G10901


Basic Information

Item Value
gene id G10901
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 10421937 ~ 10539990 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU16191
aaaggtgcTTTAATATAACATGTCAGAGTCCGGAAGAAAACTTGCGACAACCATGAATCAATTCAGCTTGAAATATACTCCAAACATCAGCACTGCACAGCCTCTCCAAACTGATTTCAATCTGTGGACCTTTTAAAGTGTCTGTATGGCTTACTGAAAGAAAATTATCGCTAAAGAAAATAAGGCATAATTTAATTGAACGTGCCAGATATTTTAAGTGACGTCACAAAAACATAGTGTGTTAAAAAGCAGCACCTGACTGTTTAGTTGTGTGAAAAACAGAAGCATCACCTGTGAGCAAAACCGATAGTGTTTAAACGCTGCCAGATCACCAGGACGCggtgtcaaaaaaaaagtgaaatttgcAACGTGTTATGCATTGTTTGACCATTAGAAACAAAAACGCTAGCAAGCCAAATCGACGGCGACGACTGAAGAGAGGCTGTACAGCGCATCAACGAGCAGAAAACAGCAAGTGTGGGCTAACATAAGCATACATCTCGAATACTGACAGAAGACCAAAAACGTGAGAATGAATCGCCCTCCATCGCCTGCCGCAGAACAGGAtgaacagagagagatagagagaggtAGACGATGAAagactgaggggaaaaaaactaaaacgtgGACAACGTGTAGACACCGAACCGTGACGTGACGGACTCTgggcagagagaaagaaagagaggttATTGCCTGTTCAGCAGCGATCGGGACGTCCCGCCGCCGCTCCTCTCGTCTTAGGCACTGCGGTGATGGAGAGTCTGCACAGCTTGCGCCGAACGCTTTCGAACCCTCACTAGGAGAAAAAGTTTAGCTCTGCGAGAGGGCAAAAGCAAAGCCTACAAGCTGCGCAGAGCTCTAGTCCCTGGGCTGGTACTGGTGGTACCCTACAGGGAGGTCTTTTGTAGTGTAGTATACAGTGATAGCAGCAGCAGGGTATGGTTTAAAACGAGTCGAAactaatccaaaaaaaaaaaatatatatatatatatatatatatatatatatataaatatata
>TU16195
aaaggtgcTTTAATATAACATGTCAGAGTCCGGAAGAAAACTTGCGACAACCATGAATCAATTCAGCTTGAAATATACTCCAAACATCAGCACTGCACAGCCTCTCCAAACTGATTTCAATCTGTGGACCTTTTAAAGTGTCTGTATGGCTTACTGAAAGAAAATTATCGCTAAAGAAAATAAGGCATAATTTAATTGAACGTGCCAGATATTTTAAGTGACGTCACAAAAACATAGTGTGTTAAAAAGCAGCACCTGACTGTTTAGTTGTGTGAAAAACAGAAGCATCACCTGTGAGCAAAACCGATAGTGTTTAAACGCTGCCAGATCACCAGGACGCggtgtcaaaaaaaaagtgaaatttgcAACGTGTTATGCATTGTTTGACCATTAGAAACAAAAACGCTAGCAAGCCAAATCGACGGCGACGACTGAAGAGAGGCTGTACAGCGCATCAACGAGCAGAAAACAGCAAGTGTGGGCTAACATAAGCATACATCTCGAATACTGACAGAAGACCAAAAACGTGAGAATGAATCGCCCTCCATCGCCTGCCGCAGAACAGGAtgaacagagagagatagagagaggtAGACGATGAAagactgaggggaaaaaaactaaaacgtgGACAACGTGTAGACACCGAACCGTGACGTGACGGACTCTgggcagagagaaagaaagagaggttATTGCCTGTTCAGCAGCGATCGGGACGTCCCGCCGCCGCTCCTCTCGTCTTAGGCACTGCGGTGATGGAGAGTCTGCACAGCTTGCGCCGAACGCTTTCGAACCCTCACTAGGAGAAAAAGTTTAGCTCTGCGAGAGGGCAAAAGCAAAGCCTACAAGCTGCGCAGAGCTCTAGTCCCTGGGCTGGTACTGGTGGTACCCTACAGGGAGGTCTTTTGTAGTGTAGTATACAGTGATAGCAGCAGCAGGGTATGGTTTAAAACGAGTCGAAactaatccaaaaaaaaaaaaaaaatatatatatatatatatata
>TU16198
aaaaaaatatatatatatatatatatatatatatatatatatataaagatgatGGACCTGTACCAATTCTCAAGAACTCGCGACTCAaacaaaagaattaaaaacGATAAAAGGGATACATTTGCAATTGTGCATCCTGGTTTACGTAAAAGGACATTTCCCCTTTAAAAACGACTAGCGGGGGAACAACTGCAGTGTCTACGCTACTTCACCAAAGGCATTCGGATCAACaaagttccaaaaaaaaaaaaagctaaaacgtTCTGTTTTTGAGATGTCCAAACATTTGTCTCCAGCACCAATATTAGCGTCGGGGGGCCTGTTTGCCGAAAACGAAACGTATTTCAGCATCGGATTGCGAGACAAATATTAGCGATTGGCACGATTCAAGGGGTTAGTTGGCAAAAAGAGGCTGTGGTATATGAGACGAGTAACCTAACAAGTGCAAATGCATTCCTTTGCTCTTAGAAAACGAACTAAACATATACAAGTCTAGATAATAGTTTCGGTCTATATAATGGCACGAGCTAAAGCAAAATCGAAAACGAAAGGAGCACGAGAAGAACAGAAGATGGAGACGTGTACCCAgctttacataattaaaaatctcTGGCCTCTTTTAACAGTGCTTTTATAAAAAGAGTCTGACCTGCCtccgttttaaagcatataattCTTGTAAAGATTAGGTTCTCTGGAAATATGTCGtgtacaaaatgttaatttcccCCGTAAAAATGACATTCAAAAAAGGCACTTTGTTGGGTCGGAGAGGAAACCCCACAGTCCTTTAAACCCTACGGATTTCTacctgcatagcaacacctcaGAGAATGGTTATGGACTTGGATATCGTttcaaaaaaagggaaagaaaaagtAGTATAGTTGATTTTTTGGTTTATCATAAGCACTTTTTCAAAAGAGAAGTATTCGAGTGTCTGTTAATGTTCAGAGTCTGTTGATGTCCTGGTGGTGTGGGTGAGGTGAGGACCGCAggctggaggagagaggagagaggagagagagcagCCTGCTACCTGCCCCTCAGGTTCTGCAGCACCCCGTACACGTCCTCCTCTTTGCTCAGTCCCTCGAAGAAAGGCAGCAGGTCCAGGAGCTCCGTGTCATTCATGTCATCAAACCACGACTGCACGGGAACCTTCACCAGACACACACGGACAGTTGTTATCTGACAGTGTCACATTCATGTTATAA
>TU16200
aaaggtgcTTTAATATAACATGTCAGAGTCCGGAAGAAAACTTGCGACAACCATGAATCAATTCAGCTTGAAATATACTCCAAACATCAGCACTGCACAGCCTCTCCAAACTGATTTCAATCTGTGGACCTTTTAAAGTGTCTGTATGGCTTACTGAAAGAAAATTATCGCTAAAGAAAATAAGGCATAATTTAATTGAACGTGCCAGATATTTTAAGTGACGTCACAAAAACATAGTGTGTTAAAAAGCAGCACCTGACTGTTTAGTTGTGTGAAAAACAGAAGCATCACCTGTGAGCAAAACCGATAGTGTTTAAACGCTGCCAGATCACCAGGACGCggtgtcaaaaaaaaagtgaaatttgcAACGTGTTATGCATTGTTTGACCATTAGAAACAAAAACGCTAGCAAGCCAAATCGACGGCGACGACTGAAGAGAGGCTGTACAGCGCATCAACGAGCAGAAAACAGCAAGTGTGGGCTAACATAAGCATACATCTCGAATACTGACAGAAGACCAAAAACGTGAGAATGAATCGCCCTCCATCGCCTGCCGCAGAACAGGAtgaacagagagagatagagagaggtAGACGATGAAagactgaggggaaaaaaactaaaacgtgGACAACGTGTAGACACCGAACCGTGACGTGACGGACTCTgggcagagagaaagaaagagaggttATTGCCTGTTCAGCAGCGATCGGGACGTCCCGCCGCCGCTCCTCTCGTCTTAGGCACTGCGGTGATGGAGAGTCTGCACAGCTTGCGCCGAACGCTTTCGAACCCTCACTAGGAGAAAAAGTTTAGCTCTGCGAGAGGGCAAAAGCAAAGCCTACAAGCTGCGCAGAGCTCTAGTCCCTGGGCTGGTACTGGTGGTACCCTACAGGGAGGTCTTTTGTAGTGTAGTATACAGTGATAGCAGCAGCAGGGTATGGTTTAAAACGAGTCGAAactaatccaaaaaaaaaaaatatatatatatatatatatatatatatatataaatatata
>TU16201
aatatatatatatatatataaagatgatGGACCTGTACCAATTCTCAAGAACTCGCGACTCAaacaaaagaattaaaaacGATAAAAGGGATACATTTGCAATTGTGCATCCTGGTTTACGTAAAAGGACATTTCCCCTTTAAAAACGACTAGCGGGGGAACAACTGCAGTGTCTACGCTACTTCACCAAAGGCATTCGGATCAACaaagttccaaaaaaaaaaaaagctaaaacgtTCTGTTTTTGAGATGTCCAAACATTTGTCTCCAGCACCAATATTAGCGTCGGGGGGCCTGTTTGCCGAAAACGAAACGTATTTCAGCATCGGATTGCGAGACAAATATTAGCGATTGGCACGATTCAAGGGGTTAGTTGGCAAAAAGAGGCTGTGGTATATGAGACGAGTAACCTAACAAGTGCAAATGCATTCCTTTGCTCTTAGAAAACGAACTAAACATATACAAGTCTAGATAATAGTTTCGGTCTATATAATGGCACGAGCTAAAGCAAAATCGAAAACGAAAGGAGCACGAGAAGAACAGAAGATGGAGACGTGTACCCAgctttacataattaaaaatctcTGGCCTCTTTTAACAGTGCTTTTATAAAAAGAGTCTGACCTGCCtccgttttaaagcatataattCTTGTAAAGATTAGGTTCTCTGGAAATATGTCGtgtacaaaatgttaatttcccCCGTAAAAATGACATTCAAAAAAGGCACTTTGTTGGGTCGGAGAGGAAACCCCACAGTCCTTTAAACCCTACGGATTTCTacctgcatagcaacacctcaGAGAATGGTTATGGACTTGGATATCGTttcaaaaaaagggaaagaaaaagtAGTATAGTTGATTTTTTGGTTTATCATAAGCACTTTTTCAAAAGAGAAGTATTCGAGTGTCTGTTAATGTTCAGAGTCTGTTGATGTCCTGGTGGTGTGGGTGAGGTGAGGACCGCAggctggaggagagaggagagaggagagagagcagCCTGCTACCTGCCCCTCAGGTTCTGCAGCACCCCGTACACGTCCTCCTCTTTGCTCAGTCCCTCGAAGAAAGGCAGCAGGTCCAGGAGCTCCGTGTCATTCATGTCATCAAACCACGACTGCACGGGAACCTTCACCAGACACACACGGACAGTTGTTATCTGACAGTGTCACATTCATGTTATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU16191 False 1026 lncRNA 0.61 2 10507334 10521710
TU16195 False 1008 lncRNA 0.43 2 10507334 10539990
TU16198 True 1217 lncRNA 0.41 2 10421937 10509519
TU16200 False 1024 lncRNA 0.57 2 10507334 10521710
TU16201 False 1192 lncRNA 0.50 2 10489590 10509519

Neighbor

gene id symbol gene type direction distance location
chd7 chd7,LOC107722533,LOC107718105,LOC107689390,LOC107589837,LOC107585562,LOC107688517 coding upstream 43715 10337523 ~ 10378222 (+)
rab2a rab2a coding upstream 85256 10325058 ~ 10336681 (+)
LOC122355329 cyp7a1,LOC107722516,LOC107693703,LOC107586715,LOC107691428,LOC107589909,LOC107718110 coding upstream 206070 10212891 ~ 10215867 (+)
fam110b fam110b,LOC107585622,LOC107722620,LOC107693712,LOC107691438,LOC107589841,LOC107718111 coding upstream 223661 10168240 ~ 10198276 (+)
gtf2b gtf2b,LOC107693714,LOC107585659,LOC107718116 coding upstream 301998 10114573 ~ 10119939 (+)
bmi1b bmi1b,LOC107585379,LOC107688441,LOC107689401 coding downstream 44883 10584873 ~ 10590460 (+)
nebl nebl,LOC107722518,LOC107688530,LOC107718172,LOC107689428 coding downstream 72000 10611990 ~ 10616296 (+)
nrn1b nrn1b,LOC107722529,LOC107688533,LOC107589820 coding downstream 118611 10658601 ~ 10660461 (+)
rpp40 rpp40,LOC107688445,LOC107722637,LOC107689405 coding downstream 125915 10665905 ~ 10671812 (+)
oxsr1a oxsr1a,LOC107718088,LOC107589819,LOC107722611,LOC107585310,LOC107689410,LOC107688448 coding downstream 152520 10692510 ~ 10702785 (+)
G10903 NA non-coding upstream 28787 10392693 ~ 10393150 (+)
G10902 NA non-coding upstream 29981 10391669 ~ 10391956 (+)
G10883 NA non-coding upstream 212086 10209563 ~ 10209851 (+)
G10838 NA non-coding upstream 279966 10141342 ~ 10141971 (+)
G10819 NA non-coding upstream 358123 10058532 ~ 10063814 (+)
LOC122359526 NA non-coding downstream 27891 10567881 ~ 10569008 (+)
G11077 NA non-coding downstream 218066 10758056 ~ 10831642 (+)
LOC122359515 NA non-coding downstream 280121 10820111 ~ 10822197 (+)
G11106 NA non-coding downstream 356693 10896683 ~ 10897497 (+)
G11117 NA non-coding downstream 413060 10953050 ~ 10978280 (+)
selenof selenof,sep15,LOC107693704,LOC106598901 other upstream 260128 10158532 ~ 10161809 (+)
znf414 LOC107722538,LOC107564712,LOC107693731,LOC107691619,LOC107718126 other upstream 505076 9911628 ~ 9916861 (+)
arpc5a arpc5a,arpc5,LOC107722639,LOC107693740,LOC107564704,LOC107677751,LOC107718183 other upstream 670725 9746570 ~ 9751212 (+)
olfm3b olfm3b,LOC107700521,LOC107710604,LOC107745696,LOC107680049 other upstream 1250022 9162611 ~ 9171915 (+)
G10212 NA other upstream 2314160 8106865 ~ 8107777 (+)
lyrm4 lyrm4,LOC107718092,LOC107688446,LOC107722638,LOC107689406,LOC107688520 other downstream 122739 10662729 ~ 10665110 (+)
G10979 LOC107722568,LOC107585289,LOC107688450,LOC107718087,LOC107689412 other downstream 171140 10711130 ~ 10718194 (+)
LOC122359491 tesk2,si:dkeyp-75h12.2,LOC107585988,LOC107679327,LOC107602527,LOC107728975,LOC107714850,LOC107674209,LOC107562290,LOC107668671,LOC107588168,LOC107691921,LOC107753974 other downstream 579864 11119854 ~ 11135991 (+)
kcnh2a kcnh2a,LOC107718079,LOC107589806,LOC107722642,LOC107676096,LOC107586123 other downstream 689770 11229760 ~ 11264234 (+)
fitm1l LOC107589905,LOC107718171,LOC107585187,LOC107688462,LOC107722554 other downstream 763688 11303678 ~ 11338469 (+)

Expression


Co-expression Network