G3386


Basic Information

Item Value
gene id G3386
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 5985299 ~ 5985518 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU3771
TTATATAAGAAACAAATTATTGCCCACAATAGCAGTTCAACACATTAAAACATCATGACTCATTCATATTTCCTGCATGCACAAAAGTTCAAGCCGCAGTGGCATCTTATTCTCCACTAAACAGGGTCTGGAATTGTCTGCGCTCAGAGCAGTGGTCAGAGGCCATCTCTGTGATAAATGAGGCGGTCGCTGCAGCCCATGAGCCATCAGAACACTCTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3771 True 220 lncRNA 0.38 1 5985299 5985518

Neighbor

gene id symbol gene type direction distance location
CI01000000_05829574_05832335 SHISA3 coding upstream 152450 5829574 ~ 5832849 (+)
CI01000000_05786612_05788178 TM179 coding upstream 196087 5786612 ~ 5789212 (+)
CI01000000_05772514_05781160 NA coding upstream 203839 5771668 ~ 5781460 (+)
CI01000000_05754551_05762914 EHD1B coding upstream 221903 5753135 ~ 5763396 (+)
CI01000000_05739330_05746317 NA coding upstream 238859 5739330 ~ 5746440 (+)
CI01000000_05992362_05993043 NA coding downstream 5929 5991447 ~ 5994807 (+)
CI01000000_06020887_06024866 GRHPR, GRHPRA coding downstream 35369 6020887 ~ 6024921 (+)
CI01000000_06026678_06027850 NA coding downstream 40807 6026325 ~ 6027850 (+)
CI01000000_06590891_06591948 NA coding downstream 604788 6590306 ~ 6591967 (+)
CI01000000_06594095_06603856 ADHX, ADH5 coding downstream 608577 6594095 ~ 6603996 (+)
G3382 NA non-coding upstream 4967 5975869 ~ 5980332 (+)
G3286 NA non-coding upstream 186586 5798495 ~ 5798713 (+)
G3278 NA non-coding upstream 266113 5718931 ~ 5719186 (+)
G3196 NA non-coding upstream 272196 5695181 ~ 5713103 (+)
G3274 NA non-coding upstream 318788 5664142 ~ 5666511 (+)
G3391 NA non-coding downstream 16277 6001795 ~ 6002020 (+)
G3396 NA non-coding downstream 49227 6034745 ~ 6035066 (+)
G3769 NA non-coding downstream 110929 6096447 ~ 6096670 (+)
G3815 NA non-coding downstream 231086 6216604 ~ 6242576 (+)
G4004 NA non-coding downstream 519418 6504936 ~ 6505206 (+)
G2850 NA other upstream 1258817 4725986 ~ 4726482 (+)
G2774 NA other upstream 1531067 4453778 ~ 4454232 (+)
G579 NA other upstream 4076491 1767917 ~ 1908808 (+)
G435 NA other upstream 4552445 1425121 ~ 1432854 (+)
G350 NA other upstream 5308362 671842 ~ 676937 (+)
G6811 NA other downstream 4219313 10204831 ~ 10321679 (+)
G6820 NA other downstream 4441705 10427223 ~ 10433018 (+)
G7018 NA other downstream 4992971 10978489 ~ 10980872 (+)
G7153 NA other downstream 5258939 11244457 ~ 11245633 (+)
G7514 NA other downstream 6151004 12136522 ~ 12137008 (+)

Expression


Co-expression Network