tpst1 (tpst1,LOC107662793,LOC107657564,LOC108425813)


Basic Information

Item Value
gene id tpst1
gene name tpst1,LOC107662793,LOC107657564,LOC108425813
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 12144439 ~ 12179803 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258603.1
GCACGAAAGACCGTCGTTTATGATTCGCTCAGAGGATATTTCGCCTCAGTTACTTAGATATAaattcacacatttaaaatagtcGTCTAACGCGATCGCGCGACTTCACAATCGGCCAATAAAAGGCACTTGTTTGAGACAGCGCACTCATAAAAGCCTCGATGCAAGGTTGAGTCGAAACAACGCGCATCTGGCAACCCAGCGAAGGTGACGCGCGTCGATGCGATACAGTTGTGTGGAGCGCAGCGTCGAGACGTTCACAGAGTGTCGCATTTTAAAGCGGTGAATGGAACGCCTCAAGCGAACGGCACGTCTGTGCGTTCGTCCCCGACCGCAAAGAGTTCTTGTGTAACCCGCTCGTCGTCTGTCGTGACGGATCTACCGAACCAGGCCTGATGGATTCAGGTACTCGACGAGAGCTGCGTGCAGCAGATCCCAGCCTCCACTCGCTCCGTCACGGCCAGTCCTGAGTACCGGGCGTTCACCACAACCTCACCTTCCCTTTTTCTGCTTCTTCCCCGTCTCACTCCACCCCTGGCTCCTCAACCGGGCCTCCGGCTCACCCCCGAGATGATCGGCAAGCTGAAGCAGAACTTACTGGTGGCCTGCTTGGTCATCAGCTCCGTCACGGTCTTCTACCTGGGTCGGCATGCCATGGAGTGCCATCACCGGATAGAGGAGCGCAACCTGCCCCTGGTGAGCAGCCTGCGCACCACCCTGCGCACGGGCCACAACCTCAGCACCCCCTTCATCTACAATAAAGACATGCCTCTCATATTCATCGGTGGCGTCCCTCGAAGCGGCACCACTCTTATGCGGGCCATGCTGGACGCTCATCCCGAAGTGCGCTGTGGAGAAGAAACACGTGTCATCCCTCGCATTCTGGCCATGAAGCAGATGTGGAGCCGCTCCGGCCGGGAGAAAATGCGGCTAGATGAAGCCGGAGTAACAGACGAGGTCTTGGACTCAGCCATGCAAGCTTTCCTTCTGGAGATCATCGTAAAACATGGGGAACCGGCCAACTACCTGTGTAATAAAGACCCGTTTGCTCTTAAATCACTCACTTATCTGGCTAAGATCTTTCCTCACGCTAAGTTCATCCTCATGATCCGTGACGGCAGGGCCTCTGTCCACTCCATGATCTCCCGTAAAGTCACCATCGCCGGGTTTGACTTGAGCAGCTATCGGGACTGCCTGACAAAGTGGAACCGGGCCATAGAGACAATGTACACTCAGTGTTTGGAGGCAGCGGACAAGTGCCTGCCTGTGCACTACGAACAGCTCGTCCTGCACCCGGAAAAGTGGATGAGAACGCTTCTGAAATTCCTGAACATTCCTTGGAATGATGCAGTTCTGCATCACGAGGAGCTCATCGGGAAAGCAGGAGGCGTTTCGCTCTCCAAGGTAGAGAGATCTACAGACCAGGTGATCAAGCCCGTAAACGTGGAGGCCTTATCCAAGTGGGTGGGTAAGATCCCCCCAGATGTGCTGCGGGACATGCCTGTCATCGCCCCCATGCTGGCCCGGCTCGGCTACGATCCCCACGCCAACCCTCCCAACTACGGCCGGCCCGACCCCCTCGTCCTGGATAACACTAGAAGAGTCTTTAAGGGTGAATTTCAGCTACCTGATTTTCTTAAAGAACAAACACAGCTTCAGAAGTCTCCAGAAAAGCCAAACCCAAGTTAGGAGGAAAAGACCAGAGCTTTATCAATACAAGGCTGAGTAGAAGCAGATGCCGTGGGACCATGATGGACTTGCGTCACCCCCGCTACGCTGGGACCTCCATGCATGGAAacacttacacaaacacacacacaaacacacacacacacacaggcctctGTCTGGACCCGGACCACTCTTTAGAGGACAGTTTTGGCCTTTGATGTTGTACTGTAACAATTGTGGCCTAAGAATGTCATTGTTGTTctaaattttgtgttttattcttttattttatttttttttaactcttttccACACTGTACTctaagttttattaattttcctGGCTACACAAACCTGTGATTCTGTTATAAGAAAATACAGTGGTTTTAATTAGCAGCGAGGAAATATTTATGGAGGAGCGTTAGCTTTAGAAGAcgctattttaatgtttttttttacattttcatgccTTCGTAACGTGCAATTCCTTGGGTACTGAATGATGTGCAAGACTCGGATCTTGTGTAGAGATAGACATGCATTTTGTTCTCTGCATTCACAATGGAGTGACCTTATGTACATTGAGAGCTGTAATAAATGAGCTGCCGGTGTTGAACAGAAGAGGCTCATTGACATTTTCTCCATTGGCAGAGGAGCGCACATCGGtgatgtttgttgttgtttttacgattgttatttttgtacttaagtgtaaatCATAATTATGTACTCTTTTATTTCTTTCGATTAAATAAACCCCGAGCGCTGTTGGCAGCCAATGTGCTGAAA
>XM_043258604.1
CACGAAAGACCGTCGTTTATGATTCGCTCAGAGGATATTTCGCCTCAGTTACTTAGATATAaattcacacatttaaaatagtcGTCTAACGCGATCGCGCGACTTCACAATCGGCCAATAAAAGGCACTTGTTTGAGACAGCGCACTCATAAAAGCCTCGATGCAAGGTTGAGTCGAAACAACGCGCATCTGGCAACCCAGCGAAGGTGACGCGCGTCGATGCGATACAGTTGTGTGGAGCGCAGCGTCGAGACGTTCACAGAGTGTCGCATTTTAAAGCGGTGAATGGAACGCCTCAAGCGAACGGCACGTCTGTGCGTTCGTCCCCGACCGCAAAGAGTTCTTGTGTAACCCGCTCGTCGTCTGTCGTGACGGATCTACCGAACCAGGCCTGATGGATTCAGGTACTCGACGAGAGCTGCGTGCAGCAGATCCCAGCCTCCACTCGCTCCGTCACGGCCAGTCCTGAGTACCGGGCGTTCACCACAACCTCACCTTCCCTTTTTCTGCTTCTTCCCCGTCTCACTCCACCCCTGGCTCCTCAACCGGGCCTCCGGCTCACCCCCGAGATGATCGGCAAGCTGAAGCAGAACTTACTGGTGGCCTGCTTGGTCATCAGCTCCGTCACGGTCTTCTACCTGGGTCGGCATGCCATGGAGTGCCATCACCGGATAGAGGAGCGCAACCTGCCCCTGGTGAGCAGCCTGCGCACCACCCTGCGCACGGGCCACAACCTCAGCACCCCCTTCATCTACAATAAAGACATGCCTCTCATATTCATCGGTGGCGTCCCTCGAAGCGGCACCACTCTTATGCGGGCCATGCTGGACGCTCATCCCGAAGTGCGCTGTGGAGAAGAAACACGTGTCATCCCTCGCATTCTGGCCATGAAGCAGATGTGGAGCCGCTCCGGCCGGGAGAAAATGCGGCTAGATGAAGCCGGAGTAACAGACGAGGTCTTGGACTCAGCCATGCAAGCTTTCCTTCTGGAGATCATCGTAAAACATGGGGAACCGGCCAACTACCTGTGTAATAAAGACCCGTTTGCTCTTAAATCACTCACTTATCTGGCTAAGATCTTTCCTCACGCTAAGTTCATCCTCATGATCCGTGACGGCAGGGCCTCTGTCCACTCCATGATCTCCCGTAAAGTCACCATCGCCGGGTTTGACTTGAGCAGCTATCGGGACTGCCTGACAAAGTGGAACCGGGCCATAGAGACAATGTACACTCAGTGTTTGGAGGCAGCGGACAAGTGCCTGCCTGTGCACTACGAACAGCTCGTCCTGCACCCGGAAAAGTGGATGAGAACGCTTCTGAAATTCCTGAACATTCCTTGGAATGATGCAGTTCTGCATCACGAGGAGCTCATCGGGAAAGCAGGAGGCGTTTCGCTCTCCAAGGTAGAGAGATCTACAGACCAGGTGATCAAGCCCGTAAACGTGGAGGCCTTATCCAAGTGGGTGGGTAAGATCCCCCCAGATGTGCTGCGGGACATGCCTGTCATCGCCCCCATGCTGGCCCGGCTCGGCTACGATCCCCACGCCAACCCTCCCAACTACGGCCGGCCCGACCCCCTCGTCCTGGATAACACTAGAAGACTTCAGAAGTCTCCAGAAAAGCCAAACCCAAGTTAGGAGGAAAAGACCAGAGCTTTATCAATACAAGGCTGAGTAGAAGCAGATGCCGTGGGACCATGATGGACTTGCGTCACCCCCGCTACGCTGGGACCTCCATGCATGGAAacacttacacaaacacacacacaaacacacacacacacacaggcctctGTCTGGACCCGGACCACTCTTTAGAGGACAGTTTTGGCCTTTGATGTTGTACTGTAACAATTGTGGCCTAAGAATGTCATTGTTGTTctaaattttgtgttttattcttttattttatttttttttaactcttttccACACTGTACTctaagttttattaattttcctGGCTACACAAACCTGTGATTCTGTTATAAGAAAATACAGTGGTTTTAATTAGCAGCGAGGAAATATTTATGGAGGAGCGTTAGCTTTAGAAGAcgctattttaatgtttttttttacattttcatgccTTCGTAACGTGCAATTCCTTGGGTACTGAATGATGTGCAAGACTCGGATCTTGTGTAGAGATAGACATGCATTTTGTTCTCTGCATTCACAATGGAGTGACCTTATGTACATTGAGAGCTGTAATAAATGAGCTGCCGGTGTTGAACAGAAGAGGCTCATTGACATTTTCTCCATTGGCAGAGGAGCGCACATCGGtgatgtttgttgttgtttttacgattgttatttttgtacttaagtgtaaatCATAATTATGTACTCTTTTATTTCTTTCGATTAAATAAACCCCGAGCGCTGTTGGCAGCCAATGTGCTGAAA

Function

symbol description
tpst1 Predicted to enable protein-tyrosine sulfotransferase activity. Predicted to be involved in peptidyl-tyrosine sulfation. Predicted to be integral component of Golgi membrane. Predicted to be active in Golgi apparatus. Is expressed in several structures, including alar plate midbrain region; immature eye; integument; nervous system; and periderm. Orthologous to human TPST1 (tyrosylprotein sulfotransferase 1).

NR:

description
PREDICTED: protein-tyrosine sulfotransferase 1 isoform X1

GO:

id name namespace
GO:0006478 peptidyl-tyrosine sulfation biological_process
GO:0000139 Golgi membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0008476 protein-tyrosine sulfotransferase activity molecular_function

KEGG:

id description
K01021 TPST; protein-tyrosine sulfotransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258603.1 True 2460 mRNA 0.50 6 12144439 12179803
XM_043258604.1 False 2408 mRNA 0.50 5 12144439 12179802

Neighbor

gene id symbol gene type direction distance location
timm50 timm50,LOC107586258,LOC107662791,LOC107729126,LOC107728222,LOC107657563,LOC107597550 coding downstream 51267 12070301 ~ 12093172 (-)
dlc LOC107729127,LOC107586259,LOC107662790,LOC107728223,LOC107657561,LOC107597549 coding downstream 78721 12060861 ~ 12065718 (-)
rnaset2l LOC107729117,LOC107662787,LOC107586263,LOC107723000,LOC107657558,LOC107597545 coding downstream 117979 12023064 ~ 12026460 (-)
ppp1r14ab ppp1r14ab,LOC107597604,LOC107586311,LOC107662758,LOC107729097,LOC107657554 coding downstream 200865 11932931 ~ 11943574 (-)
exoc3l2b exoc3l2b,LOC107586290,LOC107662783,LOC107726108,LOC107729130,LOC107597542 coding downstream 212731 11902075 ~ 11931708 (-)
aldh3a1 aldh3a1,LOC107657568,LOC107597555 coding upstream 20129 12199932 ~ 12206327 (-)
aldh3a2a aldh3a2a,LOC107586255,LOC107662794,LOC107729125 coding upstream 26603 12206406 ~ 12210575 (-)
LOC122359167 LOC107586254,LOC107662798,LOC107657544,LOC107717252 coding upstream 65922 12245725 ~ 12247729 (-)
usp2a usp2a,LOC108425809,LOC105920897,LOC107662797,LOC107729105,LOC107717278,LOC107586252 coding upstream 68178 12247981 ~ 12270046 (-)
tbcela LOC107729106,LOC107657569,LOC107586288,LOC107717279,LOC107662752,LOC108425808 coding upstream 90756 12270559 ~ 12280161 (-)
G106028 NA non-coding downstream 46948 12096892 ~ 12097491 (-)
G106001 NA non-coding downstream 101417 11951281 ~ 12043022 (-)
G106015 NA non-coding downstream 123991 12016398 ~ 12020448 (-)
G106010 NA non-coding downstream 132237 12011315 ~ 12012202 (-)
G106003 NA non-coding downstream 193419 11949983 ~ 11951020 (-)
G106049 NA non-coding upstream 39298 12219101 ~ 12220645 (-)
G106070 NA non-coding upstream 220284 12400087 ~ 12401495 (-)
G106079 NA non-coding upstream 248535 12428338 ~ 12428589 (-)
G106081 NA non-coding upstream 252108 12431911 ~ 12447046 (-)
G106092 NA non-coding upstream 335873 12515676 ~ 12516324 (-)
chp2 chp2,LOC107586310,LOC107729099,LOC107657559,LOC107662757,LOC107722999,LOC107597544 other downstream 110845 12030648 ~ 12033594 (-)
auts2b LOC107726097,LOC107586267,LOC107662780,LOC107657550 other downstream 288544 11842766 ~ 11855895 (-)
LOC122358627 vps26b,v26bl,LOC107699898,LOC107748589,LOC107582573,LOC107713444,LOC107597524 other downstream 786886 11353646 ~ 11357553 (-)
LOC122358625 LOC107662756,LOC107657263,LOC107729089,LOC107717280,LOC107586244,LOC107709114 other downstream 802323 11326512 ~ 11342116 (-)
LOC122358622 atf5b,LOC107582581,LOC107701416,LOC107713463,LOC107717185,LOC107597512,LOC107659920,LOC107736467 other downstream 839629 11302230 ~ 11304810 (-)
LOC122359155 LOC107662800,LOC107729090,LOC107586245,LOC107586286 other upstream 100488 12280291 ~ 12290052 (-)
ercc2 ercc2,LOC107743694,LOC107601732,LOC107718279,LOC107585555,LOC107690444 other upstream 1274679 13454482 ~ 13461103 (-)
LOC122359192 usf1,LOC107601709,LOC107717282,LOC107657261,LOC107586305,LOC107677518 other upstream 1564752 13744555 ~ 13751057 (-)
G106570 pafah1b1,LOC107744786,LOC107690414,LOC107592620,LOC107743664,LOC107664934,LOC102225619 other upstream 1698782 13878585 ~ 13881694 (-)
G106571 lis1a,pafah1b1,LOC107664934,LOC107743664,LOC108431306,LOC103047044,LOC107585584 other upstream 1704117 13883920 ~ 13905494 (-)

Expression


Co-expression Network