G4008


Basic Information

Item Value
gene id G4008
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 6512556 ~ 6512759 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU4446
GACCTAAATGAAGAATAGGCAGGCCGGGCAATGCTTAATTTCCTTTGGACTGGAACAGCCCCGGCTGAGCCTGTGCCCCTAAATGATTAATTGGTAACTATCCATCAAGCTTTTTTGTGGGCTTTAGATAACCTACAATACCGTCTTCCTTGACCACCCCTGTGATTGAACAAGTGGGCAGAAGTAGGGGAAAGCTCAACAACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4446 True 204 lncRNA 0.33 1 6512556 6512759

Neighbor

gene id symbol gene type direction distance location
CI01000000_06026678_06027850 NA coding upstream 484706 6026325 ~ 6027850 (+)
CI01000000_06020887_06024866 GRHPR, GRHPRA coding upstream 487635 6020887 ~ 6024921 (+)
CI01000000_05992362_05993043 NA coding upstream 517749 5991447 ~ 5994807 (+)
CI01000000_05829574_05832335 SHISA3 coding upstream 679707 5829574 ~ 5832849 (+)
CI01000000_05786612_05788178 TM179 coding upstream 723344 5786612 ~ 5789212 (+)
CI01000000_06590891_06591948 NA coding downstream 77547 6590306 ~ 6591967 (+)
CI01000000_06594095_06603856 ADHX, ADH5 coding downstream 81336 6594095 ~ 6603996 (+)
CI01000000_06849632_06863920 PCDH10B, PCDH10, PCDH10A coding downstream 336873 6849632 ~ 6864585 (+)
CI01000000_07519844_07537299 NA coding downstream 1007085 7519844 ~ 7538248 (+)
CI01000000_07557719_07559566 NA coding downstream 1044901 7557660 ~ 7559614 (+)
G4004 NA non-coding upstream 7350 6504936 ~ 6505206 (+)
G3815 NA non-coding upstream 269980 6216604 ~ 6242576 (+)
G3769 NA non-coding upstream 415886 6096447 ~ 6096670 (+)
G3396 NA non-coding upstream 477490 6034745 ~ 6035066 (+)
G3391 NA non-coding upstream 510536 6001795 ~ 6002020 (+)
G4016 NA non-coding downstream 7235 6519994 ~ 6520239 (+)
G4021 NA non-coding downstream 17870 6530629 ~ 6530975 (+)
G4030 NA non-coding downstream 42038 6554797 ~ 6555047 (+)
G4043 NA non-coding downstream 55856 6568615 ~ 6568819 (+)
G4047 NA non-coding downstream 57790 6570549 ~ 6570793 (+)
G2850 NA other upstream 1786074 4725986 ~ 4726482 (+)
G2774 NA other upstream 2058324 4453778 ~ 4454232 (+)
G579 NA other upstream 4603748 1767917 ~ 1908808 (+)
G435 NA other upstream 5079702 1425121 ~ 1432854 (+)
G350 NA other upstream 5835619 671842 ~ 676937 (+)
G6811 NA other downstream 3692072 10204831 ~ 10321679 (+)
G6820 NA other downstream 3914464 10427223 ~ 10433018 (+)
G7018 NA other downstream 4465730 10978489 ~ 10980872 (+)
G7153 NA other downstream 4731698 11244457 ~ 11245633 (+)
G7514 NA other downstream 5623763 12136522 ~ 12137008 (+)

Expression


Co-expression Network