LOC122360809 (LOC107692009,LOC107742337,LOC107591288,LOC107709507,LOC107662260)


Basic Information

Item Value
gene id LOC122360809
gene name LOC107692009,LOC107742337,LOC107591288,LOC107709507,LOC107662260
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 10621027 ~ 10649101 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261670.1
ATGACGAAACACAGACAGTTAGTTGATGCCATTGATGCCACAGTTGATGATGTGCTAAGCGCCTGTGTAAACAAGTACCCTGACGCTGCCATCATCGTGGCTGGAGACTTTAACAAGAATAACCTCAGACAGGAAATGCTCTGTTCCAATGGTTGTGGGTTTTACGGCAATCCGCGTAATAACGGCATGTGCTCGGTGTGCTACAAAGACTCCTTACAGCGACAGAACAATAGCGGCAGGTCCAGCGATCCAGTGTCTTCCAGCCTTAGCAGTAAAGGAGAATCTGTGACCGTACAATCGACGTCACAGCATGAGCAGAACAGTCAGAGTTTTTCAAcgccagcagcagcagtagtTACACATAAAGAAGGTGCTTCAGCAGCTCAATCAGGCCCGAAAACACCAGAAGAAGTGTCGTGCAGTAAATTGAGGAGAAACATCCAGGAGTCCAAGGCGGGTAGCTCATCGCCGGAGGATTGCATATCGAGAGGAAAGAGGAAGCTTGACGAAACTTGCCAGCCCATAGAAAGAGTGTCTGCCTCAGATGTCTCGGAGCAAACCTCAGATGTACCAGAGCAATCCAGACCCAAGAAAAACCGGTGCTTCTCTTGCCGCAAAAAAGTGGGGCTCACTGGCTTCGACTGCCGGTGCGGACACTTGTTTTGCAGCATCCACCGATACTCAGATACTCACAGCTGTAGCTTCGATTACAAGGCCGATGCAGCTGAGAAGATAAGGAAAGAAAACCCTCTTATTGTTGGGGAGAAAATCAAGAAAATCTGAGTTAAggattgcaattttttttttttttttttttttttttttttttgttaccctCTTTACCTTAAAACCTTGAATTGTGCATGCTACAATGAAACACATACGCAAA

Function

NR:

description
PREDICTED: AN1-type zinc finger protein 6-like

GO:

id name namespace
GO:0003677 DNA binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261670.1 True 889 mRNA 0.46 3 10621027 10649101

Neighbor

gene id symbol gene type direction distance location
taf2 taf2 coding upstream 129148 10471030 ~ 10491879 (+)
LOC122361027 LOC107566274,LOC107757437,LOC107697650 coding upstream 153797 10465273 ~ 10467230 (+)
ca14 LOC107757442,LOC107566279,LOC107691873 coding upstream 162608 10424400 ~ 10458419 (+)
LOC122361033 NA coding upstream 289060 10328286 ~ 10331967 (+)
dnah5 dnah5,LOC107751901,LOC107664631,LOC107746973,LOC107684226,LOC106579813 coding upstream 336076 10195677 ~ 10284951 (+)
LOC122360810 triob,LOC107746974,LOC107751902,LOC108429234 coding downstream 113650 10762751 ~ 10800221 (+)
LOC122361031 LOC107684222,LOC107746965,LOC107551211,LOC107704084,LOC107751910,LOC107601660 coding downstream 235124 10884225 ~ 10886466 (+)
LOC122360813 LOC107746978,LOC107684223,LOC107551206,LOC107751909,LOC107704083,LOC107601659 coding downstream 241219 10890320 ~ 10891979 (+)
LOC122360815 adcy2a,LOC108429235,LOC103367001,LOC108272199 coding downstream 309204 10958305 ~ 10978258 (+)
LOC122360820 fam188a,LOC107738860,LOC107689882,LOC107681582,LOC107549210,LOC107717794,LOC107593720 coding downstream 763766 11412867 ~ 11430889 (+)
G111271 NA non-coding upstream 50059 10570659 ~ 10570968 (+)
G111261 NA non-coding upstream 68199 10552272 ~ 10552828 (+)
G111250 NA non-coding upstream 128170 10492369 ~ 10492857 (+)
G111232 NA non-coding upstream 217987 10400269 ~ 10403040 (+)
G111230 prpf3,LOC107566278,LOC107555801,LOC107572828,LOC107677690 non-coding upstream 223924 10395908 ~ 10397103 (+)
G111394 NA non-coding downstream 511023 11160124 ~ 11160804 (+)
G111417 enpp2,LOC107697648,LOC107574906,LOC107681346,LOC107757440,LOC107745056,LOC107574778,LOC106573026 non-coding downstream 564685 11213786 ~ 11222969 (+)
G111438 NA non-coding downstream 611991 11261092 ~ 11261370 (+)
G111456 NA non-coding downstream 684053 11333154 ~ 11333678 (+)
G111484 LOC107581612,LOC107752837,LOC107662667 non-coding downstream 792090 11441191 ~ 11443232 (+)
enpp2 enpp2,LOC107757440,LOC107697648,LOC107574906,LOC107745056,LOC107681346 other upstream 111452 10493034 ~ 10509575 (+)
G111161 LOC107746965,LOC107684222,LOC107551211 other upstream 546976 10073675 ~ 10074051 (+)
G111122 NA other upstream 656641 9963105 ~ 9964386 (+)
ctnnb1 ctnnb1,LOC107570993,LOC107701997,LOC107751892,LOC107748497 other upstream 1233636 9356432 ~ 9387391 (+)
LOC122360022 cpq,pgcp other upstream 1389144 9192080 ~ 9231883 (+)
LOC122361026 LOC107708300 other downstream 21856 10670957 ~ 10728460 (+)
LOC122360811 cobl,LOC107746964,LOC107684220,LOC107551210 other downstream 177502 10826603 ~ 10851438 (+)
G111415 LOC107757440,LOC107697648,LOC107574906,LOC107745056 other downstream 555856 11204957 ~ 11211267 (+)
LOC122359964 pde11al,LOC107743218,LOC107684552,LOC103364058,LOC107685581,LOC107596730,LOC107550795,LOC107744711,LOC108441531 other downstream 876195 11525296 ~ 11542239 (+)
LOC122360824 dnah11,dnah9,LOC107596639,LOC107685550,LOC107743202,LOC107740597,LOC107677540 other downstream 1457010 12106111 ~ 12137846 (+)

Expression


Co-expression Network