G80981


Basic Information

Item Value
gene id G80981
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 11202058 ~ 11203144 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU119792
TGCATCAAAATACTGAAATAGTACCAAAAGTAAAGAAATAGTATCAAATGTATCCAAGTAGTATGAAAAGCACTGAACTTTGATCAAACCTATTAAAATGTGACGCACTGATTACTCCCAAGCAGACTCTTCTGAATTTAGTGCAGCTCATATAAACATCTTCTGATCCTGAGGTTTTCTGAAGCCTTCAGAACGAGAATCAGTCGATTCTGATTCACAGCCCTTAAACTCCCATGATGCACAGCGTGTCACACGAGCTCACAAACACCTCCTTCCTACTCTTAGTCAAGTAGGACGTTTAGGAGAAGGTTTAGGAGAGTAAATGAGACAGAATgacagttttgggtgaactagtcCTTTAACTAGTCGACCGGCATCTAAGAGGACCTCTGATGTCATCAGTCAAAGGTCACGACCCACTTCTCTCTGCTGATGGAGAGAGTAAATGAGAACAGAGTGATGCGTGAGCTTCGTCATCGTCATCATCGCCTCCACCCACCATCACTGATTCATCTTCACTGAGAAATTAATAACTCAAGCCACCTAAACGTCCCTCTGAGACAGAGAGTCAAAAGATCATCAGGAAATATGAACAGAAGAACTCAGATCTCACTACGAGCCGCTAACTGACACGTCTGGATTAACTTGAAAACACTGTTATagagcagaacacacacacacacacacacacacacgcacacacacacacacgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacgcacacacacacacacacacacacacacgcacgctcacacacacacacacacacacacacgcacgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacactcacacacacacacactcacacacacacac
>TU119793
TGCATCAAAATACTGAAATAGTACCAAAAGTAAAGAAATAGTATCAAATGTATCCAAGTAGTATGAAAAGCACTGAACTTTGATCAAACCTATTAAAATGTGACGCACTGATTACTCCCAAGCAGACTCTTCTGAATTTAGTGCAGCTCATATAAACATCTTCTGATCCTGAGGTTTTCTGAAGCCTTCAGAACGAGAATCAGTCGATTCTGATTCACAGCCCTTAAACTCCCATGATGCACAGCGTGTCACACGAGCTCACAAACACCTCCTTCCTACTCTTAGTCAAGTAGGACGTTTAGGAGAAGGTTTAGGAGAGTAAATGAGACAGAATgacagttttgggtgaactagtcCTTTAACTAGTCGACCGGCATCTAAGAGGACCTCTGATGTCATCAGTCAAAGGTCACGACCCACTTCTCTCTGCTGATGGAGAGAGTAAATGAGAACAGAGTGATGCGTGAGCTTCGTCATCGTCATCATCGCCTCCACCCACCATCACTGATTCATCTTCACTGAGAAATTAATAACTCAAGCCACCTAAACGTCCCTCTGAGACAGAGAGTCAAAAGATCATCAGGAAATATGAACAGAAGAACTCAGATCTCACTACGAGCCGCTAACTGACACGTCTGGATTAACTTGAAAACACTGTTATagagcagaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacgcacacacacacacacacacacacacacgcacgctcacacacacacacacacacacacacgcacgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacactcacacacacacacactcacacacacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119792 True 1013 lncRNA 0.46 2 11202058 11203144
TU119793 False 943 lncRNA 0.45 2 11202058 11203144

Neighbor

gene id symbol gene type direction distance location
plaat1 hrasls,LOC107569888,LOC107713876,LOC107693015,LOC108435900 coding downstream 7842 11190233 ~ 11194216 (-)
sos1 sos1,LOC106564790 coding downstream 19286 11148740 ~ 11182772 (-)
LOC122354292 hnrnpll,LOC106564787 coding downstream 77035 11098533 ~ 11125023 (-)
zgc:158270 atl2,LOC107562495,LOC107749625,LOC108441890 coding downstream 107969 11081574 ~ 11094089 (-)
filip1l filip1l,LOC107747907,LOC107698788,LOC107756872,LOC107677934,LOC107562488,LOC107574218 coding downstream 167246 10997714 ~ 11034812 (-)
srsf11 srsf11,LOC103035453,LOC107101867 coding upstream 14537 11217681 ~ 11226627 (-)
pycr1b pycr1,pycr1b,LOC107572052,LOC107564555,LOC108443889 coding upstream 88275 11291419 ~ 11301952 (-)
LOC122353684 NA coding upstream 111422 11314566 ~ 11318562 (-)
aspscr1 aspscr1,LOC107726919,LOC107572045 coding upstream 117237 11320381 ~ 11337632 (-)
tmc6b tmc6,LOC107564572 coding upstream 149939 11353083 ~ 11373836 (-)
G80980 NA non-coding downstream 390 11198612 ~ 11201668 (-)
G80952 NA non-coding downstream 13851 11169276 ~ 11188207 (-)
LOC122354511 NA non-coding downstream 71745 11128314 ~ 11130313 (-)
G80931 NA non-coding downstream 153910 11043219 ~ 11048148 (-)
G80918 NA non-coding downstream 407185 10734169 ~ 10794873 (-)
G80964 NA non-coding upstream 7809 11210953 ~ 11214468 (-)
G80987 NA non-coding upstream 27041 11230185 ~ 11249173 (-)
G80989 NA non-coding upstream 35447 11238591 ~ 11239197 (-)
G80965 NA non-coding upstream 46810 11249954 ~ 11250552 (-)
G80958 syngr2b,LOC107572044,LOC107700198,LOC107713240,LOC107702021,LOC107564563 non-coding upstream 130835 11333979 ~ 11399132 (-)
srsf7b srsf7,LOC107665899,LOC107693014 other downstream 56988 11136170 ~ 11145070 (-)
LOC122354338 LOC107698785 other downstream 204605 10993300 ~ 10997453 (-)
LOC122353594 rfc4 other downstream 436221 10762491 ~ 10765837 (-)
LOC122354283 mfn2,LOC107710790,LOC107748965,LOC107602467,LOC107698839,LOC107678429,LOC107701405,LOC107552408,LOC107661155,LOC107558363,LOC107706807 other downstream 443216 10751197 ~ 10758842 (-)
G80581 dennd4a,LOC107596978,LOC107686292,LOC107672237,LOC107583773 other downstream 947210 10245602 ~ 10254848 (-)
si:ch73-100l22.3 NA other upstream 48111 11251255 ~ 11261294 (-)
mafgb mafgb,mafg,mafga,LOC107564557,LOC107702026,LOC107657334,LOC108437166,LOC106533856,LOC107739593,LOC103140971,LOC106920092,LOC107376449 other upstream 60188 11263332 ~ 11286218 (-)
LOC122354635 NA other upstream 187448 11390592 ~ 11394876 (-)
G80956 NA other upstream 200500 11403644 ~ 11419330 (-)
strn strn,LOC107702041,LOC107701064,LOC108430145,LOC107713228,LOC108271087 other upstream 333356 11536500 ~ 11631687 (-)

Expression


Co-expression Network