G10918 (inhbab,LOC107718177,LOC107589832)


Basic Information

Item Value
gene id G10918
gene name inhbab,LOC107718177,LOC107589832
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 10470121 ~ 10475283 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU16224
GTTTAAACACACGCCACGTGTCTCTGAGGTCTGGGTGAGAGTCGATCACTTAGCAGCCCTAACAACCCATTAATGTCATCACATTTCCTCATGAGGCACTAAAACATCCCTCACCTGGCTCAGCGAAGGTGATGATCTCGAAGGGCTGCTCCTCAGGTTGCTCTCGGTGTTCCCCCAGCCCCCCTCCATCTTCCTCCATCTCCACCGTGCCGTCCTCACCCACCCGTCCCACGTGCAGCTTGCGGATGGCGTTGAGCAGGGCGGCGCGGGGCACGGGGTGAGTGACGTTGGGCCGGGCGTTCAGATGCAGCATGTTGAGGATGTGCCTCTTGACCGCCTCCACCATGTCGGTCTGCTCTTCCGAGTCCTTCTGCCTCTGGGCTAGAGCGCAGGACGGGCAGGGGGTCACGGGATCTTGAGAGCCGCTCTCGGCCGGCGTGGGCGAGCAGCCCCCTGACAAACAGCCGGAGAGCAGCAGCACCCCAGTCACGAGAGTGAGCGAGGACATCCTGAGTGACGGCAGACTCACACCTCGGTCCTGTTCTGCTCCGCTGCCAAGATCACAGTCGCCGCGCTGGCTTGCTTGTCAGATCGATGCGGAAAGCGGGAGCCGGTCCAAAATAATCCTTATCTGAGCGGAGCGGTCATGGTGATAAAAGTTGAAGAGGGCTGAACGAAGCGCCGCCGGTGAGCTCCTCCTCCGGGTCGCTCTGTAGAAACCTGACGGTGCACGGCTGCCCGTGCCGGAGTTgaatggttgagtggaaagtgGGCAGGGTTAGACAGTTCTCTGACTCTTTCTTTagcactctctccctctctggcTTCTCACTGTTtgtcccctctctctttctctctctgtaattATAccttcctcctcttcatccCTCCCTCTCACTTTATTACAATCTTTCTCACTACTGACTCACTGACTTTTTcatctccctccctccctctctctctc

Function

symbol description
inhbab Predicted to enable cytokine activity. Predicted to be involved in SMAD protein signal transduction and positive regulation of pathway-restricted SMAD protein phosphorylation. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in ovarian follicle. Orthologous to human INHBA (inhibin subunit beta A).

NR:

description
PREDICTED: inhibin beta A chain-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU16224 True 964 lncRNA 0.58 2 10470121 10475283

Neighbor

gene id symbol gene type direction distance location
ralab ralab,rala,LOC107585502,LOC107718103 coding upstream 23319 10425919 ~ 10446802 (+)
c2h7orf25 zgc:55781,cunh7orf25,LOC107689392,LOC107722560,LOC107718178,LOC107589835,LOC107585545 coding upstream 44675 10422736 ~ 10425446 (+)
chd7 chd7,LOC107722533,LOC107718105,LOC107689390,LOC107589837,LOC107585562,LOC107688517 coding upstream 91899 10337523 ~ 10378222 (+)
rab2a rab2a coding upstream 133440 10325058 ~ 10336681 (+)
LOC122355329 cyp7a1,LOC107722516,LOC107693703,LOC107586715,LOC107691428,LOC107589909,LOC107718110 coding upstream 254254 10212891 ~ 10215867 (+)
plcd1b LOC107688433,LOC107722543,LOC107585437 coding downstream 18818 10494101 ~ 10506040 (+)
hhatla hhatl,LOC107688529,LOC107722653,LOC107689424,LOC107718176 coding downstream 47078 10522361 ~ 10528919 (+)
klhl40a klhl40a,LOC107722643,LOC107688437,LOC107586696,LOC107718175,LOC107689425 coding downstream 55325 10530608 ~ 10534110 (+)
bmi1b bmi1b,LOC107585379,LOC107688441,LOC107689401 coding downstream 109590 10584873 ~ 10590460 (+)
nebl nebl,LOC107722518,LOC107688530,LOC107718172,LOC107689428 coding downstream 136707 10611990 ~ 10616296 (+)
G10903 NA non-coding upstream 76971 10392693 ~ 10393150 (+)
G10902 NA non-coding upstream 78165 10391669 ~ 10391956 (+)
G10883 NA non-coding upstream 260270 10209563 ~ 10209851 (+)
G10838 NA non-coding upstream 328150 10141342 ~ 10141971 (+)
G10819 NA non-coding upstream 406307 10058532 ~ 10063814 (+)
LOC122359526 NA non-coding downstream 92598 10567881 ~ 10569008 (+)
G11077 NA non-coding downstream 282773 10758056 ~ 10831642 (+)
LOC122359515 NA non-coding downstream 344828 10820111 ~ 10822197 (+)
G11106 NA non-coding downstream 421400 10896683 ~ 10897497 (+)
G11117 NA non-coding downstream 477767 10953050 ~ 10978280 (+)
selenof selenof,sep15,LOC107693704,LOC106598901 other upstream 308312 10158532 ~ 10161809 (+)
znf414 LOC107722538,LOC107564712,LOC107693731,LOC107691619,LOC107718126 other upstream 553260 9911628 ~ 9916861 (+)
arpc5a arpc5a,arpc5,LOC107722639,LOC107693740,LOC107564704,LOC107677751,LOC107718183 other upstream 718909 9746570 ~ 9751212 (+)
olfm3b olfm3b,LOC107700521,LOC107710604,LOC107745696,LOC107680049 other upstream 1298206 9162611 ~ 9171915 (+)
G10212 NA other upstream 2362344 8106865 ~ 8107777 (+)
lyrm4 lyrm4,LOC107718092,LOC107688446,LOC107722638,LOC107689406,LOC107688520 other downstream 187446 10662729 ~ 10665110 (+)
G10979 LOC107722568,LOC107585289,LOC107688450,LOC107718087,LOC107689412 other downstream 235847 10711130 ~ 10718194 (+)
LOC122359491 tesk2,si:dkeyp-75h12.2,LOC107585988,LOC107679327,LOC107602527,LOC107728975,LOC107714850,LOC107674209,LOC107562290,LOC107668671,LOC107588168,LOC107691921,LOC107753974 other downstream 644571 11119854 ~ 11135991 (+)
kcnh2a kcnh2a,LOC107718079,LOC107589806,LOC107722642,LOC107676096,LOC107586123 other downstream 754477 11229760 ~ 11264234 (+)
fitm1l LOC107589905,LOC107718171,LOC107585187,LOC107688462,LOC107722554 other downstream 828395 11303678 ~ 11338469 (+)

Expression


Co-expression Network