si:ch211-257p13.3 (si:ch211-257p13.3,LOC107685558,LOC107596636,LOC107743172,LOC107752836,LOC107581541,LOC107673049,LOC108271642)


Basic Information

Item Value
gene id si:ch211-257p13.3
gene name si:ch211-257p13.3,LOC107685558,LOC107596636,LOC107743172,LOC107752836,LOC107581541,LOC107673049,LOC108271642
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 12478548 ~ 12491916 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261759.1
CTCAAACACtgctgaggagagagagaggaagggggaggagagaggaggagaagaaggaggGGAAAAAGGAAACCAGGAATAGCAGGTTGGACAGATGTGCGGAGTCAAGAGCTGGTGTTGCCATCCAAATCCCTGGGAACAGGCACAGAATCATCATGTAGAGCTTCAAAGACGAAGAATGAGAATGCAGTGACTGCGGTTGTTGAGGATCAACCTCAAGCAGATGTGTGAGAAGAGCGGAAGCATGCTGTGAAGCCAAAGCATTTATTTCCAGCCGCTGTCGCACCTCAGGAAACATGTATGCCTTCTATTCTCTGCTGGTGTACATCTTCTACACTGTTTTcaaaaaggaggaggaggcagCACTCGAGGGGGCGTGCGGAGAATCCCCGGAGGAGCCTGGCCATGTTTCCATGGAAACAGAGAGCAAGGGGAAGGGTAGCCACACCCCCAGGTTGGGTAAAAGAGGGTGTGCAATTCTGAGTGATTCAAGCAGCAGTAGTGATAGCGATGGGACGTCCCTCAGTGATGAAGATGACGAGTTTGATGAAGGTCAAGGATTACCTGCTAAAACACCATTAACAGCTTTCCTGTCTTTCAAGCAAGAGGCAGAAAAGAGGAGAGCCACTAATTCTCCTGCAGAGCCAAACGAAAGGGTGACAGAGTCTCCATTGCTGTCCGTGATGTCACACCTCCTGAGTTTCCTGGAGCAATATTCTCACCTGCAACAGCTGCAGCAGCAGGCGGATCAGTACCGTCTGCAGCTGCGCAGACACCGCGTCCAGCACCGGAGGAAAATGAAGGCCCTGCGTGCCTCCTACCGCCAGCGCCTCAGAGACAAGAACAGTGTGATTAACAGCCTGGAGGATGTGATCGCTCAGCAGCAGAGCCCATCGTCTGAAAATGAGGGTGACTGCATGCTTCCTGCAGCGTCTCCGGTTGGGCTGCATACGTTGGTTCAGTCTCTCTGCGGGCTGCAAGTAGAGAAGAGTCAGCTGAGAGGAGAGCTGCGATTACTTCATTCCCAGATCGAGCAGAGAGAGCAAGATCGCCATACTAACGTACAGGCTTTCCAGCAGCAGATTGATGAGCTGAAGAGCTGTATtgaagaaagagaagaggagCTGTCGAAACTCAGAGTTGCATCGgGAGTAACAGACTCAGAAAAACGAGTGCTTTGCTTATCAGCAGAGAACGAGAGTTTGAAACACAGCCTCACGGTGACACAGGGTCTTCTGCAGCAGCTGTCAGTCATCCCATCCCAGTCCAGCTCCGTGCTCATCAAGGAAAACGAGAACCTGCGCAGTCGCGTCCTGCAGCTGGAGAGTTCACTGCAGCAGCGGGCAGAGCAGCTGTCACGTCTGGAGCACCAGAGGGAGCAGAGCGACTGGAGAAAAGCAGAAGAGCTCAGGAGACGGGAGGAGAGCGTGAGAGAGCTGCGGCTAGAACTGGACAAAGAACGCAGCAAAGAGCCTGTGGTTAAATATGTTACTCAAACTGTGGAGGTTGAGTCACCTTCAACTCTACGCCAACTATCCGAAGCCAAACAACAGAACGAACAGCTTTCTGAGAAGCTAAGCAATCAGAAAGATCGATGTCGGCAGTTGGAGGAGAACATCAGGCATTCAGATGAAGTCAGCTGCAGTTTGCAACACAAGATCGCTGCGTACGAGAGGGAGATTGGGACGTTAAGGGAGGAGCTGCTGAAGGAGATTGGACATcttgaggaaaagaaagaagcgGCTGTGAAAGCGGCAGCTAACTGCTCTCAGGAGCACCTCCAGAGCCTGCAGGACCAGTTCATAACCCTCCAGAAGCGTCTGAGTGCTCTGCCTCCCGCATTACGCACCATGAAGACAGATTACGCCAGCCTACGCAGCCAGGTCCGCAACTTTTCTGACTTCTACGGAACAGCTATCAAAGAAGCAAAGAAACAGATTATGGCAGCTATAAATGAGATGTCAGAGGCCAACAAAGACCTTTTGGAAAAGTATAGAAAGGAGGTATCTCTCCGCAGGAAGTACCACGAGCAGCTGGTTGAACTTAAAGGTAATATCCGTGTGCTGTGCCGTGTAAAGCCAGTACTGAAGGAAGATCAACATGAAGAAGGCCAAGCAGTAGTTGTGACAACAGACCCCAATAATGAGTCTGCGCTCACAGTTTTAAGCAAAGGAAAAGCCAAAAACTTTGAGCTGGATAAAGTCTTCCACCCTCAGGCCACTCAAGAAGAGGTGTTCCAGGAAATTGAGCCACTCATCACATCCTGTATAGATGGATATCACGTTTGCATCTTTGCTTATGGCCAGACAGGATCTGGCAAGACCCATACTATGGAGGGAACTGTTGAGAACCCCGGCATCAACCAACGAGCCCTAAAACACCTGTTCAATGAGATTGAGGAAAGAAAAGACATGTGGACATACACTGTCAGTGTCAGCTCGGTGGAAATTTACAACGAGGTCCTGAGAGATCTGCTCAGTAAGGATGGAGAGAAACTTGACATCAAGATCAACCCTGATGGGACGGGTCAGCTTCATGTGCCAGGACTCAGGGTCATGGAGGTCAAAAGCTTCCAGCATATCAAGAAAATTTTGGCCATAGCTCGAAAGAACAGGATTACATTTGGAACGCAGATGAACCAGCATAGCTCTCGATCTCACGCCTTGCTCACTGTGACTGTGCTGGGCACAGACCTCGCCAGTGGAGCCAAAACCACAGGCAAGCTGAATCTTGTGGATTTGGCTGGTTCTGAGAGGGTATGGAAGTCTGGGGCAGAGGGGGAGAGATTGAAGGAAGCCCAGAATATCAACCGCTCGCTGCTGGCTCTAGGAGATGTGATCCAGGCCTTGAAGGCGCACCAGACTCACATACCCTTCAGGAACTCACGACTAACCTACCTGCTGCAGGACTCGCTGGGAAAAGGCAACAAAACTGCAATGGTTGTTCAGattTCTTCCCTTGAGAGCAATGTTGGAGAGACCCTGTGCTCGCTAAAATTTGCCCAGCGAGTGTGTAAGGTGGAGCTGGGCCCCGCTGCACGAAAAATTGAGACAGGTGGACATAACGAAAGCAAAAATTAACGTATACCATCAACCCTCACAAACACCTAAATGGCATCAGCTCAAGCACAGATGGACAAGCCTAGCACTTTTCCAATCCTATTCAAGGGCTAACGTTCTGGATACATCTGTGATGCCACATAAGTTCCAGTTTCTTGCTAACTTACCTAGAAATGGCTTTTCTACACCAGCTGATCTGCATGTCAAAGTCTCACCAACACCACCGATATCAAGACGCTACGTCACCGTAAGTTCAAGACATTACAGAAAATTCTCCACAGGGAAGACTGGGGAGGATTTTTCAGTAAATCTTGCATAAAACAGCTTTGTGGAATCACTACACAAGAGTATCTCATTGTGTAATGCTTGAGGTTTTTACGGATATTTACTCAGAAACCTTTAAATTGTTTGGTATAATATATAGTCTAGGAAGTAATGGCcaaataatgtcttttttttgtgtatgtttggtGTGGACTTCTATGATTGTTAAGTGTGTTGAACCAGCCAATGTCTTTTATTAGGTTCAGAGGATGTTCAGGCAAATTGCACAAGATTTTATTTCTCTGACAGAGGTGGTGGTTTAGCGTTTCAAGGTCCAGGGTAATAACAATAAGGTCTCATTTTCAACCAATAGagcctcatttataaagtgtGCTTACGCAGATATTTGAAAATGGCTTCGACGTGGAAAAGTGTTTATCGTCACGCCGGGGTCTGAGTAATGTACTTATCTTTTCTTGTCGAAGTGCTGAAGGGTTTTTCTTTTGGAAAGTAAGCATTCTTGCAGCtcgctgtttttaattaaaggatGATAAATGGCTACTTAGGAGTCGTTTTCAAGGCAGAGAGCTGTAACCATTCAGTTGCGCATCACTTCGAGATCAGTTGCGATTCAAAGATTTCACATTTGAAGAGGCGCGTGTTCATTCTATGAATGACACGTATGTGTATTTGAGGGATAATTGCAAGAATGTTTCTGCGCAACATTTTATAAGTGAGGCCCCTAACAATGGTGATTTATGAACTGGCAGATTTTTGAGTCATTTGGTAACACCACTCTGTCACTGAAGGAGGAGAAAAAGCAAGGATCTGGATAAGAAACCATCTGCTAAAGATGAGAAAGAATGTATTAATACTTCACAGCATATTGTGTGCAGTAGCACCTCTTAGTGGTCAGCATctcctttttttggttttggccCAAATGAGAGTGACCACACGGAACAAAATTTTGCTGTTACCTTACGTTACTAAGcgttaattaaatattcattaattcGTAATAAACATATCAATatcaatgtatttaaattatatatgatgATTAACTTTCTAGGAATTTGAAGATAAGTTTACGTTtaatgtgaaattttattattgGTCTTTTAGTTCTAGTCAtgttacaggaggtgagaaatGCACTTTATTGTCAAAAGATTTGTGCCATCCATACAACTCGTCTTTTAACcaaaaacatactgtatgtttatcCATTTGTTTTGGGAAAATTTGCATCTTTTAAATAATGGCAGAATAATCctggaaataaaataagctgAGACTGATTTAACTCTTCTTTAATGTACTTGATTTTATTAAGTGCTTGAAGAGACTTGAGCCCATGTACAcactaatttgttttaaatatcttgAAACCAGAATAATGTACTGCAGTTTCATCTGTACTGTTCTGCTCGATTATGATATTGTATTCTTTTCTGTAATCTGTCTGCTTTTAGAACTCTCATATTAATGAGAAAAATACCACACGAAAATATGAATTTAGCCCTTCTTTATCAGCATtcaggttttgttttaaaacaagtgTACTGacattgaaaaatgtttttatcataaGGACCAGAAAGGAAAAAGACAGACaatttagaaaagaaagaacTGTTTActtataaacaacaaaataataataaaaaggaagtTGCCGTCTTTGTGTActctatataaaaatacaaaaactccTGTA

Function

symbol description
si:ch211-257p13.3 Predicted to enable ATP binding activity; microtubule binding activity; and microtubule motor activity. Predicted to act upstream of or within microtubule-based movement. Predicted to be located in microtubule. Orthologous to human KIFC2 (kinesin family member C2).

NR:

description
kinesin-like protein KIFC3

GO: NA

KEGG:

id description
K10406 KIFC2_3; kinesin family member C2/C3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261759.1 True 5046 mRNA 0.45 20 12478548 12491916

Neighbor

gene id symbol gene type direction distance location
LOC122360829 LOC107685595,LOC107743211,LOC107596711 coding upstream 7118 12465219 ~ 12471430 (+)
tnxba LOC107581611 coding upstream 14160 12455692 ~ 12464388 (+)
c4b LOC107752837,LOC107662667,LOC107581612 coding upstream 28418 12433949 ~ 12450130 (+)
LOC122360827 NA coding upstream 74143 12402516 ~ 12404405 (+)
fhod3b LOC107743170,LOC107685591,LOC107752839,LOC107581616 coding upstream 112564 12229223 ~ 12365984 (+)
nradd nradd,LOC107685559,LOC107743178,LOC107752834,LOC107673039,LOC107581538,LOC107596749 coding downstream 70832 12562748 ~ 12574040 (+)
rbm12bb LOC107596630,LOC107685561,LOC107673037,LOC107752831,LOC107581533 coding downstream 110825 12602741 ~ 12607176 (+)
gra LOC107743180,LOC107581534,LOC107685563,LOC107596633,LOC107752832 coding downstream 115414 12607330 ~ 12611688 (+)
upp1 upp1,LOC107685619,LOC107743234,LOC107596632,LOC107752846,LOC107672999,LOC108411965 coding downstream 121589 12613505 ~ 12616783 (+)
stmn2a stmn2a,LOC107596629,LOC107685565,LOC107581532,LOC107752830,LOC107673017,LOC108411963,LOC105009370,LOC108267159 coding downstream 126430 12618346 ~ 12624373 (+)
G111732 NA non-coding upstream 109948 12366968 ~ 12368600 (+)
G111667 NA non-coding upstream 494910 11983400 ~ 11983638 (+)
G111604 NA non-coding upstream 602279 11875703 ~ 11876269 (+)
G111588 NA non-coding upstream 605601 11871873 ~ 11872947 (+)
G111595 NA non-coding upstream 622077 11855009 ~ 11856471 (+)
G111810 NA non-coding downstream 64573 12556489 ~ 12557578 (+)
G111822 NA non-coding downstream 106998 12598914 ~ 12601094 (+)
G111978 NA non-coding downstream 574377 13066293 ~ 13103228 (+)
G111987 LOC107692542,LOC107596619 non-coding downstream 614370 13106286 ~ 13107154 (+)
G111998 NA non-coding downstream 649297 13141213 ~ 13146421 (+)
LOC122359987 LOC107685557 other upstream 2040 12474517 ~ 12476508 (+)
LOC122360650 LOC107685555,LOC107743206,LOC107596715 other upstream 87763 12379703 ~ 12390785 (+)
LOC122360824 dnah11,dnah9,LOC107596639,LOC107685550,LOC107743202,LOC107740597,LOC107677540 other upstream 340702 12106111 ~ 12137846 (+)
LOC122359964 pde11al,LOC107743218,LOC107684552,LOC103364058,LOC107685581,LOC107596730,LOC107550795,LOC107744711,LOC108441531 other upstream 936309 11525296 ~ 11542239 (+)
G111415 LOC107757440,LOC107697648,LOC107574906,LOC107745056 other upstream 1267281 11204957 ~ 11211267 (+)
nbeal2 nbeal2,LOC107596634,LOC107752840,LOC107685597,LOC107743212,LOC107673027,LOC107581539 other downstream 8155 12500071 ~ 12556358 (+)
mfap5 mfap5,LOC107692584,LOC107549447,LOC107672984,LOC107598402,LOC107744296,LOC107724932 other downstream 1039253 13531169 ~ 13544412 (+)
LOC122360452 cox6b2,LOC107744291,LOC107598404,LOC107692571,LOC107549480,LOC108432349,LOC108270780 other downstream 1114691 13606607 ~ 13609407 (+)
slc2a3b LOC107692573,LOC107724776,LOC107672969,LOC107744290,LOC107598389 other downstream 1119333 13611249 ~ 13619347 (+)
zgc:158701 LOC107598451,LOC107671172,LOC107755974 other downstream 1372705 13864621 ~ 13867229 (+)

Expression


Co-expression Network