plcd1b (LOC107688433,LOC107722543,LOC107585437)


Basic Information

Item Value
gene id plcd1b
gene name LOC107688433,LOC107722543,LOC107585437
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 10494101 ~ 10506040 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259298.1
ACAGGTGACTGAGCACAACACGACAGGTCTTCGTCGTATATGTGCGGCTCACTTATTCAGAAGCAGTTTTGATTTGTGCTGCGGACTAGCGACAACATGCAGTGTGTGCGAAGACAACCAGCGCGGACCAAATCTCAAGAGTCCTTGTACCGCGCGCAGATGAAAACAACGGCGAGAAACAACATCAAGCGTCTCGGTTTGGAGGGAGATGGGGACCTGCAGTTCCTGATGAGCGGCGGAGATCTTCTGAAGGTCCGCTCGGGCTCGTGGAAGAAGACGCGCTACTACAAACTCCAGGAGGACTGCAAGACCATGTGGCATGAGTCCAAAAAGGCCTTGAAGTCCAAACAGACATTCTCTGTTGAGGACATCGACGAGGTACGAACGGGTCGGCAGACGGAGGGTTTGAGGAAATACACGGAGGAGTCGCTGGAGGGCCGAGCGTTCTCCATCCTGTTTAAGGGCAGGCAGAAAGGCCTGGACCTGATCGCCAGCTCTGAGGAGGAAGCCAAGAAGTGGGTCGGCGGTTTGGAGAAGGTCATCTCGAACACGAAGAACCTCACTCCTCAGAAGAAAACAGAGCACTGGATCTACAGCTGTTTGCGTAAAGCAGATAAAAACTTTGATGATAAGATCAGTCAGAAAGAGATGAAGAGCTTTCTGCAAGACATCAACATTGAGGTGTCTGAAGACTACGCTGAAATGCTCTTTCAGAAATGTGACCAATCAAAGGGTGGATTCCTGGAGGGCGAGGAGATTAAGCATTTCTATGAAATCCtgacacagagagaggagaTTGATGTCATCTATGCAGAGTATGCAAAGACGGATGGTCTCATGAGCGCCGCTGACCTGCTCAACTTCCTGCTGAACGAACAGAGAGAAGCCGTGTCTCAGAATGACGCCCTTCAGCTTATTGACAAATATGAACTTGATGAAAATGCCAAAGCCAAACAACAAATGACAAAGGATGGCTTCCTAATGTACTTGCACCAGCCGGAGGGGCTGATCTTTAACCCGGCTCATAAAAGTGTTTACCAGGACATGAACCAGCCTCTCAACCATTACTTCATCTCCTCGTCTCATAACACATACCTGCTGGAGGACCAGCTCAAAGGACCCAGCAGCACGGAGGCATACATAAAAGCACTTCTGAAAGGGTGCCGCTGTGTGGAGTTGGACTGCTGGGATGGATCAGATGACGAGCCGGTCATTTACCACGGATACACTCTCACCTCAAAAGTCCTCTTTAAGGATGTGATCAAAGCCATTCAAGAATATGCctttaagacGTCCAAGTATCCCGTGATCCTCTCTTTGGAGAACCACTGCAGTGTGGAGCAGCAGAAGGTCATGGCTCAGCACTTGATCTCCATCCTGGGTAGCGCTCTGGTCACCAAACCCCTCGGAGATCAGATGCCCACATGCCTCCCTTCTCCAGAGgaGCTCAAAGGTCGGTTCATAATCAAGGGGAAAAGACTAGACAAACTTGAGGACGTGTTTTCAGAGTCTAAAACGGCAGATGAAGACAGCGTAACAGAGGAAGAAGATGATGAGAAAGACGAAGAAGACCAGGAAAAGAAGTCTAGTTCGCTGAAGTTGGCGAAGGAGCTGTCTGATATTGTGATCTACTGCAAAAGCGTCCACTTCCAGGGATTTGAGGATTCCCGGGACAAGCAGTCCTTTTACGAGATGGCCTCTTTCAAAGAAGGAAAAGCTGTGAAGCTGGCGGAGGAATCAGTGAACGATTATATCCATCACAACATAGACAAACTCAGCCGGATTTACCCATCGGGAGTGAGGACGGACTCGTCGAACTATAACCCCGTGCCTCTGTGGAACGCAGGCTGTCAGATAGTGGCCCTTAACTTCCAGACGCCCTGCCCAGAGATGGATCTGAACCAGGGGCTTTTCCTCCAGAACGGACAGAGCGGTTACAACCTCAAGCCTTCTTACCTACGAGACCGAGACACTACATTTGACCCCATCGTTCTTCCAGAAGGACCGTGGTTAAAGAACAAGACTCTTCATGTGATGGTGATCTCAGCCCAGCAGTTACCCAAAGTGAGTGAAAGGAAGTCCTCCATTGTGGATCCTATTGTTAAAGTGCAGATCTACGGTGTGCCAGCAGATACCACTGTGGTGGAAACGCAGTACATTGAGAATAACGGCTTCAACCCCATGTGGAACGAGAACTTCCAGTTTGATGTGCGTGTGCCAGATCTAGCCCTTGTGCGCTTTCTGGTCGAGGACTACGACTTCAGTTCGAGCAATGAGTTTATTGGCCAGTACACGCTTCCCTTTAACAGCCTGAAGAACGGATATCGTCATGTGCCACTGCTCACTGTGAATGGAGACGACCTTTCCTCCGCTGGGCTTTTCGTTCACATCATGGTTGTGGATGCTGAATAACATACGATAGCACAGGCTTTATACTCCGTCTGAGATGATCATATGTTGAAGAGTCGGCAAAACACGAGGCAGCTTGAGTGATCCTAATGGGTAAATGAGACATTTGTGGGAATAGAGCAACTTTTCTGAAGTTGCGATATGACGGTTTCGCATATCaattactttttatactttttactatttgtaaaatacatttcttacaCTTTAGTACGCCAAATAGATTGCCCGAGTGTCCATCTTTAGCGTTAGTTAAACTGAACACTGTTTTTAGAGATGCAGATTTTAGCCGAGGAATCGTTTGATGGTGGAAATAGAAATCCTCTGGGTAGATTCTCTACTTGTTTTTAAGCCTgcattagattttatattttttgtcttataTGTAGTTACATAACACTTTCGATTTATAAATGAGGTACTTAAACGCCATAATACTCGTAAAATCAGTGATTTTGATAAAACCCATTGCCAGCTGTATACATTCATGTAAAggtgaaataaatgtaagttATTCAAAA
>XM_043259306.1
ATGAGATACCTTTTACTGAGACGATAGCAGCCACAGGCAGGTAATCCGTACCTGCGAAGGGAAGACCAGAGGAACAGCGCGGCTCTCGGTTGCGTCTGTTTTGCGCCAGCGAGCCTTCGCGAGGTTTTGTGTCGTTTCTGTTTTGCGCGTGAACTCGAGAGCACCGGACAGATCGCGCGCGACGAGGATATAACAGtctgctggggttttttttttaaagagaaatggaTTCCAACGGCATTGCTGAGAGTCAAGGTTTGGAGGGAGATGGGGACCTGCAGTTCCTGATGAGCGGCGGAGATCTTCTGAAGGTCCGCTCGGGCTCGTGGAAGAAGACGCGCTACTACAAACTCCAGGAGGACTGCAAGACCATGTGGCATGAGTCCAAAAAGGCCTTGAAGTCCAAACAGACATTCTCTGTTGAGGACATCGACGAGGTACGAACGGGTCGGCAGACGGAGGGTTTGAGGAAATACACGGAGGAGTCGCTGGAGGGCCGAGCGTTCTCCATCCTGTTTAAGGGCAGGCAGAAAGGCCTGGACCTGATCGCCAGCTCTGAGGAGGAAGCCAAGAAGTGGGTCGGCGGTTTGGAGAAGGTCATCTCGAACACGAAGAACCTCACTCCTCAGAAGAAAACAGAGCACTGGATCTACAGCTGTTTGCGTAAAGCAGATAAAAACTTTGATGATAAGATCAGTCAGAAAGAGATGAAGAGCTTTCTGCAAGACATCAACATTGAGGTGTCTGAAGACTACGCTGAAATGCTCTTTCAGAAATGTGACCAATCAAAGGGTGGATTCCTGGAGGGCGAGGAGATTAAGCATTTCTATGAAATCCtgacacagagagaggagaTTGATGTCATCTATGCAGAGTATGCAAAGACGGATGGTCTCATGAGCGCCGCTGACCTGCTCAACTTCCTGCTGAACGAACAGAGAGAAGCCGTGTCTCAGAATGACGCCCTTCAGCTTATTGACAAATATGAACTTGATGAAAATGCCAAAGCCAAACAACAAATGACAAAGGATGGCTTCCTAATGTACTTGCACCAGCCGGAGGGGCTGATCTTTAACCCGGCTCATAAAAGTGTTTACCAGGACATGAACCAGCCTCTCAACCATTACTTCATCTCCTCGTCTCATAACACATACCTGCTGGAGGACCAGCTCAAAGGACCCAGCAGCACGGAGGCATACATAAAAGCACTTCTGAAAGGGTGCCGCTGTGTGGAGTTGGACTGCTGGGATGGATCAGATGACGAGCCGGTCATTTACCACGGATACACTCTCACCTCAAAAGTCCTCTTTAAGGATGTGATCAAAGCCATTCAAGAATATGCctttaagacGTCCAAGTATCCCGTGATCCTCTCTTTGGAGAACCACTGCAGTGTGGAGCAGCAGAAGGTCATGGCTCAGCACTTGATCTCCATCCTGGGTAGCGCTCTGGTCACCAAACCCCTCGGAGATCAGATGCCCACATGCCTCCCTTCTCCAGAGgaGCTCAAAGGTCGGTTCATAATCAAGGGGAAAAGACTAGACAAACTTGAGGACGTGTTTTCAGAGTCTAAAACGGCAGATGAAGACAGCGTAACAGAGGAAGAAGATGATGAGAAAGACGAAGAAGACCAGGAAAAGAAGTCTAGTTCGCTGAAGTTGGCGAAGGAGCTGTCTGATATTGTGATCTACTGCAAAAGCGTCCACTTCCAGGGATTTGAGGATTCCCGGGACAAGCAGTCCTTTTACGAGATGGCCTCTTTCAAAGAAGGAAAAGCTGTGAAGCTGGCGGAGGAATCAGTGAACGATTATATCCATCACAACATAGACAAACTCAGCCGGATTTACCCATCGGGAGTGAGGACGGACTCGTCGAACTATAACCCCGTGCCTCTGTGGAACGCAGGCTGTCAGATAGTGGCCCTTAACTTCCAGACGCCCTGCCCAGAGATGGATCTGAACCAGGGGCTTTTCCTCCAGAACGGACAGAGCGGTTACAACCTCAAGCCTTCTTACCTACGAGACCGAGACACTACATTTGACCCCATCGTTCTTCCAGAAGGACCGTGGTTAAAGAACAAGACTCTTCATGTGATGGTGATCTCAGCCCAGCAGTTACCCAAAGTGAGTGAAAGGAAGTCCTCCATTGTGGATCCTATTGTTAAAGTGCAGATCTACGGTGTGCCAGCAGATACCACTGTGGTGGAAACGCAGTACATTGAGAATAACGGCTTCAACCCCATGTGGAACGAGAACTTCCAGTTTGATGTGCGTGTGCCAGATCTAGCCCTTGTGCGCTTTCTGGTCGAGGACTACGACTTCAGTTCGAGCAATGAGTTTATTGGCCAGTACACGCTTCCCTTTAACAGCCTGAAGAACGGATATCGTCATGTGCCACTGCTCACTGTGAATGGAGACGACCTTTCCTCCGCTGGGCTTTTCGTTCACATCATGGTTGTGGATGCTGAATAACATACGATAGCACAGGCTTTATACTCCGTCTGAGATGATCATATGTTGAAGAGTCGGCAAAACACGAGGCAGCTTGAGTGATCCTAATGGGTAAATGAGACATTTGTGGGAATAGAGCAACTTTTCTGAAGTTGCGATATGACGGTTTCGCATATCaattactttttatactttttactatttgtaaaatacatttcttacaCTTTAGTACGCCAAATAGATTGCCCGAGTGTCCATCTTTAGCGTTAGTTAAACTGAACACTGTTTTTAGAGATGCAGATTTTAGCCGAGGAATCGTTTGATGGTGGAAATAGAAATCCTCTGGGTAGATTCTCTACTTGTTTTTAAGCCTgcattagattttatattttttgtcttataTGTAGTTACATAACACTTTCGATTTATAAATGAGGTACTTAAACGCCATAATACTCGTAAAATCAGTGATTTTGATAAAACCCATTGCCAGCTGTATACATTCATGTAAAggtgaaataaatgtaagttATTCAAAA

Function

NR:

description
PREDICTED: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1-like isoform X2

GO:

id name namespace
GO:0006629 lipid metabolic process biological_process
GO:0035556 intracellular signal transduction biological_process
GO:0005509 calcium ion binding molecular_function
GO:0004871 obsolete signal transducer activity molecular_function
GO:0004435 phosphatidylinositol phospholipase C activity molecular_function

KEGG:

id description
K05857 PLCD; phosphatidylinositol phospholipase C, delta

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259298.1 False 2930 mRNA 0.47 15 10496425 10506040
XM_043259306.1 True 2989 mRNA 0.47 15 10494101 10506040

Neighbor

gene id symbol gene type direction distance location
ralab ralab,rala,LOC107585502,LOC107718103 coding upstream 47299 10425919 ~ 10446802 (+)
c2h7orf25 zgc:55781,cunh7orf25,LOC107689392,LOC107722560,LOC107718178,LOC107589835,LOC107585545 coding upstream 68655 10422736 ~ 10425446 (+)
chd7 chd7,LOC107722533,LOC107718105,LOC107689390,LOC107589837,LOC107585562,LOC107688517 coding upstream 115879 10337523 ~ 10378222 (+)
rab2a rab2a coding upstream 157420 10325058 ~ 10336681 (+)
LOC122355329 cyp7a1,LOC107722516,LOC107693703,LOC107586715,LOC107691428,LOC107589909,LOC107718110 coding upstream 278234 10212891 ~ 10215867 (+)
hhatla hhatl,LOC107688529,LOC107722653,LOC107689424,LOC107718176 coding downstream 16321 10522361 ~ 10528919 (+)
klhl40a klhl40a,LOC107722643,LOC107688437,LOC107586696,LOC107718175,LOC107689425 coding downstream 24568 10530608 ~ 10534110 (+)
bmi1b bmi1b,LOC107585379,LOC107688441,LOC107689401 coding downstream 78833 10584873 ~ 10590460 (+)
nebl nebl,LOC107722518,LOC107688530,LOC107718172,LOC107689428 coding downstream 105950 10611990 ~ 10616296 (+)
nrn1b nrn1b,LOC107722529,LOC107688533,LOC107589820 coding downstream 152561 10658601 ~ 10660461 (+)
G10914 afg3l2,LOC107718155,LOC107688430,LOC107589831 non-coding upstream 11149 10445181 ~ 10482952 (+)
G10918 inhbab,LOC107718177,LOC107589832 non-coding upstream 18818 10470121 ~ 10475283 (+)
G10903 NA non-coding upstream 100951 10392693 ~ 10393150 (+)
G10902 NA non-coding upstream 102145 10391669 ~ 10391956 (+)
G10883 NA non-coding upstream 284250 10209563 ~ 10209851 (+)
LOC122359526 NA non-coding downstream 61841 10567881 ~ 10569008 (+)
G11077 NA non-coding downstream 252016 10758056 ~ 10831642 (+)
LOC122359515 NA non-coding downstream 314071 10820111 ~ 10822197 (+)
G11106 NA non-coding downstream 390643 10896683 ~ 10897497 (+)
G11117 NA non-coding downstream 447010 10953050 ~ 10978280 (+)
selenof selenof,sep15,LOC107693704,LOC106598901 other upstream 332292 10158532 ~ 10161809 (+)
znf414 LOC107722538,LOC107564712,LOC107693731,LOC107691619,LOC107718126 other upstream 577240 9911628 ~ 9916861 (+)
arpc5a arpc5a,arpc5,LOC107722639,LOC107693740,LOC107564704,LOC107677751,LOC107718183 other upstream 742889 9746570 ~ 9751212 (+)
olfm3b olfm3b,LOC107700521,LOC107710604,LOC107745696,LOC107680049 other upstream 1322186 9162611 ~ 9171915 (+)
G10212 NA other upstream 2386324 8106865 ~ 8107777 (+)
lyrm4 lyrm4,LOC107718092,LOC107688446,LOC107722638,LOC107689406,LOC107688520 other downstream 156689 10662729 ~ 10665110 (+)
G10979 LOC107722568,LOC107585289,LOC107688450,LOC107718087,LOC107689412 other downstream 205090 10711130 ~ 10718194 (+)
LOC122359491 tesk2,si:dkeyp-75h12.2,LOC107585988,LOC107679327,LOC107602527,LOC107728975,LOC107714850,LOC107674209,LOC107562290,LOC107668671,LOC107588168,LOC107691921,LOC107753974 other downstream 613814 11119854 ~ 11135991 (+)
kcnh2a kcnh2a,LOC107718079,LOC107589806,LOC107722642,LOC107676096,LOC107586123 other downstream 723720 11229760 ~ 11264234 (+)
fitm1l LOC107589905,LOC107718171,LOC107585187,LOC107688462,LOC107722554 other downstream 797638 11303678 ~ 11338469 (+)

Expression


Co-expression Network