LOC122361027 (LOC107566274,LOC107757437,LOC107697650)


Basic Information

Item Value
gene id LOC122361027
gene name LOC107566274,LOC107757437,LOC107697650
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 10465273 ~ 10467230 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261958.1
TAAACCGCTCTCTTAAAAGTTAAtagattttataaaattttaaattagagagatattcttttaaaaattatacaaaaaatttACATATTTCACTTAAAGTCAATTACAAAATCAGAACTGTAGTTGTAAGACCTAATTAATATACTTTGTGaaactttgtaaaaatgttgcaaGATCCTCTTTAATTTATACAGAGGAAGTGTTGTATAGTAGTATCACTGCAGATTTTTCCACTAAGTACTACATTTCTTTGCCTTTGCTTTTGGATAGAAGTCATTTATTATGAGCAGGAGCCCTGCACACTATCCTCAGACAATGATAGTAACCAGTGGTCCTCTTCATCATCATACTTTATCCAGTTATAGTAAAAATGGGACATTGGATGATGAGCAATATACTGATGCACCATATGACTATTATGAATACTATGCTGGATATGTTGATTCGCATGGATTTTCCTGTATTTATGAAAATTATGGAGCTAGCATTCTTCCTGTGTTATACTCCCTGTTTTTTGTGGTGGGCTTTCTGGGTAACATAATGGCTATCTGTGTGGTCTCGATGGGTGTGAGGCTGAAAAGTATGACCGACATCTGTCTTCTGAACCTGGCTATTGCTGACCTGCTCTTGGTCTGCTCGCTCCCCTTCTTGGCACACTATGCCAGAGACCAGTGGATCTTTGGAGATGTTATGTGCACTATAGTCCTTAGTGTCTACCACATTGGATTCTATAGTGGGATATTCTTTATTGTACTGATGAGTGTTGATCGGTATTTAGCTGAAATTCATGCTGTGTTTGCTATAAGAGTCAGAACAAGGACATATGGAATCTCAGCAAGTGTGGTCACATGGATTGTTGCTGTTTCTGCATCCTTTCCTGAGTTGACACATCTAAAAACcacagaaaacaataaacaaaaatattgtatatcTTACACAACAAATTATCAAAATTCTTACCTTTCTTCAAGGACTTTTGGTATCTTGAAAATGAATCTTATGGGTTTAATTCTTCCTCTTATTGTGATTGTATTTTGTTACTCAATCGTTTTAAAGAGACTCCTAACAGCTCACTCTACCAGGAGGCGGTCCATGCACCTTGTCATTACTATGATGGTGGTCTTCTTCTGCTGTTGGGTTCCATACAATGTCACAGCTTTTGTGAAAGCCTTAGAACTAAATGAGCTTATAACTCAATCTTGTGACAGCAGTAAGGCAATTAGTCTAACTTTGCAAATCACAGAAGCTTTGGCTTATTCACACAGTTGCCTGAACCctattttgtatgtgtttgtaagAGAGAAATTTAGaaggaatttttttaaactgctgtaCAGGATACCTTGCACTAGACTGAAATTCGTAAAGAAGTATATTACACAGACCACTGTAACAGTTTACTCACACAGCACCAGTGATGAGAGAATTAGTACAACAATTTAAATTGGGAAAAGAATGCAGGGCTGTCACACCATGCCCTATGTTAAAGAAACAAATTTAGGACAGTCctgtttaaatgtacatactAATTTGTTTTCTACCAATCTACCAACATTGATGTAATGATTTGGGGAACTCTAATTCTGGCACACTTTggactctgtgttgttgttttcatgtcccATGTGTTCGgtaatttcagttaattgtcttattgtgttcagctgtgtcttgttaatttagtaatttactttgcttttaagtccagtttgtttcagtttagGTGGTCTGATTGTCATCCTTTGATGCGTGTGGTTTCTGTTGAtcttcctgcctgcctgtatgtttatttgtttgttactttgtttaagattaaaagttattaagaTTA

Function

NR:

description
PREDICTED: C-C chemokine receptor type 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261958.1 True 1831 mRNA 0.36 2 10465273 10467230

Neighbor

gene id symbol gene type direction distance location
ca14 LOC107757442,LOC107566279,LOC107691873 coding upstream 6854 10424400 ~ 10458419 (+)
LOC122361033 NA coding upstream 133306 10328286 ~ 10331967 (+)
dnah5 dnah5,LOC107751901,LOC107664631,LOC107746973,LOC107684226,LOC106579813 coding upstream 180322 10195677 ~ 10284951 (+)
si:cabz01093077.1 NA coding upstream 385698 10078572 ~ 10079575 (+)
pomgnt2 LOC107732433,LOC107551215,LOC107657577,LOC107751881,LOC107601673,LOC107704096 coding upstream 592288 9860197 ~ 9872985 (+)
taf2 taf2 coding downstream 3800 10471030 ~ 10491879 (+)
LOC122360809 LOC107692009,LOC107742337,LOC107591288,LOC107709507,LOC107662260 coding downstream 153797 10621027 ~ 10649101 (+)
LOC122360810 triob,LOC107746974,LOC107751902,LOC108429234 coding downstream 295521 10762751 ~ 10800221 (+)
LOC122361031 LOC107684222,LOC107746965,LOC107551211,LOC107704084,LOC107751910,LOC107601660 coding downstream 416995 10884225 ~ 10886466 (+)
LOC122360813 LOC107746978,LOC107684223,LOC107551206,LOC107751909,LOC107704083,LOC107601659 coding downstream 423090 10890320 ~ 10891979 (+)
G111232 NA non-coding upstream 62233 10400269 ~ 10403040 (+)
G111230 prpf3,LOC107566278,LOC107555801,LOC107572828,LOC107677690 non-coding upstream 68170 10395908 ~ 10397103 (+)
G111163 NA non-coding upstream 367031 10097793 ~ 10098242 (+)
G111152 LOC107746964,LOC107551210,LOC107684220 non-coding upstream 418909 10030615 ~ 10046364 (+)
G111119 NA non-coding upstream 512909 9947351 ~ 9952364 (+)
G111250 NA non-coding downstream 25139 10492369 ~ 10492857 (+)
G111261 NA non-coding downstream 85042 10552272 ~ 10552828 (+)
G111271 NA non-coding downstream 103429 10570659 ~ 10570968 (+)
G111394 NA non-coding downstream 692894 11160124 ~ 11160804 (+)
G111417 enpp2,LOC107697648,LOC107574906,LOC107681346,LOC107757440,LOC107745056,LOC107574778,LOC106573026 non-coding downstream 746556 11213786 ~ 11222969 (+)
G111161 LOC107746965,LOC107684222,LOC107551211 other upstream 391222 10073675 ~ 10074051 (+)
G111122 NA other upstream 500887 9963105 ~ 9964386 (+)
ctnnb1 ctnnb1,LOC107570993,LOC107701997,LOC107751892,LOC107748497 other upstream 1077882 9356432 ~ 9387391 (+)
LOC122360022 cpq,pgcp other upstream 1233390 9192080 ~ 9231883 (+)
vamp1b zgc:92912,LOC107596691,LOC107656704,LOC107741978,LOC103044039,LOC105912972,LOC108268517,LOC108429010 other upstream 1524661 8934051 ~ 8940612 (+)
enpp2 enpp2,LOC107757440,LOC107697648,LOC107574906,LOC107745056,LOC107681346 other downstream 25804 10493034 ~ 10509575 (+)
LOC122361026 LOC107708300 other downstream 203727 10670957 ~ 10728460 (+)
LOC122360811 cobl,LOC107746964,LOC107684220,LOC107551210 other downstream 359373 10826603 ~ 10851438 (+)
G111415 LOC107757440,LOC107697648,LOC107574906,LOC107745056 other downstream 737727 11204957 ~ 11211267 (+)
LOC122359964 pde11al,LOC107743218,LOC107684552,LOC103364058,LOC107685581,LOC107596730,LOC107550795,LOC107744711,LOC108441531 other downstream 1058066 11525296 ~ 11542239 (+)

Expression


Co-expression Network