G80631


Basic Information

Item Value
gene id G80631
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 10575404 ~ 10575993 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU119235
gAATGCATAGtcaaacaaaatataatgtgaATTGATGGAAGTAGAAATGTAGTGAGCTTAAAGGtctcctttttaaaatatctttaatacGTTATGAAATCAAACACCATCAAATCACGTTTAAGTTCAGtcgattgtaaaaaaaaaaaaaaatcataattactGTCAATGCAGATAATACACAAGGCACGAATTCATTATATCTGAGGAGTATAAAAGGCATTTTTCTCCAAAACGATAAGGCAGGCATGTCATAAAACTAAACTTTGAAAAAGACAAGAATGTTATGATGCAAGACAGTCAATACGGGTTCATAAACCACTCAGAAGAAATATAAGTGGTCTAATGCATTGCATACTGCGAAGAACATGGCGAAGGCTTTAATAAAGCAAGATAGTTTAGCTTAGAAGCAGATTACACAGCCTCAGCACTTTCAGTTGAGCATAAACCTAGGTTTAGAGCTTGTTGTGCTGCTCCAGGCTCATTACATCATGCATTAGCTTCTGATCCCCCGTCTGACACAAAAATATGAGGcttaaacatacattaaatatcaaatacaaCTCTCAGATCAATACATCAAAGCCAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119235 True 590 lncRNA 0.35 1 10575404 10575993

Neighbor

gene id symbol gene type direction distance location
LOC122354392 thsd7bb,LOC107715818,LOC107687750,LOC107685951,LOC107551783,LOC107718236 coding downstream 24363 10515859 ~ 10551041 (-)
LOC122354188 bhlhe40,LOC107577974,LOC107715793,LOC107659534,LOC107685973,LOC107718198,LOC107573081 coding downstream 253369 10318291 ~ 10322035 (-)
LOC122354381 megf11,LOC107596974,LOC107686294,LOC107672222,LOC107583869 coding downstream 269732 10266759 ~ 10305672 (-)
trnaq-cug_19 NA coding downstream 316138 10259195 ~ 10259266 (-)
nkpd1 LOC107686002,LOC107556520,LOC107718248 coding downstream 548168 10021961 ~ 10027236 (-)
LOC122354279 cdkn3 coding upstream 141868 10717861 ~ 10726086 (-)
LOC122354393 sos1,LOC107705364,LOC107654947,LOC107602966 coding upstream 158751 10734744 ~ 10750531 (-)
il1rapl1b il1rapl1,LOC107756873,LOC107677935,LOC107698784 coding upstream 205142 10781135 ~ 10926318 (-)
filip1l filip1l,LOC107747907,LOC107698788,LOC107756872,LOC107677934,LOC107562488,LOC107574218 coding upstream 421721 10997714 ~ 11034812 (-)
zgc:158270 atl2,LOC107562495,LOC107749625,LOC108441890 coding upstream 505581 11081574 ~ 11094089 (-)
LOC122354526 NA non-coding downstream 77425 10494657 ~ 10497979 (-)
G80596 itpr1,LOC107581741,LOC107659525,LOC107685975 non-coding downstream 123964 10436102 ~ 10451440 (-)
G80578 NA non-coding downstream 386711 10187557 ~ 10188693 (-)
G80572 NA non-coding downstream 483649 10085314 ~ 10091755 (-)
G80568 NA non-coding downstream 696205 9877857 ~ 9879199 (-)
G80918 NA non-coding upstream 158176 10734169 ~ 10794873 (-)
G80931 NA non-coding upstream 467226 11043219 ~ 11048148 (-)
LOC122354511 NA non-coding upstream 552321 11128314 ~ 11130313 (-)
G80952 NA non-coding upstream 593283 11169276 ~ 11188207 (-)
G80980 NA non-coding upstream 622619 11198612 ~ 11201668 (-)
G80581 dennd4a,LOC107596978,LOC107686292,LOC107672237,LOC107583773 other downstream 320556 10245602 ~ 10254848 (-)
cntnap5l cntnap5l,LOC107687751,LOC107581667,LOC107685949,LOC107715775,LOC107718238,LOC107572029 other downstream 614280 9895716 ~ 9961124 (-)
thsd7bb NA other downstream 708851 9813622 ~ 9866553 (-)
LOC122353984 NA other downstream 1874647 8696450 ~ 8700757 (-)
LOC122353980 NA other downstream 1907604 8553416 ~ 8667800 (-)
LOC122354283 mfn2,LOC107710790,LOC107748965,LOC107602467,LOC107698839,LOC107678429,LOC107701405,LOC107552408,LOC107661155,LOC107558363,LOC107706807 other upstream 175204 10751197 ~ 10758842 (-)
LOC122353594 rfc4 other upstream 186498 10762491 ~ 10765837 (-)
LOC122354338 LOC107698785 other upstream 417307 10993300 ~ 10997453 (-)
srsf7b srsf7,LOC107665899,LOC107693014 other upstream 560177 11136170 ~ 11145070 (-)
si:ch73-100l22.3 NA other upstream 675262 11251255 ~ 11261294 (-)

Expression


Co-expression Network