTTGGCAGGACAAGTAACGGGAAAAGCTCCGTCATTAACGCCATGCTCTGGGACAAAGTTCTGCCGTCTGGAATCGGACACACCACCAACTGCTTCCTGCGAGTGGAAGGGACTGATGGGAACGAAGCGTTCCTGCTCACCGAGGGCTCGGACGAACGGAAGAGTGTTAAAACGGTGAATCAGTTGGCTCACGCACTACATATGGACGAGAGTCTGGACGCCGGGTGTCTGGTCAAAGTGTTCTGGCCCAAAACGAAGTGTGCTCTGCTCAGAGACGACCTGGTTCTGGTGGACAGTCCTGGCACGGACGTCACCACGCAGCTGGACAGCTGGATCGATAAGTTCTGTCTGGACGCGGATGTGTTTGTGCTGGTGGCCAACTCCGAATCTACTCTCATGAACACGgagAAGCACTTCTTCCACAAGGTCAATGAACGCCTGTCAAAGCCCAACATCTTCATCCTGAACAACCGCTGGGACGCTTCTGCCGCTGAACCCGAGTACATGGAGGACGTGAGGAAGCAGCACACGGACAGGTGCGTGAACTTCCTGGTGGAGGAGCTGAAGGTGGTGGATCGCGCTCAAGCCCCGAACCGGATCTTCTTCGTCTCGGCGAAGGAGGTGCTGAACTCCCGGATGCAGCGGGCGCAGGGTATGCCAGAGACGGGTAAGAGGCCGGCGTCTCCTCTAACGTCTTTATAACGACTGCGTTCTCGCACAGTAACGGAGTGTATCTCGCATTCAGCAGTGAAAACAAAGTTTGAGCATCACACAATCAGAGCAAAGCAGATCACAGAAACGGTCAAAGACATCATGGATCACATCAACATCGCCGCCGCGGAGAAGAGGGTGGTTTCTCTGGAAAAGAGGGAGTATCTGATCGACCGGCTGGATTTCGTTCGCAATCAACTCAACCTGCTCATCCAGGACATCAAGAAGAAGATCGAGGCCATCACAGAAGAGGTCAAAGACAAGGTAAACGTCAGGAAAGCCGCAGGCATGTAACCCCGCTCCACTAGAAGAAACACTGCGTCTCGAATCTGATCTACTGAGGAACAAAGGAGTGATCTTCGCCAGCCTCCAAAACATCCGAAACTTTATTTCCTCCGCTCTCCATCAGCGCTATATATGTGTGCGTCGTTTCGATCGACGTGTTATTGGAGAAACGGAGCAACCGCTGAAATTGAGATAGTTTGATGTCAGTATCTGCTGCACTGTAAGAAAGATCTCCTCACAAGCAGCAGAATTCACAGTATATCACTTTTGAGTCTCTGAACAATACATGCTGTTTTCCTCCATATTCTCCACATAGTCCCAAATC

Function

symbol description
mfn2 Predicted to enable GTPase activity. Acts upstream of or within several processes, including axonal transport of mitochondrion; axonogenesis; and neuromuscular junction development. Predicted to be located in mitochondrial outer membrane. Predicted to be integral component of membrane. Predicted to be intrinsic component of mitochondrial outer membrane. Is expressed in several structures, including heart; muscle; nervous system; otic vesicle; and ventral mesenchyme. Used to study Charcot-Marie-Tooth disease type 2. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease; Charcot-Marie-Tooth disease type 2A2A; Charcot-Marie-Tooth disease type 2A2B; and Charcot-Marie-Tooth disease type 6. Orthologous to human MFN2 (mitofusin 2).

NR:

description
PREDICTED: mitofusin-2-like

GO:

id name namespace
GO:0007528 neuromuscular junction development biological_process
GO:0019896 axonal transport of mitochondrion biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0048662 negative regulation of smooth muscle cell proliferation biological_process
GO:0007409 axonogenesis biological_process
GO:0008053 mitochondrial fusion biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005741 mitochondrial outer membrane cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119689 False 587 TUCP 0.47 2 10751240 10751988
TU119698 False 493 TUCP 0.54 3 10756775 10758293
XM_043252455.1 True 2181 mRNA 0.47 9 10751197 10758842

Neighbor

gene id symbol gene type direction distance location
LOC122354393 sos1,LOC107705364,LOC107654947,LOC107602966 coding downstream 666 10734744 ~ 10750531 (-)
LOC122354279 cdkn3 coding downstream 25111 10717861 ~ 10726086 (-)
LOC122354392 thsd7bb,LOC107715818,LOC107687750,LOC107685951,LOC107551783,LOC107718236 coding downstream 200156 10515859 ~ 10551041 (-)
LOC122354188 bhlhe40,LOC107577974,LOC107715793,LOC107659534,LOC107685973,LOC107718198,LOC107573081 coding downstream 429162 10318291 ~ 10322035 (-)
LOC122354381 megf11,LOC107596974,LOC107686294,LOC107672222,LOC107583869 coding downstream 445525 10266759 ~ 10305672 (-)
il1rapl1b il1rapl1,LOC107756873,LOC107677935,LOC107698784 coding upstream 22293 10781135 ~ 10926318 (-)
filip1l filip1l,LOC107747907,LOC107698788,LOC107756872,LOC107677934,LOC107562488,LOC107574218 coding upstream 238872 10997714 ~ 11034812 (-)
zgc:158270 atl2,LOC107562495,LOC107749625,LOC108441890 coding upstream 322732 11081574 ~ 11094089 (-)
LOC122354292 hnrnpll,LOC106564787 coding upstream 339691 11098533 ~ 11125023 (-)
sos1 sos1,LOC106564790 coding upstream 389898 11148740 ~ 11182772 (-)
G80631 NA non-coding downstream 175204 10575404 ~ 10575993 (-)
LOC122354526 NA non-coding downstream 253218 10494657 ~ 10497979 (-)
G80596 itpr1,LOC107581741,LOC107659525,LOC107685975 non-coding downstream 299757 10436102 ~ 10451440 (-)
G80578 NA non-coding downstream 562504 10187557 ~ 10188693 (-)
G80572 NA non-coding downstream 659442 10085314 ~ 10091755 (-)
G80931 NA non-coding upstream 284377 11043219 ~ 11048148 (-)
LOC122354511 NA non-coding upstream 369472 11128314 ~ 11130313 (-)
G80952 NA non-coding upstream 410434 11169276 ~ 11188207 (-)
G80980 NA non-coding upstream 439770 11198612 ~ 11201668 (-)
G80981 NA non-coding upstream 443216 11202058 ~ 11203144 (-)
G80581 dennd4a,LOC107596978,LOC107686292,LOC107672237,LOC107583773 other downstream 496349 10245602 ~ 10254848 (-)
cntnap5l cntnap5l,LOC107687751,LOC107581667,LOC107685949,LOC107715775,LOC107718238,LOC107572029 other downstream 790073 9895716 ~ 9961124 (-)
thsd7bb NA other downstream 884644 9813622 ~ 9866553 (-)
LOC122353984 NA other downstream 2050440 8696450 ~ 8700757 (-)
LOC122353980 NA other downstream 2083397 8553416 ~ 8667800 (-)
LOC122353594 rfc4 other upstream 3649 10762491 ~ 10765837 (-)
LOC122354338 LOC107698785 other upstream 234458 10993300 ~ 10997453 (-)
srsf7b srsf7,LOC107665899,LOC107693014 other upstream 377328 11136170 ~ 11145070 (-)
si:ch73-100l22.3 NA other upstream 492413 11251255 ~ 11261294 (-)
mafgb mafgb,mafg,mafga,LOC107564557,LOC107702026,LOC107657334,LOC108437166,LOC106533856,LOC107739593,LOC103140971,LOC106920092,LOC107376449 other upstream 504490 11263332 ~ 11286218 (-)

Expression


Co-expression Network