G4047


Basic Information

Item Value
gene id G4047
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 6570549 ~ 6570793 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU4485
CGCAGACTGACAATAAGATTAATTTAGGCCTGTTTTCCAGAGATCAAAAGGGATCAGTCAGCACAATGAGTTGTTTGCTGATGGGGGAAGTAGTGTGAGTACCGTGAGTGTTGATATGTCACATTGACCTAGCCGGAACAGCTCTGCATCACGCCACTCGCCTAATGAGGTTTTTGACAACGGCCAGCTGTTCCTGGAGAGGTGAAGAGGGTATCATCTCCAAAACCGTCACACTTGCCCACTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4485 True 245 lncRNA 0.52 1 6570549 6570793

Neighbor

gene id symbol gene type direction distance location
CI01000000_06026678_06027850 NA coding upstream 542699 6026325 ~ 6027850 (+)
CI01000000_06020887_06024866 GRHPR, GRHPRA coding upstream 545628 6020887 ~ 6024921 (+)
CI01000000_05992362_05993043 NA coding upstream 575742 5991447 ~ 5994807 (+)
CI01000000_05829574_05832335 SHISA3 coding upstream 737700 5829574 ~ 5832849 (+)
CI01000000_05786612_05788178 TM179 coding upstream 781337 5786612 ~ 5789212 (+)
CI01000000_06590891_06591948 NA coding downstream 19513 6590306 ~ 6591967 (+)
CI01000000_06594095_06603856 ADHX, ADH5 coding downstream 23302 6594095 ~ 6603996 (+)
CI01000000_06849632_06863920 PCDH10B, PCDH10, PCDH10A coding downstream 278839 6849632 ~ 6864585 (+)
CI01000000_07519844_07537299 NA coding downstream 949051 7519844 ~ 7538248 (+)
CI01000000_07557719_07559566 NA coding downstream 986867 7557660 ~ 7559614 (+)
G4043 NA non-coding upstream 1730 6568615 ~ 6568819 (+)
G4030 NA non-coding upstream 15502 6554797 ~ 6555047 (+)
G4021 NA non-coding upstream 39574 6530629 ~ 6530975 (+)
G4016 NA non-coding upstream 50310 6519994 ~ 6520239 (+)
G4008 NA non-coding upstream 57790 6512556 ~ 6512759 (+)
G4052 NA non-coding downstream 8727 6579520 ~ 6579865 (+)
G4055 NA non-coding downstream 12965 6583758 ~ 6584252 (+)
G4116 NA non-coding downstream 118679 6689472 ~ 6689697 (+)
G4119 NA non-coding downstream 121449 6692242 ~ 6692464 (+)
G4125 NA non-coding downstream 131605 6702398 ~ 6702626 (+)
G2850 NA other upstream 1844067 4725986 ~ 4726482 (+)
G2774 NA other upstream 2116317 4453778 ~ 4454232 (+)
G579 NA other upstream 4661741 1767917 ~ 1908808 (+)
G435 NA other upstream 5137695 1425121 ~ 1432854 (+)
G350 NA other upstream 5893612 671842 ~ 676937 (+)
G6811 NA other downstream 3634038 10204831 ~ 10321679 (+)
G6820 NA other downstream 3856430 10427223 ~ 10433018 (+)
G7018 NA other downstream 4407696 10978489 ~ 10980872 (+)
G7153 NA other downstream 4673664 11244457 ~ 11245633 (+)
G7514 NA other downstream 5565729 12136522 ~ 12137008 (+)

Expression


Co-expression Network