G105804 (dyrk1a,LOC106581140,LOC106613008,LOC103378388,LOC105005788)


Basic Information

Item Value
gene id G105804
gene name dyrk1a,LOC106581140,LOC106613008,LOC103378388,LOC105005788
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 11813157 ~ 11813649 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU156299
CTTCCTTAAAGGAGCTAAAGTGGGGTCACGAAAGCACTGGGGCATGTGCctctgcTGGCTGGCAGTGAGTGCTTGTGTCTGATCACTGTATGGCAGTACAGTGACAGACTGGTCTGTACTCTGCTGGTGACAGTCACTGTACTGCTGGTGCGAATGAGGCATGGGAGCAGCCATCTGAAGACCAGCAGcatggaaagaaagagagggtgCAAGCCGGACAGACGAGGGTTTGCATGCTGAGGTCTCTCCCCCTAGAGGAAATTTAAGCTAAATTAATGTGTGTTAGAACA

Function

symbol description
dyrk1a Enables cytoskeletal protein binding activity; identical protein binding activity; and protein kinase activity. Involved in amyloid-beta formation; positive regulation of RNA splicing; and protein phosphorylation. Acts upstream of or within peptidyl-tyrosine phosphorylation. Located in cytoplasm and nucleus. Colocalizes with actin filament; microtubule; and neurofilament. Implicated in autism spectrum disorder; autosomal dominant non-syndromic intellectual disability 7; and intellectual disability. Biomarker of Down syndrome.

NR:

description
PREDICTED: dual specificity tyrosine-phosphorylation-regulated kinase 1A-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156299 True 290 lncRNA 0.51 2 11813157 11813649

Neighbor

gene id symbol gene type direction distance location
picalmb picalmb,LOC107726102,LOC107597534,LOC107729110,LOC107699893,LOC107662770,LOC108435293 coding downstream 51388 11743852 ~ 11761769 (-)
sytl2b LOC107662769,LOC107726105,LOC107586275,LOC107729112,LOC107699892,LOC107597530 coding downstream 70351 11727380 ~ 11742806 (-)
hspa8b LOC107662768,LOC107597532,LOC107748584,LOC107713435,LOC102234316,LOC105903789 coding downstream 94230 11714497 ~ 11718927 (-)
LOC122358633 NA coding downstream 167081 11644066 ~ 11646076 (-)
LOC122358632 NA coding downstream 174270 11638436 ~ 11638887 (-)
med13b med13b,LOC107726096,LOC107662782,LOC107729113,LOC107657551,LOC107597541,LOC107586266 coding upstream 58110 11871759 ~ 11899452 (-)
exoc3l2b exoc3l2b,LOC107586290,LOC107662783,LOC107726108,LOC107729130,LOC107597542 coding upstream 88426 11902075 ~ 11931708 (-)
ppp1r14ab ppp1r14ab,LOC107597604,LOC107586311,LOC107662758,LOC107729097,LOC107657554 coding upstream 119282 11932931 ~ 11943574 (-)
rnaset2l LOC107729117,LOC107662787,LOC107586263,LOC107723000,LOC107657558,LOC107597545 coding upstream 209415 12023064 ~ 12026460 (-)
dlc LOC107729127,LOC107586259,LOC107662790,LOC107728223,LOC107657561,LOC107597549 coding upstream 247212 12060861 ~ 12065718 (-)
G105789 NA non-coding downstream 50737 11762201 ~ 11762420 (-)
G105784 NA non-coding downstream 87281 11725422 ~ 11725876 (-)
G105783 LOC107662772,LOC107729104,LOC107699895,LOC107597533 non-coding downstream 89715 11723225 ~ 11723442 (-)
G105776 NA non-coding downstream 108159 11702884 ~ 11704998 (-)
G105775 LOC107582568,LOC107748585,LOC107597576,LOC107699896,LOC107662767 non-coding downstream 110350 11699173 ~ 11702807 (-)
G106002 NA non-coding upstream 131373 11945022 ~ 11947427 (-)
G106003 NA non-coding upstream 136334 11949983 ~ 11951020 (-)
G106001 NA non-coding upstream 137632 11951281 ~ 12043022 (-)
G106010 NA non-coding upstream 197666 12011315 ~ 12012202 (-)
G106015 NA non-coding upstream 202749 12016398 ~ 12020448 (-)
igsf9ba LOC107748591,LOC107713446,LOC107699903,LOC107582621,LOC107662765,LOC107597523 other downstream 306980 11073281 ~ 11506177 (-)
LOC122358627 vps26b,v26bl,LOC107699898,LOC107748589,LOC107582573,LOC107713444,LOC107597524 other downstream 455604 11353646 ~ 11357553 (-)
LOC122358625 LOC107662756,LOC107657263,LOC107729089,LOC107717280,LOC107586244,LOC107709114 other downstream 471041 11326512 ~ 11342116 (-)
LOC122358622 atf5b,LOC107582581,LOC107701416,LOC107713463,LOC107717185,LOC107597512,LOC107659920,LOC107736467 other downstream 508347 11302230 ~ 11304810 (-)
cryaba cryaba,LOC107582578,LOC107701412,LOC107713461 other downstream 1149569 10658934 ~ 10663588 (-)
auts2b LOC107726097,LOC107586267,LOC107662780,LOC107657550 other upstream 29117 11842766 ~ 11855895 (-)
chp2 chp2,LOC107586310,LOC107729099,LOC107657559,LOC107662757,LOC107722999,LOC107597544 other upstream 216999 12030648 ~ 12033594 (-)
LOC122359155 LOC107662800,LOC107729090,LOC107586245,LOC107586286 other upstream 466642 12280291 ~ 12290052 (-)
ercc2 ercc2,LOC107743694,LOC107601732,LOC107718279,LOC107585555,LOC107690444 other upstream 1640833 13454482 ~ 13461103 (-)
LOC122359192 usf1,LOC107601709,LOC107717282,LOC107657261,LOC107586305,LOC107677518 other upstream 1930906 13744555 ~ 13751057 (-)

Expression


Co-expression Network