G80218


Basic Information

Item Value
gene id G80218
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 8914473 ~ 8915970 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU118680
TTTTTTGGAGTCTGACGGGTGTGTGAGCATCATGTGTGCGGTTTTCCAAATCTCTCTCGTGTTGTCAGTCATGATTCACTGAGACAACAGACCatagttaaaaacaaacaaaacgagTCGCCAGACCTCGGGAGACGCAAGACATCATGAGATGCAGGCGACTTCCAGAAATACCAGGAAAATGCTGTGTACCTGGGGACGAGGGAGTCTCCTCCTCTGAGGGTGGTGGGATCCAGCTCAAAAATGGAGGAGATGTCATTGCCATCAGGGACAGACACGAGGGTGTACATGACCTTCTCGTTGGGCGTTCGCAGACGAGCCCGCAGAGCTTCATGTTCTGAGTCCAGCTAAAGGAGAGACAGACCTCGTAACCATCGACACACAACACAGTTAATTGATTATGTGactatgtggaaaaaaaaaacaaaaaaaaactttgatttgTGACATGTTGACAACTCTGAATGAAATTTTACAAAGCATTCGATGAGCACGACAAAGAAGAATCTCTAGATCGGTGTCGCAGTACGGTGTGTGTGGGCTCTAATCAAACATGTTTAGCCGTTTTTAGTTAACAAGTTTACCGCTTCTTGGTTCATTTCAGGAAAACTCAGGGGAAATTTTCACTTATATTTTAGAAACCTGACCTAAGGGTCTGTTTGCAACAAACATGATTTGGGTGCAAAGCTTAGTACATGCACACTAGCAACAGGAGGAACTGCCGCTGTAAACATGTGACGGTGTTATACCGCCACCTACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118680 True 761 lncRNA 0.45 2 8914473 8915970

Neighbor

gene id symbol gene type direction distance location
LOC122354076 LOC107715777,LOC107685976,LOC107718226,LOC107577761 coding downstream 42391 8829618 ~ 8872082 (-)
grm2b grm2b,LOC107715788,LOC107575639,LOC107659540,LOC107685980,LOC107582373,LOC107718191,LOC108435310 coding downstream 89106 8803412 ~ 8825367 (-)
si:ch211-213o11.11 LOC107659542,LOC107715786,LOC107718194,LOC107686013,LOC107582452,LOC107576659 coding downstream 117445 8791490 ~ 8797028 (-)
zgc:172270 zgc:172270,LOC107685982,LOC107715787,LOC107659543,LOC103029205,LOC108435351,LOC107580652 coding downstream 124502 8786601 ~ 8789971 (-)
sypl2a sypl2a,LOC107577447,LOC107715783,LOC107659548,LOC107718190,LOC107582376 coding downstream 162122 8744641 ~ 8752351 (-)
camkvb LOC107659532,LOC107715795,LOC107576418,LOC107718199,LOC107685970 coding upstream 229114 9145084 ~ 9188294 (-)
mst1rb mst1rb,mst1r,LOC107551784,LOC107686010,LOC107677494 coding upstream 317770 9233740 ~ 9250160 (-)
mon1a mon1a,LOC107575025,LOC107677505,LOC107685969,LOC107551794 coding upstream 340289 9256259 ~ 9261801 (-)
inka1a LOC107677492,LOC107715799,LOC107686008,LOC107718245,LOC107578626,LOC107551787,LOC107582130 coding upstream 390688 9306658 ~ 9309585 (-)
gnai2a gnai2a,gnai2,LOC107551795,LOC107685968,LOC107677503,LOC107723915,LOC105909893,LOC106517997 coding upstream 401054 9317024 ~ 9367888 (-)
G80205 NA non-coding downstream 64290 8847520 ~ 8850183 (-)
G80202 NA non-coding downstream 79848 8834091 ~ 8834625 (-)
LOC122353992 NA non-coding downstream 231223 8669256 ~ 8683250 (-)
G80158 NA non-coding downstream 237660 8666447 ~ 8676813 (-)
LOC122353991 NA non-coding downstream 238738 8670133 ~ 8675735 (-)
G80222 NA non-coding upstream 71655 8987625 ~ 8994007 (-)
G80249 NA non-coding upstream 223817 9139787 ~ 9141913 (-)
G80253 NA non-coding upstream 226998 9142968 ~ 9143225 (-)
G80328 NA non-coding upstream 508978 9424948 ~ 9426222 (-)
G80400 NA non-coding upstream 581478 9497448 ~ 9498033 (-)
LOC122353984 NA other downstream 213716 8696450 ~ 8700757 (-)
LOC122353980 NA other downstream 246673 8553416 ~ 8667800 (-)
LOC122354573 NA other downstream 375929 8532773 ~ 8538544 (-)
LOC122354572 NA other downstream 394453 8508659 ~ 8520020 (-)
LOC122353694 NA other downstream 417188 8491771 ~ 8497285 (-)
thsd7bb NA other upstream 897652 9813622 ~ 9866553 (-)
cntnap5l cntnap5l,LOC107687751,LOC107581667,LOC107685949,LOC107715775,LOC107718238,LOC107572029 other upstream 979746 9895716 ~ 9961124 (-)
G80581 dennd4a,LOC107596978,LOC107686292,LOC107672237,LOC107583773 other upstream 1329632 10245602 ~ 10254848 (-)
LOC122354283 mfn2,LOC107710790,LOC107748965,LOC107602467,LOC107698839,LOC107678429,LOC107701405,LOC107552408,LOC107661155,LOC107558363,LOC107706807 other upstream 1835227 10751197 ~ 10758842 (-)
LOC122353594 rfc4 other upstream 1846521 10762491 ~ 10765837 (-)

Expression


Co-expression Network