G93879


Basic Information

Item Value
gene id G93879
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 13761046 ~ 13930294 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU138919
TGTCGTACATatttaaacgtttattttgtGACAAGTAATGCGatacaaaatgcataaatacaggcagctttgttaccaaaaaaaaaaaaaacatttgcatttttacaacACTTTCCAGTGGTCCTGTCCCGTCTGATAATCTGAACTACACACAGTATTGCCACTTACACCGAACGTcaatttagttgttttagaGCAGTCACCGGAATTTAGGATCAGATCAGAATAAATCAGATCTGTGTAAAAATACTCAAATGTAACCCCATTTGTAATCGTTAAcgttatttacatattttttttttatattaaggtTAGAATAAGATTGcagttacattttgtaattaaattacgtAATTCTGttacatgtatacacatataggctacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU138919 True 387 lncRNA 0.31 2 13761046 13930294

Neighbor

gene id symbol gene type direction distance location
LOC122356402 mycla,LOC107680680,LOC107739875,LOC107553198,LOC107576479,LOC107654967 coding downstream 18022 13739649 ~ 13743024 (-)
LOC122356826 LOC107654968,LOC107705418,LOC107602947,LOC107680458,LOC107739873 coding downstream 25224 13727742 ~ 13735822 (-)
erlec1 erlec1,LOC107654972,LOC107679899 coding downstream 76942 13679287 ~ 13684104 (-)
memo1 memo1,LOC107654980,LOC107705412 coding downstream 180950 13570790 ~ 13580096 (-)
LOC122356824 LOC107705409,LOC107600568,LOC107654911,LOC107683712 coding downstream 355503 13390572 ~ 13405543 (-)
zgc:153911 LOC107739899,LOC107683281,LOC107553199,LOC107705423 coding upstream 6474 13936768 ~ 13938825 (-)
si:dkey-157l19.2 LOC107705424,LOC107654964,LOC107602919,LOC107680818,LOC107739876,LOC107553200 coding upstream 15796 13946090 ~ 13968629 (-)
lgmn lgmn,LOC107705425,LOC107602950,LOC107654963,LOC107682791,LOC107739877,LOC107553201 coding upstream 40128 13970422 ~ 13977113 (-)
pcnx1 pcnx1,pcnx,LOC107683773 coding upstream 47798 13978092 ~ 14005778 (-)
med6 med6,LOC107654960,LOC107602956,LOC107683373,LOC107553190 coding upstream 76444 14006738 ~ 14009585 (-)
G93855 NA non-coding downstream 72420 13685947 ~ 13688626 (-)
G93562 NA non-coding downstream 85935 13579527 ~ 13675111 (-)
G93591 LOC107705361,LOC107654976,LOC107602941 non-coding downstream 94786 13665809 ~ 13666260 (-)
G93588 LOC107654976,LOC107553194,LOC107602941 non-coding downstream 97135 13661750 ~ 13663911 (-)
G93583 NA non-coding downstream 105697 13654379 ~ 13655349 (-)
G93905 NA non-coding upstream 257245 14187539 ~ 14189904 (-)
G94003 NA non-coding upstream 942138 14872432 ~ 14873014 (-)
G94016 NA non-coding upstream 1050702 14980996 ~ 14995700 (-)
G94063 NA non-coding upstream 1349113 15279407 ~ 15284055 (-)
G94132 NA non-coding upstream 1674393 15604687 ~ 15605713 (-)
map3k4 map3k4,LOC107654971,LOC107705416,LOC107679660,LOC107739870 other downstream 42732 13693026 ~ 13718314 (-)
srd5a2b srd5a2b,LOC107739895,LOC107654923,LOC107683892,LOC107705374,LOC107602938 other downstream 193021 13564422 ~ 13568025 (-)
LOC122356403 jag1,jag1b,LOC107739890,LOC107602913,LOC107655002,LOC107585528,LOC107654982,LOC107602937,LOC107739866,LOC107585514,LOC107705359,LOC107683089,LOC107683730 other downstream 202212 13520413 ~ 13558834 (-)
LOC122356823 LOC107654911,LOC107705409,LOC107600568,LOC107683712 other downstream 435995 13309952 ~ 13325051 (-)
LOC122356414 NA other downstream 1163744 12557077 ~ 12597302 (-)
LOC122356235 LOC107705430,LOC107683441,LOC107553204,LOC107602960,LOC107654922 other upstream 149238 14079532 ~ 14082790 (-)
srsf5a srsf5,srsf5a,LOC107683426,LOC107602962,LOC107654954,LOC108411053 other upstream 230029 14160323 ~ 14164414 (-)
lmbrd1 lmbrd1,LOC107747273,LOC107736841,LOC107664263 other upstream 1094538 15024832 ~ 15099233 (-)
col9a1b col9a1b,LOC107736853,LOC107664283,LOC107747286,LOC107665560,LOC107747272,LOC107736861,LOC108429279,LOC107564679 other upstream 1297038 15227332 ~ 15253357 (-)
G94128 NA other upstream 1634323 15564617 ~ 15583917 (-)

Expression


Co-expression Network