LOC122360829 (LOC107685595,LOC107743211,LOC107596711)


Basic Information

Item Value
gene id LOC122360829
gene name LOC107685595,LOC107743211,LOC107596711
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 12465219 ~ 12471430 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261684.1
ATGTGTATCTCAGCGGTGAGTGTGGTGCTGTTACTCTTCATTTTGTGGATGCTTGTGGTCCAGCTCTGTAGACAGATTGACAGGCGATGTGATGGAGATGCCAAAGCAAGCAAACAACCAGAAGCGGCTGTTCCCAAACTACTGCATTGCTTTTCTAAGCGCTTCTGTGGCacactttctccctctcttcctGGTCCTCCTTCTCTCCCTTTGCTGGGCAACATGCTGGATCTCGCCCAAGAACATCTACCCATCCACCTGACTTCACTGGCACATCGCTATGGAAATATCTATCGGCTCAACTGTGGCAACACaaccatggtgatattaaataatagtgAGATCATCCGAGAGGCTCTGATTAAAAAATGGTCAGACTTTGCCGGGAGGCCTTATTCGTATACTGGTGATATAGTGTCAAGAGGAGGACGTAGCATTTCTCTGGGTGATTTCGGTGAGAAATGGAAGGCTCACAGGCGTGTGGCCCACAGTGCTCTGCACCGCTGCACAATGGATTCCCTGCACTCAGTCATAGAAAAGCAAGCACACCATCTCTGCCAGGTGTTGCGGAACTACAGTGGAAAAGCAGTGGATTTATCTGAAGATTTTACTGTGGCTGCGAGTAATGTCATCACAACACTAAACTTTGGCAAAAGTTATGATAAGAGTTCAGCAGAACTGCAGAAGCTGCAAGACTGTCTGAATGAGATTGTGTCTCTCTGGGGTTCACCTTGGATCTCAGCGCTGGACTCCTTCCCTCTGCTCAGGAAATTACCCAACCCTCCATTCTCTCGCCTCATGAAAGAGGTAGCCAGACGCGATGAGCTGATAGGGAAACACATTGAAGATTTTAAGAAAAGTAACCATAAAGAAGGTGGCACAGTGACTTCCTCACTTCTGCGGAGCTTGGAACCGCCACAAGGGGGAGCCAATCAGGTGACTCTGACAGACACTCATGTGCACATGACCACAGTGGATCTGCTGATTGGAGGGACAGAAACTACTGCTTCCTTGCTCAACTGGACCGTGgccttccttttacacagaccTGAGGTTCAGAATAAAGTGTACAAGGAGCTGTGTGATGTGCTGGATGTGCGTTACCCTCAGTACAGTGACCGACACAGGCTGCCGTATCTGTGCGCTCTGATCAACGAGATGTTAAGACTTCGACCTGTTGCTCCCCTCGCTGTGCCTCACAGAGCCATACGAAACAGCAGTATTGCAGGCCATTACATCCCCAAGAATACAATAATCATTCCTAATCTGTATGGTGCCCATCATGATCCAGAGGTCTGGGATGATCCATACAGCTTCAAACCAGAACGCTTTTTGGAAGGTGGTGGAGGTTCCCTTCGTGCCCTGATTCCTTTCGGAGGAGGGGCCCGACTGTGTCTAGGAGAAGCAATAGCCAAAATGGAGTTGTTTCTTTTCACAGCCTATCTGTTGCGAGACTTTCAGTTCCTGCCTGCCAGTAAAGAGGAGCCTCTGCCTGACCTGCGAGGTGTCGCCAGTGTGGTTCTTAAAGTCAAACCATACACCGTTATAGCACACCCAAGAGAACCacaatgttaa

Function

NR:

description
PREDICTED: steroid 21-hydroxylase-like

GO: NA

KEGG:

id description
K00513 CYP21A; steroid 21-monooxygenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261684.1 True 1575 mRNA 0.49 12 12465219 12471430

Neighbor

gene id symbol gene type direction distance location
tnxba LOC107581611 coding upstream 831 12455692 ~ 12464388 (+)
c4b LOC107752837,LOC107662667,LOC107581612 coding upstream 15089 12433949 ~ 12450130 (+)
LOC122360827 NA coding upstream 60814 12402516 ~ 12404405 (+)
fhod3b LOC107743170,LOC107685591,LOC107752839,LOC107581616 coding upstream 99235 12229223 ~ 12365984 (+)
LOC122360825 LOC107752854 coding upstream 257884 12202977 ~ 12207335 (+)
si:ch211-257p13.3 si:ch211-257p13.3,LOC107685558,LOC107596636,LOC107743172,LOC107752836,LOC107581541,LOC107673049,LOC108271642 coding downstream 7118 12478548 ~ 12491916 (+)
nradd nradd,LOC107685559,LOC107743178,LOC107752834,LOC107673039,LOC107581538,LOC107596749 coding downstream 91318 12562748 ~ 12574040 (+)
rbm12bb LOC107596630,LOC107685561,LOC107673037,LOC107752831,LOC107581533 coding downstream 131311 12602741 ~ 12607176 (+)
gra LOC107743180,LOC107581534,LOC107685563,LOC107596633,LOC107752832 coding downstream 135900 12607330 ~ 12611688 (+)
upp1 upp1,LOC107685619,LOC107743234,LOC107596632,LOC107752846,LOC107672999,LOC108411965 coding downstream 142075 12613505 ~ 12616783 (+)
G111732 NA non-coding upstream 96619 12366968 ~ 12368600 (+)
G111667 NA non-coding upstream 481581 11983400 ~ 11983638 (+)
G111604 NA non-coding upstream 588950 11875703 ~ 11876269 (+)
G111588 NA non-coding upstream 592272 11871873 ~ 11872947 (+)
G111595 NA non-coding upstream 608748 11855009 ~ 11856471 (+)
G111810 NA non-coding downstream 85059 12556489 ~ 12557578 (+)
G111822 NA non-coding downstream 127484 12598914 ~ 12601094 (+)
G111978 NA non-coding downstream 594863 13066293 ~ 13103228 (+)
G111987 LOC107692542,LOC107596619 non-coding downstream 634856 13106286 ~ 13107154 (+)
G111998 NA non-coding downstream 669783 13141213 ~ 13146421 (+)
LOC122360650 LOC107685555,LOC107743206,LOC107596715 other upstream 74434 12379703 ~ 12390785 (+)
LOC122360824 dnah11,dnah9,LOC107596639,LOC107685550,LOC107743202,LOC107740597,LOC107677540 other upstream 327373 12106111 ~ 12137846 (+)
LOC122359964 pde11al,LOC107743218,LOC107684552,LOC103364058,LOC107685581,LOC107596730,LOC107550795,LOC107744711,LOC108441531 other upstream 922980 11525296 ~ 11542239 (+)
G111415 LOC107757440,LOC107697648,LOC107574906,LOC107745056 other upstream 1253952 11204957 ~ 11211267 (+)
LOC122360811 cobl,LOC107746964,LOC107684220,LOC107551210 other upstream 1613781 10826603 ~ 10851438 (+)
LOC122359987 LOC107685557 other downstream 3087 12474517 ~ 12476508 (+)
nbeal2 nbeal2,LOC107596634,LOC107752840,LOC107685597,LOC107743212,LOC107673027,LOC107581539 other downstream 28641 12500071 ~ 12556358 (+)
mfap5 mfap5,LOC107692584,LOC107549447,LOC107672984,LOC107598402,LOC107744296,LOC107724932 other downstream 1059739 13531169 ~ 13544412 (+)
LOC122360452 cox6b2,LOC107744291,LOC107598404,LOC107692571,LOC107549480,LOC108432349,LOC108270780 other downstream 1135177 13606607 ~ 13609407 (+)
slc2a3b LOC107692573,LOC107724776,LOC107672969,LOC107744290,LOC107598389 other downstream 1139819 13611249 ~ 13619347 (+)

Expression


Co-expression Network