aldh3a2a (aldh3a2a,LOC107586255,LOC107662794,LOC107729125)


Basic Information

Item Value
gene id aldh3a2a
gene name aldh3a2a,LOC107586255,LOC107662794,LOC107729125
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 12206406 ~ 12210575 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259226.1
GTCTTAGAAAACTTTGACAACATTGCagctaaaataatcaaatatagtttatttcaGTGTTCACGTATCTGCTTATAGACACTGCTGCTTTCATGTTTGTTGCTTCTGTTACCTTTAATGTATTTGGATTTGCTTAAGTTGTTATTAAATGCTTCTTTATCTAAATGATCTAAAAAACATGTACTAAAGCTTTCAGACTCGCAATCTAGACTGACGTTACAAAATGTCTCGGGAGCAGCTGGCAGTTCAGCAGGCCAGGAAGGCTTTCCTGACTGGAAGATCTAAACCCCTGGACTACAGACTTAAACAACTTCAAAACCTAAAGcgattcattaaagaaaaaacgaCAGACATCGCCAGTGCCATGAGAGAAGACCTCCATAAGACTGCAAATGCAACACAGCTGTTTGAGATCCTCGGCTTGGAGGGAGAAATCAATCTGGCTGTCAGCAAGCTGGCTGAGTGGGCAGCTCCTCGTCCTGTGAATAAAAACCTTCTCACCATTGCAGATGATGTGTACATACAGCCAGAGCCTCTTGGTGTTGTGCTTATGATCGGGGCATGGAACTATCCAATAGCAGTTACCCTGCAGCCTCTTGTGGGAGCCATTGCTGCAGGTAACGCCGCGGTTGTGAAACCTTCAGAAGTGAGCTCTCACACAGCCAAAGTTATGGAGCTCCTGCCTCTCTACCTGGACCCCGAGATGTATCAAGTGGTAACAGGAGGGGTTCCAGAGACCCAGGAGCTGCTGAAGCAGCGTTTCGACCACATCTTCTACACCGGGAGCAGCACAGTTGGGAAACTGGTGATGGAAGCAGCAGCTCATCATCTCACACCGGTGACTTTAGAACTGGGAGGAAAAAGCCCCTGTTATGTTGACAAGAACTGTGACATTAGAATTGCCTGCCGCCGCATCACTTGGGGGAAGTATATGAACTGTGGCCAGACCTGCATTGCGCCTGATTACATCCTCTGTGAATCCAGCCTCCAAGACAAAGTGATTAATGAGATCCAGAAATGTATTCAGgAGTTTTATACGAATGACCCCAAAAGCTTTGCAGACTATGGACGAATCATTAACCAGCGACATTTTAAGAGGATAATGGCACTTATAGAGGGTAGCAAAGTGGCTATAGGAGGAGACGGTGATGAATCAGAGTGTTATATCGCTCCTACTGTTTTGAGGGATGTGACCCCAGGATCTAAAGTGATGCAGGAAGAGATCTTTGGGCCAGTTCTACCCATCGTCATCGTTAACGGCTTAAACGAAGCGATTCAGTTCATCAACGAAAGAGAAAAGCCTCTGGCGCTCTACGTTTTCTCTTCCAGTAAAAAGGTTATTACACAGATGATATCAGAGACGTCCAGCGGAGCGCTTGTAGCCAATGATTGCCTGGTGCATTTTACCATAAGCGATTTGCCTTTTGGTGGGGTTGGGAATAGTGGAACGGGTTGCTACCATGGCAAATACAGTTTCGATCAGCTAAGCCACCTTCGCAGCTGTCTTATTAAGAAGCTGAACATGGAGGGCGTGAATCAGATGCGCTACCCGCCCCATACAAGGGAGAAGTTACGCTGGGCCCGGGTTTTGCTCTTGAAGCAGGTTAATCTGGCTCGCTGGCGTCAGGTCGCACAGGTCGCTATGCTTGCTGCGCTGGCGGCCTTTGTGGTGCAGAGGTTTTTGCGACGGTGAGGACAACCTGAAGTTTGTCTCTCTGACCCATCATCTTGATTTCGTGCATACTGAAGATGTCAATAGATCCAGCGCTCATAGCACTCGCAGAAGAGCCTCTTATGATCTTGTACTTATCTTTTGAATCGGATGATATAGATTCATGTCTTTATTGTTACTTGGACTTGTGTTAAGAAGTCATAATCAATGTAACTCACTTCAAATTAAAACTTGAAGTGATAATCACATAGTCTGATACAGACCATAGAactctttgtaaaaaaaatttaaataatagctTTAATGAAGAATTATAGAATGACgttaaaacacaaataagagTCTAAGCACCTGAATTAATTTGATGTAATTACAGAAGTTAATAAAGGACCCCATGTTCTACTA

Function

symbol description
aldh3a2a Predicted to enable 3-chloroallyl aldehyde dehydrogenase activity. Predicted to act upstream of or within cellular aldehyde metabolic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Human ortholog(s) of this gene implicated in Sjogren-Larsson syndrome and arteriosclerosis. Orthologous to human ALDH3A1 (aldehyde dehydrogenase 3 family member A1) and ALDH3A2 (aldehyde dehydrogenase 3 family member A2).

NR:

description
PREDICTED: fatty aldehyde dehydrogenase-like isoform X2

GO:

id name namespace
GO:0006081 cellular aldehyde metabolic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0004030 aldehyde dehydrogenase [NAD(P)+] activity molecular_function

KEGG:

id description
K00128 ALDH; aldehyde dehydrogenase (NAD+)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259226.1 True 2077 mRNA 0.44 11 12206406 12210575

Neighbor

gene id symbol gene type direction distance location
aldh3a1 aldh3a1,LOC107657568,LOC107597555 coding downstream 79 12199932 ~ 12206327 (-)
tpst1 tpst1,LOC107662793,LOC107657564,LOC108425813 coding downstream 26603 12144439 ~ 12179803 (-)
timm50 timm50,LOC107586258,LOC107662791,LOC107729126,LOC107728222,LOC107657563,LOC107597550 coding downstream 113234 12070301 ~ 12093172 (-)
dlc LOC107729127,LOC107586259,LOC107662790,LOC107728223,LOC107657561,LOC107597549 coding downstream 140688 12060861 ~ 12065718 (-)
rnaset2l LOC107729117,LOC107662787,LOC107586263,LOC107723000,LOC107657558,LOC107597545 coding downstream 179946 12023064 ~ 12026460 (-)
LOC122359167 LOC107586254,LOC107662798,LOC107657544,LOC107717252 coding upstream 35150 12245725 ~ 12247729 (-)
usp2a usp2a,LOC108425809,LOC105920897,LOC107662797,LOC107729105,LOC107717278,LOC107586252 coding upstream 37406 12247981 ~ 12270046 (-)
tbcela LOC107729106,LOC107657569,LOC107586288,LOC107717279,LOC107662752,LOC108425808 coding upstream 59984 12270559 ~ 12280161 (-)
LOC122359154 NA coding upstream 81422 12291997 ~ 12310942 (-)
LOC122359159 sb:cb37,a2ml,LOC107586247,LOC107657263,LOC107717280,LOC107601706 coding upstream 103375 12313950 ~ 12334599 (-)
G106028 NA non-coding downstream 108915 12096892 ~ 12097491 (-)
G106001 NA non-coding downstream 163384 11951281 ~ 12043022 (-)
G106015 NA non-coding downstream 185958 12016398 ~ 12020448 (-)
G106010 NA non-coding downstream 194204 12011315 ~ 12012202 (-)
G106003 NA non-coding downstream 255386 11949983 ~ 11951020 (-)
G106049 NA non-coding upstream 8526 12219101 ~ 12220645 (-)
G106070 NA non-coding upstream 189512 12400087 ~ 12401495 (-)
G106079 NA non-coding upstream 217763 12428338 ~ 12428589 (-)
G106081 NA non-coding upstream 221336 12431911 ~ 12447046 (-)
G106092 NA non-coding upstream 305101 12515676 ~ 12516324 (-)
chp2 chp2,LOC107586310,LOC107729099,LOC107657559,LOC107662757,LOC107722999,LOC107597544 other downstream 172812 12030648 ~ 12033594 (-)
auts2b LOC107726097,LOC107586267,LOC107662780,LOC107657550 other downstream 350511 11842766 ~ 11855895 (-)
LOC122358627 vps26b,v26bl,LOC107699898,LOC107748589,LOC107582573,LOC107713444,LOC107597524 other downstream 848853 11353646 ~ 11357553 (-)
LOC122358625 LOC107662756,LOC107657263,LOC107729089,LOC107717280,LOC107586244,LOC107709114 other downstream 864290 11326512 ~ 11342116 (-)
LOC122358622 atf5b,LOC107582581,LOC107701416,LOC107713463,LOC107717185,LOC107597512,LOC107659920,LOC107736467 other downstream 901596 11302230 ~ 11304810 (-)
LOC122359155 LOC107662800,LOC107729090,LOC107586245,LOC107586286 other upstream 69716 12280291 ~ 12290052 (-)
ercc2 ercc2,LOC107743694,LOC107601732,LOC107718279,LOC107585555,LOC107690444 other upstream 1243907 13454482 ~ 13461103 (-)
LOC122359192 usf1,LOC107601709,LOC107717282,LOC107657261,LOC107586305,LOC107677518 other upstream 1533980 13744555 ~ 13751057 (-)
G106570 pafah1b1,LOC107744786,LOC107690414,LOC107592620,LOC107743664,LOC107664934,LOC102225619 other upstream 1668010 13878585 ~ 13881694 (-)
G106571 lis1a,pafah1b1,LOC107664934,LOC107743664,LOC108431306,LOC103047044,LOC107585584 other upstream 1673345 13883920 ~ 13905494 (-)

Expression


Co-expression Network