G111161 (LOC107746965,LOC107684222,LOC107551211)


Basic Information

Item Value
gene id G111161
gene name LOC107746965,LOC107684222,LOC107551211
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 10073675 ~ 10074051 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU164146
GTACCATGACAGGTTTCTTCATGATGGGCCTGTACGGTAGCATCTTCTTCATGGTCCTTATGACAGTGGATCGCTATGTTGTCATCGTCCATGCCCATAGCATCTTTTCCAGAAATCGGTCTAGAAAAATGGGTTTAATTCTGGCCTCGCTTGTATGGATTCTCAGTCTGTTTGCATCCCTccctaatattatttttactagagagaaaaaggaaaataataacagcaaGACATCATGCGGATCTGATTTTCCTGAAGAATCAGATTGGATGTCTTTTACGTACCTCAAGATGAATTTCCTGAGCTTGATCCTCCCTCTGATTATTATGGGCTTTTGCTATACCCGGGTCATCCCTATTCTGCTCAGCATAAAATCG

Function

NR:

description
PREDICTED: C-C chemokine receptor type 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU164146 True 377 TUCP 0.42 1 10073675 10074051

Neighbor

gene id symbol gene type direction distance location
pomgnt2 LOC107732433,LOC107551215,LOC107657577,LOC107751881,LOC107601673,LOC107704096 coding upstream 200690 9860197 ~ 9872985 (+)
ano10a ano10,ano10a,LOC107657579,LOC107723075,LOC107751882,LOC107601655,LOC107704098 coding upstream 256741 9787477 ~ 9816934 (+)
cnot10 LOC107657584,LOC107751886,LOC107723079,LOC107704102 coding upstream 399379 9663556 ~ 9674296 (+)
trak1a trak1,LOC107657585,LOC107723078,LOC107751889,LOC107704104 coding upstream 503857 9534588 ~ 9569818 (+)
LOC122360804 NA coding upstream 761773 9310726 ~ 9311902 (+)
si:cabz01093077.1 NA coding downstream 4521 10078572 ~ 10079575 (+)
dnah5 dnah5,LOC107751901,LOC107664631,LOC107746973,LOC107684226,LOC106579813 coding downstream 121626 10195677 ~ 10284951 (+)
LOC122361033 NA coding downstream 254235 10328286 ~ 10331967 (+)
ca14 LOC107757442,LOC107566279,LOC107691873 coding downstream 350349 10424400 ~ 10458419 (+)
LOC122361027 LOC107566274,LOC107757437,LOC107697650 coding downstream 391222 10465273 ~ 10467230 (+)
G111152 LOC107746964,LOC107551210,LOC107684220 non-coding upstream 27311 10030615 ~ 10046364 (+)
G111119 NA non-coding upstream 121311 9947351 ~ 9952364 (+)
LOC122360640 NA non-coding upstream 177590 9893516 ~ 9896085 (+)
G111031 NA non-coding upstream 356129 9690244 ~ 9717546 (+)
G111029 NA non-coding upstream 384203 9689001 ~ 9689472 (+)
G111163 NA non-coding downstream 23742 10097793 ~ 10098242 (+)
G111230 prpf3,LOC107566278,LOC107555801,LOC107572828,LOC107677690 non-coding downstream 321857 10395908 ~ 10397103 (+)
G111232 NA non-coding downstream 326218 10400269 ~ 10403040 (+)
G111250 NA non-coding downstream 418318 10492369 ~ 10492857 (+)
G111261 NA non-coding downstream 478221 10552272 ~ 10552828 (+)
G111122 NA other upstream 109289 9963105 ~ 9964386 (+)
ctnnb1 ctnnb1,LOC107570993,LOC107701997,LOC107751892,LOC107748497 other upstream 686284 9356432 ~ 9387391 (+)
LOC122360022 cpq,pgcp other upstream 841792 9192080 ~ 9231883 (+)
vamp1b zgc:92912,LOC107596691,LOC107656704,LOC107741978,LOC103044039,LOC105912972,LOC108268517,LOC108429010 other upstream 1133063 8934051 ~ 8940612 (+)
tmem238a tmem238,LOC107685601 other upstream 1242972 8820556 ~ 8830703 (+)
enpp2 enpp2,LOC107757440,LOC107697648,LOC107574906,LOC107745056,LOC107681346 other downstream 418983 10493034 ~ 10509575 (+)
LOC122361026 LOC107708300 other downstream 596906 10670957 ~ 10728460 (+)
LOC122360811 cobl,LOC107746964,LOC107684220,LOC107551210 other downstream 752552 10826603 ~ 10851438 (+)
G111415 LOC107757440,LOC107697648,LOC107574906,LOC107745056 other downstream 1130906 11204957 ~ 11211267 (+)
LOC122359964 pde11al,LOC107743218,LOC107684552,LOC103364058,LOC107685581,LOC107596730,LOC107550795,LOC107744711,LOC108441531 other downstream 1451245 11525296 ~ 11542239 (+)

Expression


Co-expression Network