G106003


Basic Information

Item Value
gene id G106003
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 11949983 ~ 11951020 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU156581
GctgatttctgtatttttgatcaaacaaatgcatataaatgaatatataaacaataataaataaaatcaaaacatgctgtgtgtatttatatataaattagaaatatacacagtacactacatatattatgtaaacaaagacttattttagatgcgattaatcgtttgacagcactaatatttagaTGTTTACATTGGTTAGAtgtgtgtttggtgttttaACACCATGTCAGCTTCCTTGGGTACTTTCATGTCGCAAATGAGttaagaaacaacaacaacaacagcaattcAATGTTTTTAACAATGCCTTACCTGGAGTCCAGCGGCTACGTGTGTGGCTTTCATGTCCATCAAATCGGCCtgtagaaaaagaaatacaacaaTGTAAGCTACCAGCAAAACAAAGATACACACTTCACTGCAAAACCGGTAGGAGAGTTACTGTGGTCCTCTTACCGTCTTTCCCGGAGCAAGCAGCCATGCACTCTTCCTCAGTGCTGTAGCGGTTGAGGTTTCCCTGGCAGCCTCCAAAGATGAAGCGCTTACAAGACTGAGTGCTGGGCTCAAAGTAAAACATCTGGAAGGCTGCACGGCACGGGCCGCTGTCGGATGGCGCAGCACAGTACCTGTGCAGGTCGTCATGCAGGATTCTTCAGTTTCATAATTGTTCTGGTTTCCACCACAGCCTCCAAAGGTGAACGGTTGACAAACGCCATTGTTGTAGTAAAAGCGTTTAATGGAGGCTCTGCAGCGTCCGGTCTTTACGGGAGCCTGACACTTCGCTGAGACGATGG

Function

NR:

description
PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like

GO:

id name namespace
GO:0005768 endosome cellular_component
GO:0005770 late endosome cellular_component
GO:0044433 obsolete cytoplasmic vesicle part cellular_component
GO:0044440 obsolete endosomal part cellular_component
GO:0098588 bounding membrane of organelle cellular_component
GO:0031902 late endosome membrane cellular_component
GO:0097708 intracellular vesicle cellular_component
GO:0031410 cytoplasmic vesicle cellular_component
GO:0010008 endosome membrane cellular_component
GO:0031982 vesicle cellular_component

KEGG:

id description
ko04514 Cell adhesion molecules
ko04144 Endocytosis
ko04217 Necroptosis

RNA

RNA id representative length rna type GC content exon number start site end site
TU156581 True 797 lncRNA 0.42 2 11949983 11951020

Neighbor

gene id symbol gene type direction distance location
ppp1r14ab ppp1r14ab,LOC107597604,LOC107586311,LOC107662758,LOC107729097,LOC107657554 coding downstream 6409 11932931 ~ 11943574 (-)
exoc3l2b exoc3l2b,LOC107586290,LOC107662783,LOC107726108,LOC107729130,LOC107597542 coding downstream 18275 11902075 ~ 11931708 (-)
med13b med13b,LOC107726096,LOC107662782,LOC107729113,LOC107657551,LOC107597541,LOC107586266 coding downstream 50531 11871759 ~ 11899452 (-)
picalmb picalmb,LOC107726102,LOC107597534,LOC107729110,LOC107699893,LOC107662770,LOC108435293 coding downstream 188214 11743852 ~ 11761769 (-)
sytl2b LOC107662769,LOC107726105,LOC107586275,LOC107729112,LOC107699892,LOC107597530 coding downstream 207177 11727380 ~ 11742806 (-)
rnaset2l LOC107729117,LOC107662787,LOC107586263,LOC107723000,LOC107657558,LOC107597545 coding upstream 72044 12023064 ~ 12026460 (-)
dlc LOC107729127,LOC107586259,LOC107662790,LOC107728223,LOC107657561,LOC107597549 coding upstream 109841 12060861 ~ 12065718 (-)
timm50 timm50,LOC107586258,LOC107662791,LOC107729126,LOC107728222,LOC107657563,LOC107597550 coding upstream 119281 12070301 ~ 12093172 (-)
tpst1 tpst1,LOC107662793,LOC107657564,LOC108425813 coding upstream 193419 12144439 ~ 12179803 (-)
aldh3a1 aldh3a1,LOC107657568,LOC107597555 coding upstream 248912 12199932 ~ 12206327 (-)
G106002 NA non-coding downstream 2556 11945022 ~ 11947427 (-)
G105804 dyrk1a,LOC106581140,LOC106613008,LOC103378388,LOC105005788 non-coding downstream 136334 11813157 ~ 11813649 (-)
G105789 NA non-coding downstream 187563 11762201 ~ 11762420 (-)
G105784 NA non-coding downstream 224107 11725422 ~ 11725876 (-)
G105783 LOC107662772,LOC107729104,LOC107699895,LOC107597533 non-coding downstream 226541 11723225 ~ 11723442 (-)
G106001 NA non-coding upstream 261 11951281 ~ 12043022 (-)
G106010 NA non-coding upstream 60295 12011315 ~ 12012202 (-)
G106015 NA non-coding upstream 65378 12016398 ~ 12020448 (-)
G106028 NA non-coding upstream 145872 12096892 ~ 12097491 (-)
G106049 NA non-coding upstream 268081 12219101 ~ 12220645 (-)
auts2b LOC107726097,LOC107586267,LOC107662780,LOC107657550 other downstream 94088 11842766 ~ 11855895 (-)
igsf9ba LOC107748591,LOC107713446,LOC107699903,LOC107582621,LOC107662765,LOC107597523 other downstream 443806 11073281 ~ 11506177 (-)
chp2 chp2,LOC107586310,LOC107729099,LOC107657559,LOC107662757,LOC107722999,LOC107597544 other upstream 79628 12030648 ~ 12033594 (-)
LOC122359155 LOC107662800,LOC107729090,LOC107586245,LOC107586286 other upstream 329271 12280291 ~ 12290052 (-)
ercc2 ercc2,LOC107743694,LOC107601732,LOC107718279,LOC107585555,LOC107690444 other upstream 1503462 13454482 ~ 13461103 (-)
LOC122359192 usf1,LOC107601709,LOC107717282,LOC107657261,LOC107586305,LOC107677518 other upstream 1793535 13744555 ~ 13751057 (-)
G106570 pafah1b1,LOC107744786,LOC107690414,LOC107592620,LOC107743664,LOC107664934,LOC102225619 other upstream 1927565 13878585 ~ 13881694 (-)

Expression


Co-expression Network