G105775 (LOC107582568,LOC107748585,LOC107597576,LOC107699896,LOC107662767)


Basic Information

Item Value
gene id G105775
gene name LOC107582568,LOC107748585,LOC107597576,LOC107699896,LOC107662767
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 11699173 ~ 11702807 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU156250
AAATTGTCATAATTACCAGTTTGTAACCCAAATTATTTACAACAAACAcgcatatttacatttcttaatcagttcatatttttataccaatgcatttttaaatgcttaatatttacatacaactagccatttttaatgtaaaaaaattaagtcataTTTTATTGCTTGCAATGTGACTGCTAAGCTATTTGGAGGTTTATTTCAGTACAAATAGTGATGCTTGCAATCTCTACTAGCCAAGGCTTTTGCTCTCTCTCAAGTCTGACCTTGTGTGCTCCACTGTGCAGCTGTTCTGCGGTCTgatcttctctctctgtgttgtgGGGGCGTCCTGCTCCCGCCGTTGTCCAGTGTGTCTGTCAGGTGTTTGAGAGGGTCCTCCGTTACAGGAGGAGGCTCAGGTGGAGGAGGCAGGTCTGCAGGCACGCACAAACCAAAAGCGTGAATGATCATCTATCCGCTCCATTATAACAGAAGAACAACTGCTTTAATTACTCCaatcaataatttattaacTCTGTGGGTTCTTACTCCCAGGTTTCAACACTTCACGTCTCGCAAGGCCATCCTTTTGAGATTTCTTATTAGGCCTGGGCTTCTGAATCGAAGACGTGAATGATGTATATTCTCCTAATAGCAGTGCAGTTTAAAGTAAACAAAGATTATATACTCCATAAATAATCATcagcaatgtaataaaaacggTTATTTTTCCAGCGGTGAAGGGCCTACTTGTGCCTGTGTTGTTGGAGAACAGTTCCTCCATTTCAGCAATGTCTCTCCAAGGACCGCTGTGGTTGGGAACGCTGCCATTAAGAGACTCTGTCTTGGTTAACGGCTTTGGGTTGGAAAGAGCAAACTGTGCATTGTGTGCGCACTGTGCTTTCCTGTTGAACAGACGCATGAGAATTTTTCTTTTACGCCAAGTCAGATTCTAAAGCTCTTGTCAAAGCGAgagaaaaagatttaaatatatgaagACGTATATATAAGGTCAAATATGAAAGGATATGTTAAAGATTCTTTTAAAGTTTGCGCTCTCAAACTAAactaattgcatccaaaataaaaatgttagtttacataaaatatgtgtactatttattatgtatatataaactatataaattgaatacataaaatatttaaatttacatacatttatatattattttgttatgttatatataaatatagcatttttatgcagcatatatacataataaatatacacagtaaacacatatataatgatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatacatatatagatagatagatagatagatagatagatagatagatagatagatagatagatgaaatgTAAGCAGTAAGCTATGAGAGGCTGTGCTGTATCgtgactattcctttaatgtcgAGCCctgatgcgtgtgtgtgtgtgtgtgtgtgtgtttaccgtGGCAGCAGGTCTGGATGGTGCAGGTTCGGCAGGTACTGCTCCTCGCTGGGGGAGGGTGTGAGAGTTGCTGTGGACTGCAGGCTATAGGTCGTGGCCCTGTTGGTTTCCTCTCCTCTCAAAGGCAGAGTGGCTACGTCCTCCAGACCCTCAATCAGATAAGATCGCTCAGGCAGCGGAGGACACCACTCTTCATCCTCCTCAGGGCTGTCTTTTGTCTGCGTTTTGAACATCCTTGTTTTGTGCTGAATGCAGGGACAGCACGTCAGACCAAGTTGGTGACGAGATTTGTCCTCGAGACTTCTGCTTCATCAGTTTGGCTTTCGCCTCTTGGGTACTGAAGTTTTGCATATTCTGCTCCGCTGTGGCTGGACTGAAGGCTCCACTGGTCCAGGTCCTGCTCTATGCTGTAGAGATCAGTTTTGGAGAGGACTGGTGTGCTGGTGTATGGGTCTGGACCCTGAGAGTACAAGCTGCACACTTCATGGCCATCTGCATCAGCTGGGTTAATGGTACAATATATGGCGCCTTCATTAGAGGCCGGGCTGTACTTCCCATTCTGGCTCAGATAATTGGATAATCCTGAAG

Function

NR:

description
PREDICTED: roundabout homolog 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156250 True 2076 lncRNA 0.39 3 11699173 11702807

Neighbor

gene id symbol gene type direction distance location
LOC122358633 NA coding downstream 53097 11644066 ~ 11646076 (-)
LOC122358632 NA coding downstream 60286 11638436 ~ 11638887 (-)
LOC122358631 NA coding downstream 74478 11623906 ~ 11624695 (-)
esamb LOC107713439,LOC107699897,LOC107582569,LOC107748586,LOC107597528 coding downstream 83949 11581249 ~ 11615224 (-)
thyn1 thyn1,LOC107713442,LOC107699901,LOC107748590,LOC107597527,LOC107582572 coding downstream 123770 11573497 ~ 11575403 (-)
hspa8b LOC107662768,LOC107597532,LOC107748584,LOC107713435,LOC102234316,LOC105903789 coding upstream 11690 11714497 ~ 11718927 (-)
sytl2b LOC107662769,LOC107726105,LOC107586275,LOC107729112,LOC107699892,LOC107597530 coding upstream 24573 11727380 ~ 11742806 (-)
picalmb picalmb,LOC107726102,LOC107597534,LOC107729110,LOC107699893,LOC107662770,LOC108435293 coding upstream 41045 11743852 ~ 11761769 (-)
med13b med13b,LOC107726096,LOC107662782,LOC107729113,LOC107657551,LOC107597541,LOC107586266 coding upstream 168952 11871759 ~ 11899452 (-)
exoc3l2b exoc3l2b,LOC107586290,LOC107662783,LOC107726108,LOC107729130,LOC107597542 coding upstream 199268 11902075 ~ 11931708 (-)
G105771 LOC107699896,LOC107597576,LOC107582568,LOC107748585,LOC107662767,LOC108435297 non-coding downstream 3799 11688835 ~ 11695374 (-)
G105767 NA non-coding downstream 44850 11653763 ~ 11654323 (-)
LOC122358516 LOC107741316,LOC107657036 non-coding downstream 67295 11631289 ~ 11631878 (-)
G105701 vps26b,LOC107713444,LOC107582573,LOC107748589,LOC107699898,LOC106613018 non-coding downstream 127997 11568732 ~ 11571176 (-)
G105716 jam3a,LOC107662760,LOC107699899,LOC107713445,LOC107597526 non-coding downstream 134825 11562217 ~ 11564348 (-)
G105776 NA non-coding upstream 77 11702884 ~ 11704998 (-)
G105783 LOC107662772,LOC107729104,LOC107699895,LOC107597533 non-coding upstream 20418 11723225 ~ 11723442 (-)
G105784 NA non-coding upstream 22615 11725422 ~ 11725876 (-)
G105789 NA non-coding upstream 59394 11762201 ~ 11762420 (-)
G105804 dyrk1a,LOC106581140,LOC106613008,LOC103378388,LOC105005788 non-coding upstream 110350 11813157 ~ 11813649 (-)
igsf9ba LOC107748591,LOC107713446,LOC107699903,LOC107582621,LOC107662765,LOC107597523 other downstream 192996 11073281 ~ 11506177 (-)
LOC122358627 vps26b,v26bl,LOC107699898,LOC107748589,LOC107582573,LOC107713444,LOC107597524 other downstream 341620 11353646 ~ 11357553 (-)
LOC122358625 LOC107662756,LOC107657263,LOC107729089,LOC107717280,LOC107586244,LOC107709114 other downstream 357057 11326512 ~ 11342116 (-)
LOC122358622 atf5b,LOC107582581,LOC107701416,LOC107713463,LOC107717185,LOC107597512,LOC107659920,LOC107736467 other downstream 394363 11302230 ~ 11304810 (-)
cryaba cryaba,LOC107582578,LOC107701412,LOC107713461 other downstream 1035585 10658934 ~ 10663588 (-)
auts2b LOC107726097,LOC107586267,LOC107662780,LOC107657550 other upstream 139959 11842766 ~ 11855895 (-)
chp2 chp2,LOC107586310,LOC107729099,LOC107657559,LOC107662757,LOC107722999,LOC107597544 other upstream 327841 12030648 ~ 12033594 (-)
LOC122359155 LOC107662800,LOC107729090,LOC107586245,LOC107586286 other upstream 577484 12280291 ~ 12290052 (-)
ercc2 ercc2,LOC107743694,LOC107601732,LOC107718279,LOC107585555,LOC107690444 other upstream 1751675 13454482 ~ 13461103 (-)
LOC122359192 usf1,LOC107601709,LOC107717282,LOC107657261,LOC107586305,LOC107677518 other upstream 2041748 13744555 ~ 13751057 (-)

Expression


Co-expression Network