LOC122360825 (LOC107752854)


Basic Information

Item Value
gene id LOC122360825
gene name LOC107752854
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 12202977 ~ 12207335 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261682.1
AGCTCGGATTCCCCGCATAGAAGTCAGCGGTGGATGTCGGCCAACAGGTGTTTACATGTAATCGATAGTCGTCTATAACCAGAAAAAGTGCGAAGCTCGTTTACACACAGCAGACATCGTGACAATGGCAGACACATCAGAATTCACTACAGCAGCTCATCTGTACTATAGAGAACCAAAATCATCAGGAGCCTTCGGACATTGAACCTGAAGTCTCTCTTTCATCAGATGAACATCTCGCTGTTCATTCTGAAGCAGATGTCCTCCACTCATCAGTATGGAGTGACCATGTCGCTCAGACTCCAGTCGATACTGCATCAGACTGGAGCGCTGACATCCTTCGTACTGCATCTGACTGCAGCATCAATGCCAGCTTGTCTCCAGTCTTTAGCATGTTGAACTGGAGTGGCGATTTTGGCAAGACGTCATCTGACTGGAACATTTACGACGGCCTGACTCCAGCACGCACTGCATCAAACTGGAGCGTTGATGTCAACCAAACTCCAGTACGCACAGTGTCAGACTGGAGCACTGACATCCTTCGTAGTGCATCTGACTGCAGCATCAATGCCAGCTTGTCTCCAGTCTTTAGCATGTTGAACTGGAGTGGCGATTTTGGCAAGACGTCATCTGACTGGAACATTTACGACAGCCTGACTCCAGCACGCACAGTGTCAGACTGGAGCGCTGACATCATTCGTACTGCATCTGACTGCAGCATCAATGCCAGCTTGTCTCCAGTCTTTAGCATGTTGAACTGGAGTGGCGATTTTGGCAAGACGTCATCTGACTGGAACATTTACGACGGCCTGACTCCAGCACGCACTGCATCAAACTGGAGCGTTGATGTCAACCAAACTCCAGTACGCACAGTGTCAGACTGGAGCACTGACATCCTTCGTAGTGCATCTGACTGCAGCATCAATGCCAGCTTGTCTCCAGTCTTTAGCATGTTGAACTGGAGTGGCGATTTTGGCAAGACGTCATCTGACTGGAACATTTACGACAGCCTGACTCCAGCACGCACAGTGTCAGACTGGAGCACTGACATCCTTCGTACTGCATCTGACTGCAGCATCAATGCCAGCTTGTCTCCAGTCTTTAGCATGTTGAACTGGAGTGGCGATTTTGGCAAGTTGTCATCTGCCTGGAACATTTACGACGGCCTGACTCCAGCACGCACTGCTTCAAACTGGAGCGTTGATGTCAACCAAACTCCAGGAGCGTCAGACTGGAGCACTGACATCCTTCGTACTGCATCTGACTGCAGCATCAATGCCAGCTTGTCTCCAGTCTTTAGCATATTGAACTGGAGTGGCGATTTTGGCAAGACGTCATCTGACTGGAACATTTACGACGGCCTGACTCCAGCACGCACTGCTTCAAACTGGAGCGTTGATGTCAACCAAACTCCAGTACGCACAGTGTCAGACTGGAGTGTTGACATCACCCATACTCCAGACCGCGCCGCTTCTGATTGGAGTGCTGATATCGCTCAGACTCCAGTCCGGCGCACCCCTTCCGATTGGAGCATTGCCCAGACTCCAGTCTACAGCACATCAAACTGGAACGCCAATGTCATCCAAACTTCAGCTTGTTCCGCAGAGGTCTCTGCGTCACCTCTGACAGGGCAGCTGGAGAAAAATGGAAAGATGAAAATTGAGGtCATCAATTCCTGCCACTATGTGATTGGTGATATGCTGGGTGAAGGGAGTTTTGGAGCCGTATATGAGGGGAGTCGTCTGCAGGATGGCTTTaaggTAGCACTGAAATATGTCGGAAAGACGGAGAATGTGGAATACATCAGTATCCCGGATTATTCCAAGCCTCTCCCAATAGAGGTGGCACTGCACATCCTCGCCAACAGAGGCCCCAGCATTCCAGAAATAATCCagctgctggactggcaggaCCAGCATGACCATTATATTATGGTGATGGAGCGTCCCTCACCCTGCGAGGACCTATTTGAATTTGCGGAACGCCACGGAGGCAGCATCGATGAAGACTTGGCTCGTATCATCGTGAAGCAGGCAACGCAGGCTGCCTATATGTGCTGCTGTCGTGGGGTACTACACGGCGATATCAAACTTGAAAATCTGCTCATTAGTAGGGAGACCCATGAAGTCAAGCTAATTGATTTTGGGTGTGGCGACTTCCTTAAGAAATCGGCCTACAAGATATTCATCGGCTCTGATCAGTACTGCCCCCCGGAGTTTTACGAGAAGGGTGAATACAATGGGAAGCCAGCAACAGTCTGGTCCCTTGGCGTTCTCTTGTTCGCATTGGTGTTTGGGGATTTTCCCAGCGCTGATGACTTGTACAGGATCAATGCAAAGACCTTCTCCAAAGCTGGCTTGTCGGAAGAATGCTGCCAGTTGATGAGTTCTTGTCTCCAGCAAGAGCCGGAGCAGCGGCTTCAGTTAAGTGAGATTCTTCTCCACGACTGGTTTAAGctcACAGACGGAGATCCTAAAAACAGTGTAGTGAAAAGGACAGGTACCCCTATAGTGGCTCAACCCCCAAAATCCTTATCATTGCTCCAGAGGTTCTCGTCAAATCCACAAGCAAGGCAACTTCTCCCCAGAGTTCCCTGTTCTGGTTCCCTGTCCAGTTCCCGGTCCTGCCCAAATCTCCATTcaaagtaaacaat

Function

NR:

description
PREDICTED: serine/threonine-protein kinase pim-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261682.1 True 2653 mRNA 0.50 8 12202977 12207335

Neighbor

gene id symbol gene type direction distance location
LOC122360328 dnah11,LOC107743202,LOC107596639,LOC107685550 coding upstream 46367 12137994 ~ 12156610 (+)
abcb5 abcb5,LOC107581621,LOC107685549,LOC107596720,LOC107743201,LOC108414160,LOC108267330 coding upstream 167848 12019685 ~ 12035129 (+)
hdac9b LOC107743167,LOC107685547,LOC107728524,LOC107550838,LOC107684549 coding upstream 243630 11912106 ~ 11959347 (+)
ahr1a LOC107685546,LOC107596644,LOC107743164 coding upstream 301093 11888488 ~ 11901884 (+)
plekha8 plekha8,LOC107596648,LOC107743161,LOC107745377,LOC107550836,LOC107684546 coding upstream 367962 11824236 ~ 11835015 (+)
fhod3b LOC107743170,LOC107685591,LOC107752839,LOC107581616 coding downstream 21888 12229223 ~ 12365984 (+)
LOC122360827 NA coding downstream 195181 12402516 ~ 12404405 (+)
c4b LOC107752837,LOC107662667,LOC107581612 coding downstream 226614 12433949 ~ 12450130 (+)
tnxba LOC107581611 coding downstream 248357 12455692 ~ 12464388 (+)
LOC122360829 LOC107685595,LOC107743211,LOC107596711 coding downstream 257884 12465219 ~ 12471430 (+)
G111667 NA non-coding upstream 219339 11983400 ~ 11983638 (+)
G111604 NA non-coding upstream 326708 11875703 ~ 11876269 (+)
G111588 NA non-coding upstream 330030 11871873 ~ 11872947 (+)
G111595 NA non-coding upstream 346506 11855009 ~ 11856471 (+)
G111586 NA non-coding upstream 420841 11781781 ~ 11782136 (+)
G111732 NA non-coding downstream 159633 12366968 ~ 12368600 (+)
G111810 NA non-coding downstream 349154 12556489 ~ 12557578 (+)
G111822 NA non-coding downstream 391579 12598914 ~ 12601094 (+)
G111978 NA non-coding downstream 858958 13066293 ~ 13103228 (+)
G111987 LOC107692542,LOC107596619 non-coding downstream 898951 13106286 ~ 13107154 (+)
LOC122360824 dnah11,dnah9,LOC107596639,LOC107685550,LOC107743202,LOC107740597,LOC107677540 other upstream 65131 12106111 ~ 12137846 (+)
LOC122359964 pde11al,LOC107743218,LOC107684552,LOC103364058,LOC107685581,LOC107596730,LOC107550795,LOC107744711,LOC108441531 other upstream 660738 11525296 ~ 11542239 (+)
G111415 LOC107757440,LOC107697648,LOC107574906,LOC107745056 other upstream 991710 11204957 ~ 11211267 (+)
LOC122360811 cobl,LOC107746964,LOC107684220,LOC107551210 other upstream 1351539 10826603 ~ 10851438 (+)
LOC122361026 LOC107708300 other upstream 1474517 10670957 ~ 10728460 (+)
LOC122360650 LOC107685555,LOC107743206,LOC107596715 other downstream 172368 12379703 ~ 12390785 (+)
LOC122359987 LOC107685557 other downstream 267182 12474517 ~ 12476508 (+)
nbeal2 nbeal2,LOC107596634,LOC107752840,LOC107685597,LOC107743212,LOC107673027,LOC107581539 other downstream 292736 12500071 ~ 12556358 (+)
mfap5 mfap5,LOC107692584,LOC107549447,LOC107672984,LOC107598402,LOC107744296,LOC107724932 other downstream 1323834 13531169 ~ 13544412 (+)
LOC122360452 cox6b2,LOC107744291,LOC107598404,LOC107692571,LOC107549480,LOC108432349,LOC108270780 other downstream 1399272 13606607 ~ 13609407 (+)

Expression


Co-expression Network