CI01000001_07071090_07114820 (VPS13D)


Basic Information

Item Value
gene id CI01000001_07071090_07114820
gene name VPS13D
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 7071008 ~ 7114820 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_07071090_07114820.mRNA
ATGGCCCTCTATGCTATTGTAGGCAGGCTGGGATTATGTGGTTGCACACGACCAGCCAGGGGGATGCAGAGCTCCACATGTGCTGGGATTATTGTTATTTTATGTGCTCGGCAGAAGAGTGGCATATTTCATCTCAAGATATATGGCAAACAGTTCTTATGTCTACTTGCCGCTCAAATGTATGGGGGGAGCTGCGGCTTGTTATATAAGGATCTTAAAAAAGAAAGGAGATATTTTACTTTCTCCTCAGCCGGCAAGGACAGCTTCGCTTCCGAGAGGGGGACTCTGCTTGGCTTGGATAGTGGAGGGGCAGTGGAATTGGAGAATCTCCCACTAAGAAAAGATGCACTCCGAGGATTTGATCTGCCCTTTGAGGTCAAAGCAGGTGTTATTGGGAAGATCACCCTCCAGATTCCCTTTTATCGACCACACAGTGACCCATGGGTCATCTGCATGTCCCAGCTGAACCTGATTGTTGGCCCTGCCCCCCCACAGGAATATGATGAGGTGCAAGAAAGGGAAGCTGAGAAAGAGCAAAAGAAACAGCTTCTCAAGGTGCTAGAGGACAAGTGGAAGTTGAAAATTCAAGGCGTCCACTTACGTTTTGAAGATGATTTCTCCAACCCTGAGAAACCATATGCTTTTGGTGTTTGTATCAAGAATGTATCCGCACAGAACTGCTCCAAAGAACCAGCTCAGAAGCTTATTCGGCAGAAGGAGCTGGAAATCAGTGAATTCAGTGTGTACTGGGACACAGAGTGCACCATTCTTGGAGATCTTCCCTCAACAGAAGTACAGGAGCTGATGAGTAAATGTATGCAGAACCGTGAGCATCAGTATATATTTGAGCCAGTATGTGCCTCTGTGCTGTTGAGGAGAAATGCCTCAAAAGAACCACTACGATCTCGTAATACGCCTCGCATTGAGGGCCAAGTACAGTTGGAACCCCTCTCACTTCGTCTCTCACAGGTTCAGTATCAACAGATCATGGCATTCCTCAAAGAACTGGAGCGACGAGAAAGGGAGATTCTTTTTCGAAAGTGGAGACCTAAAGTTCCCATTTCTGGAAACTGTCGGCAGTGGTGGATGTTTGCCATTAATGCAAACCTGAACGAGATCAGAGAGCAGCGCAGACAGGGAAGCTGGGAGTTTGCTCTTCACAGGGCGCGTGATGCCAAACTCTACACTAGCCTGTATGTCCAGAGGCTTAAGGGAGATACTTTGAGTCCACAGGAGGAGAGTCTACGAGAGCCCATAATAAATGAGACCCCAGCCACCTCTCCCTCAGGCTCCATACCTAAAAGTGGGAGTTCAGGCATGATCCAGTATCTGCAGTCTTGGTTCCCAGGCTGGGGTGGCTGGTATGGGGGTAGTGAAAGAGATGACCTTTTACCAGGCACTGCCCAGTGGGAAATTCTTGCTGAGACAGATGATCTCTTTGATCCTTTGGAGGATTCACAAACACTGAATACCTTTACAAGAAGGGATCATCTCTTTGCACGGCTGGACTTTACCCTTGAGAAAGCAGCTGTCACCCTGTACCATCAAGATAAAATCAAACCTCTTTTGAGTGTGAAGATCAGCGTCGAGTCTCTTCCTCGCTCTGAGTCATCTTTACTCACAGTGAAACTTGGTGGGCTGTTTCTCCGGGATCTCACAACCCAGGGCTCCGTCTTTCCTGTCCTTGTTTCACCAAAACCGGATAAGGTTGTTGTTGCTATCAGTCAACCAACTAATATCGCAAAAATGGGCAATCTTGGCTCTGATGTAGAATCATCAGCACCTCCTGTCTTTGAGATGATTTATGAACGTAATCCAATAAGGAGCAAATTTGAGAGGAGACTGGAGGTCAATACCAGTCCTCTCAATATCATTTATAACCCTCAGGCTATCAAGAAAGTGGCTGAGTTCTTCTACAAAGGAAGGGTCCACACCTCCGGGTTTGGATATCAGTCTGAGTTAGAGCTGAGAGTGGCTGAAGCAGCCAGGAGGCAATACAACAAGTTGAAGATGCAAACCAAGGCGGAAATCAGACAAACCATTGATCAGCTGCTAGTCGGAGAGTTCATTGAGAACAGTAAGCACTGGACTATGAAATTGGATATATGTGCCCCTCAAGTCATCTTCCCAGATGATTTTCAGTCTGAAGACCCCATGCTAGTTGTGGTAGACCTTGGGCGTATTCTTCTTACTAATTCCCAAGAAGATCATAAAACAAACCATAAGACCTCTCAAACAGAAGGAGAGAGTGATGAAGAATTCCAGACACCACTAGCAACACCTCCTGGGACTCCACCTCCAGAGCAAGAGCTGGATGTCAAAGGTCAGGAGAGGCCCTGTGATATTACCAGCCTTAAGTCACCAGAAGGTGCCCAAATTGTCAGCAGGAACCTGTATGAGAAGTACTCCTTATCTTTCAATGACCTCCAGATCATGGTTGGCCACTATAAAGACAACTGGAAACATCTACAGGAGAGTGAAGTGGGCCCCACTCATGTGGTGGAGAAATTCAATGTCCTACTACAGCTAGAACAAAGACTGCGATACACGTCAGACCCTCAGTTCCCAGGGGCTGTTCTCTCAGGAACACTACCAGACCTCAAAGTGCACATCAACCTGGAGAAGATGACTGCCCTGAAAAGCTGCTTGGCTAGACTTGGTAATTCAGGGGCAGATGGAGGTGACAAGGAGGGGGAGAATCTTAGATCCCCTGACCCTCTTACACTTCGTCATGAGAAGATCTTTCAAAGAGAAGATAGTGATTGGAAGCTCCAGGGTTATGATAAAAGTCTTACCAAGAGTGTGATGACACTTGAGCAACATACTCGAGAGATGCTTGTGGAATCTAGACTTCTTCTTGTAGAGTTTAATATCAATTACATGCAACTTGGCATTGAAAGTGGGGGCCGGTATATTTCTGTCCTGAAAGTGTTTGGAACAAATGCACATTTCGTAAAGCGGCCTTATGATGCTATGGTTTCCCTCACAGTTCATGGGCTTTACCTTGTGGACACATTGCAGACGTATGGCTCTGACTTTGATCTTCTTGTTGCATCTCATAAACACCTAAGTTTCGATGTACCTACTGGAAGTCTTCGAGAAAGCCAGCCCACGTCACCTGTTTCACCAGACAGTAAATCTCCCGAACTGCCAGGTTTGCACAGGAACTCCTCAGATCTTGCTTTTGACAAGGCATCTCCACGGGGCTCTCCCCTGAGAGACCAGGAGGCTCTTATTAAGTTGGAATACCAGTTTGTCAGCTCAGACTGCCCCTCCATGAACTTGGACAGCTCTCTGCAGGTAACCTCCATGCAGGTCAACAATCTGGATATAATCCTTAACCCTGAAACCATGGTAGAGCTTCTGAAATTCCTTCAGCAGTCTTTCCCCAAAGAAGAAAACTCTCCAACACAACAGCTAACACCACTGCCTAATGGAGAACACAATGAGGACTATCAGTCCACTTATGTCCAGAATAAGGAGTTAACAGTTGAAATTCACAGGTTAAACTTGCTGCTTTTGCGAACTGTTACCACTGGGACTGTTCTGGGAAGTGAGAAGAAAGGCATGAAAATTGCTACGGCCAGTATAAATGGGACAAAAGTCAATGTTTCAATGGGAAGTCGGTTGGATGTCAATGGCTCTCTAGGATGCATTCAGCTTGTGGACTTGACTCAAGAAGGTGGCAAAAGTCAATTTGTGGTCAGTATTGGAAGTGTAGAAGACAGCTCCTCCACAGATGGTGTGGCATTCTTTCCCATTGCTGGCATGGCTCCCTCTGAAGCTTTGAGTTTCCGCTTTATGGAAAAGTCTCAGGGAGAATGCTCCCTTCAACTTCAGATGGCATCTTTACACTATAACCACTCAGCAAAGTTCCTGAAAGAGCTCAGTTTATCAGCAAATGAAGTGGAGGACAACTTCCGGTCTATGCTGAAGACTGCAGCTACAAAGGTCTCCACTGTATTGGCAACGAAAACAGCAGAGTACAGTGGTATGGTATCTCTCTTTGAGACCCCATACAGAAGATCTAGGAGACAGAGTCAGTCTAATTGGGCACTTGACCCTTTTGAGGAAGACGATTTCTGTGTGCCTGAAAAGGACCCAGGCTTGGATTCTTTTCTGGTCAAGCTGACTCTAGATGTCAGTATAGAATCCCCAGTTGTGTCTATTCCTAGAAAGCCTGGTCACCCTGAGCTGCTTGTTGGACATTTAGGGAGCATACGAATTCAAAACTTTATTACAGGGCAAGACTCAGAAGGGGAGAAACTGCAGGTTGAAGTAAAGAATATAAGACTCTATTCTGTCAACACAAACATGGTTTTAAGGAAAGGAGCACGACTTAACAGCAGCTCCACTTCTGGACCCTCACCTTCTCATGCCAACATTAATCTGAACGAGCTACAATTTACGCGGCATGACTTCTTTGAGTACTTGAGCAGAGGAAAAGCATTTCATATTTTAAAAGATGCCACCATCAAGCTCACTGTCGAGAAAGTCCCTGTTGATGAACACTCACACTTTACCTTTTTGTCAAGTGAAGAACCTTACCAGAGCACTGGGATAATGAGAGTGGAAGGCAAATTTGTTAATGCTGTCCAGGTGTGTCTTTGCAAGTCTGTGTATGAGCAGGTCCTTCAAACTCTCGATAATCTCTCCTTCATCGAAGATCAGCGAGTAACACCCAGTCAGCCCCCCACACCACCACCTCCTACACCCTCCTCCACTAAACCGCATCGCTTCCCTGATCTGCAAGGTGGGCTCTTTGCCCGTGACCCTCCTTATGTTGGCCTCTCTTACTCCTCATTGTCATCATCCCTTTCAGCAACACTTCCACTGCAAAACGAGAGCCCCCCTCTCCAGCCTCCTTCTTTTACCCAAGTGAGGGCCAACTTTCGGGTCTCTGAGCTGCAAGTGCAGTTGAGTGGAGACCTCAGCCAAGGATCTCAAGGGTTGGTCAGTCTGCGCTTTCAAGACCTGGAGGGAGACTTCACCAAAGACAATCCCCATTCAGTCTCCATCCAACTAGCCCTTCACTCCTTGTTAATGGAAGACCTGCTAGAGCCAAACCCTGAATCAAAGTACAAACACCTCATGGTGTCCAGAGGTGCTCCAAAGCCCTCCACCTTCAGTCCAAAGGAGTACCTGTCACAGTCGTGCCCAACAACATCCAATGTTCTGTACCCAGAAATGCCACGATCTCTTCCAGCGCAATTTGAAGAGGCACAGAATGTTTTCCAGTTGTATCAGAGGCACCCCAATACACCATCTGCATCCAGTCGAAAGAGCAAAAAGGATGCAGAGTGCCCCAGCACCCCTCCTCCATCCCCATCCCGCCAAACTCCATCTCCACACCCACGGTCAGACTTTGACGACTCTTTGGTACATATAAACGTGCTAATGGTTGATAGGCGGCACCCTGAGTTTAAAACACGGTATGGCAGCATTGGTCGTAGTGTAGATGTGGACTTCAACTGCCTTGATATTCTCATCACGCTGCAAACCTGGGTCATGATTCTAGACTTCTTTGGCATCGGCTCTACTGCTAATAACCATGCTGTGAAAGTGCCTACCACACCTCAGCCTATACCTGAACACTCACTGGAAAATAGTGCCCTCAGTGATTTGGAAGATTTGTATCCAGAGATTGAGGAAAGGGTCAATACAAAGCTAGATTTAAAGGTTCACTCTTTATCACTGGTACTGAGGAAGAAGACCAATGAGCTTGCTAAAGCTAGTGTCTCTAAACTCTTTACACATATGGAAATGATTGATGGAGATCTGGCATTGCAAGGAAGTCTGGGAAGTTTGTCACTGAGTGATTTGACACCCCACGGGGATCTATACAGAGAGCGTTTCACAACGCGTGGTGGAGAGGCCCTTGTCTACAACATATACAAGTATGGAGAACCTGACCCCTGCTTGCAGCGAGAATATGATATGAAGGTGTCTCTTCAGATGGCCTCAGTACAGTATGTCCATACCCAGCGTTTCCAGGCCGAGGTGGTGGCCTTCATCCAACACTTCACACAGCTACAGGATGTCCTGGGCAGGCAGAGAGCAGCCGTTGAGGGTCAGACAGTGCGTGATCGCCCACAGCGAGCTGCTCGTGTGCTGCTGGACATTGAGGCAGGTGCTCCTGTCCTCTTGATCCCAGAGAGCTCCCGCTCTAAACGCCTTATAGTGGCCAACCTGGGCCAACTCCGAGTGCGTAACTGTTTCCTGCCTGCCGGCTCTCGTGGCACCTTCTCTCTTAGAGATAAGGTAGAGAAACTTACAATGGCACATACCTTTTTCCCCTCTCTGGATCGAGTGAAAGATGCCCAGACTGCCTCTGATATTGGAAAGGCTAGTGAAAAACGGTCTTCAAGTTCCAGCACAACTACTGGATTTGTCCTGGGCAAACCCCAGCCCAGCCTCGGATGCATCCCAGAAGCAGATATGCCTTTGAGTCCAGAGGACCATGTATGTCTGCTGGACTGTATAGCTCTGGACCTTCAGGAGATGGACATATTTGCAGCAGAGCGGTTGCCCTGTGAGCCGTGGGACAGTGTTGGAAAGCATCTGGAAACAGACTTGGTCTTCCCATCCTACTCAGTGCGTAGAAGTGGAGAGAGCCTGCTGAAGGAGCGCTGCCGTCTAAAGCTGAAAGTTGAGCGCAACCTTGACAAGGAACTAAGTCATGCCGTCCCAGACATGTCCATCCATGGTAGCCTATCTTCTGTACACTGCTCCCTGGACCTGGAGAGATATCAGCTGATCCGCGGACTCTTGGAGCACAATCTGGGAGAGCCTGTGGAGGAGTTCCTCAGACCTTACAATCTCCAAGACCCCAGCAGCTATACCGTGTTAAGTGGTGATGTGTACACATCCCTGTCTCTTCTGGTGGACATGAAGGACGTCAGTCTGGAGTTACTGGACAACCCTAAATCCACAGGTCATAACCGCTCCTTGGCCAGGTTTGACTTTATGAAATCTAAGCTCCTGTTTGAGAGTTTCTCAAATAGCTCCAAGTCTGTGAACCTGGTGTCCCATTCGCTCCTGGCCCATGATACTCGATTTACTGGGTGCAGTGGACCAACAGAAGGAAAACACAATGTGTTCGACTGCATTCTGCAGCCATCTAAGACAGGCACCAATCGAGCATCTCTGCAGCTGGAGCTACATTACAGATCTACACGGGACTCCTCATGCTTCACTGTGGTTTTAAACAATCTGCGAGTTTTCCTCATTTTTGATTGGCTGCAGCTGGTGAGAGACTTCTTGCAGATGCCTGTGGAAAAAGGAGCAACACCTAACCGCCAGCGCTGGCCTAGTGGCAGCAGTGACCAAGGCGGCTCAGCGGCTGTCATGCCCAAAACTGTTAAGAGTGGTGTGGTCACTAAGCGATCCACTGTGCCGGTCACTCAAGATAAATACCTGGAGGTCAAACTCAATGTGACAGGGACAGAGTTTGTGGTCGTTGAAGATTCTTCATGTTTGGACACCAACGCTATCATTCTGAAAGGCACTACTGTGCTGACATACAAGCCTCGACTTCTGGACAGGCCTTTCTCTGGCAGCTTAGCAGGCATTGAGGTATTCTCATGTCGGCTGGGCAGCGAGCAGGAAACAGCTTTGTCCATCATTGATCCTGTCAATGTGCAAATGGAGCTCTGTGGCAGCCCAACGTACCAGAGCAGTTCAGGGCTCCTAGATGCCTTCAACATAGAGGACTTTCCACCTCTCTTAGAGATCCAGTTTCCTGCTCTAGACATCCGTCTTTCCTACAATGATGTGCAGCTTTTCCTGGCAATAGCAAAGTCCATTCCCACCACAGGATCCACTGGCCCTTCAGACACTGCCACAGAAGCTGAGAGTTCAGCATCCACTGCCAGTACAGACCCAAAGCACAGCTTCAGGCTCAAGACTGAGGCTTTACTGGAAGGTCAGCTAAAGCACTTACAGGACCTTGGGTTCAGGAAGGAAGACTGCAGACGTGCACTCATTCACTGCAGAGGTCAGTTGGACCAAGCTGCCACATGGCTGTGGGAGAATGCAGAGGCCATGTCGATCCGAAGCCGAGCTGACTCTGACTCCAGCAGCCACTCGGCTCCTCCCCTATCTGGAGTGGAAGTGAAGGCCGAGAGCGTCTGTATCTGCTTCATCGATGACTGTCTGGACTGTGACGTCCCTCTGGCAGAGCTCACCTTCTCACGCCTTTATGTTCTCCAGAGGATTGGGTCTATGCAGGAAGGCAAGGCTAGTTTCACTCTATCTGGAGATTATTACAACAGAGAACTCTCAGAGCAGTACAGCACCACCAAGACTTCGTGGTTGGCAGATTACTGCAAGGAAGACGAGCAGTCGCCACAGCCCTCCACCACTCTGTCTTGGATGGGATCGTCAGTGGACCCCCCCTCCTTTGGACAGAGTCTTCCTCTTGCCTACCTTAGAACTAGAAGCTCTACCAGCTTGACTTGTCTCGAGCAGCAGATTCATGCCCGAGCGGATATGAAGCTTTCCAAGAGGAGGCAGCCGTTTGTGCCATATGCCTTACGCAACCATACTGGCTGCACTTTGTGGTTTGCTACTCTTACTACTACACCAACCAGAGTGGCGCTATCTCACAGCAGTAGTGCCGACTCCATATCTGACGTGCATGGACCTGTGACAGATGATACGCACAACATCAGCCAGTGGAGAGAAGTGCTGCCGGGGGAGGAGATCCCGTTTGAGTTTGAGGCACGGGAGAAATTGAGACACAGACATACCCATGAGCTGAAACTCCACCAGCTGCTGGTGCGTGTTGTGGGCTGGGAGCAGGTGAAGCCAGTGTCAGTGGACAAGGTTGGAGTGTTCTTCCGCTACGCTGCCCCTGATCGAAACAACCCCTCGAACACTTTCTCAGCTTTGCCGCCTGTTAGAGTGGTTTTCTCTATCACTATGGAGGGCAGTGCACGTAAGGTCATTACGGTGCAGTCAGCGCTCACAGTTAAGAATCGCCTTGAGGTTCCCATGGAAGTGCGACTAGACAGCCCTTCGGCTCCAGACAAACCTGTTGTCCTGCCACCCATCCTGCCCGGAGAGGCCTTGGCCATCCCTCTCCATCTGACCTCTTGGAGGCTTCAGGCGAGACCTAAAGGCTTGGGGTTGTTCTTCTGTAAGATACCCATCCATTGGACTACTGTGGAGCGGCCTGGTGAGGTCAGCAGCGGCAAGAGAGAATGCCAGTCAGCAGACTTTGATGAACAACTCAAACGCAACTTCAGGTTTTGTGTCGTCATTAAGAAAGAAAACTACCCTGAACAGCAGCCTGCCAAAACTGTGTCGGGAGGTACAAAGCAGATCTACCGCCAACCAGGTCACACCATCTATCTGCTGCCCACCCTAGTGCTGGCCAACCTCCTTCCCTGTGACCTCAACTATTACATCAAAGGGACCTCAATCAAGGGAACCATGAAACCGGGCAAAGAGGCAGTGCTGCATGCAGCAGACACATCACAAAATCTAGAATTAGGTGTGCTCCTAGAGAACTTTCCTGTGTGTAAGGAGCTGCTCATCCCTCCTGGTACACAAAATTATGTGGTGCGCATGCGGCTATATGATGTCAACAAACGGCTGCTTTGTCTCACCATACGGATTATTCTCAGAGCCCAAGGAGCATTAAAAATCCTCATCTCTGCTTCCTATTGGCTTGTCAACAAGACTGGGCTGCCTCTGATCTTCCGTCAGGACAATGGGAAAACGGATGCCGCTGGGCAGTTTGAGGAGCATGAGTTAGCCAGGAGTTTGAGCCCACTGCTCTTTTGCTACACTGACAAAGAGCAACCCAATATGTGCACCATGCGAATCGGTAAAGGGATCCACCCAGATGGTGTTCCAGGATGGTGCCAGGGTTTCTCTCTGGATGGGGGGAGTGGAGTGAGAGCACTCAAAGTCATCCAGCAAGGCAACAGGCCTGGACTCATCTATAATATAGGAATAAATGTGAGAAAAGGGAAAGGGCGTTATCTTGACACACACATTGTGACCTTTGCTCCACGATACCTACTTGACAATCGATCATCTCACAAGTTAGCCTTCTCGCAGAGGGAATTTGTCAGAGGAAAGGGTACAGCAAATCCAGAGGGATATATCTCCACCCTGCCAGGCTCCAGTGTGGTGTTCCACTGGCCTAGAAATGACTACGATCAGCTTCTCTGTGTCCGTCTCATGGATGTACCCAACTGCACCTGGTCTGGAGGTTTTGAGGTCAACAAGCCTAAATCTTTCCACATCAACATGAGGGACATTTTAGGGAACTGCTTCTTCCTGCGTGCTGAGATTGCTTTGAAAGGGGCAACACATCAGATCTCATTCAGTGACACTGACCAGCTGCCCCCACCCTTCCGTATAGATAACATCTCTGAGGTGCCTATCCAGTTCTGGCAACATGGAGTGGCTGATATCCGGCTACACACAGAGGTAAAACCTGGGGCAGTTCTGGACTACGCTTGCGATGAACCCATTCTTCAACCCTACCTCACCCTCACTGTGAAGGGAGCCGGATCTTCAGAGGTTACCGCTGACATGAACTTCTTCAGAGAATACAACAAGCTCTACTACGAGAACTTTATCTACATTGCTGCATCCTTCACATTTTCAGAAGATGCAGGAAAAAGGCCAGTGGGGAAGAAGCGCGTGGTCAGCTGTGCTGAACTGGTGCTGGATGTGGAGACGAAAACACAGAGAGTCATCCTAAAGAAAAAGGAGCCTGGAAAGCGCTCCCAACTTTGGCGGATGACAGGAACAGGAATGCTCTGTCATGAGGGCTCATCTCCTCCACAGAGCAAACCTTCTCAGCCTCGACCTCTCAGTTCATCCTTAGTGCTTGACATTGCTGGACTGGCTGCAGTGACAGACAACAGCTATGAGCCTCTGATGTTGAGACGGCCAGACAACCGCCGCAGCACCACCCAGACATGGCACTTCAGCTCTGGCATGTTGACCTGTGGTTTGCCCAGACTAGTTGTCCAGGTAAGAGGGGGTGTGTCTGGCCTGTATGATGGTGCCGAGGTGGTACTGGGACCAGACTCTGGTGTTTTGGAACCAGCACCAGAGCAACAGTTTATCAACCAGAAAATGAGACCTGGCTCAGGGGTACTGTCCGTACAGGTCCTGCCTGATGGGCCCACGCGAGTACTACAGATCAGTGACTTTAACCAGCGGCGCATGAATAGACCCTCTCCCAGCACTGAGGAAGACCAGAATAAAGAGAGTGCTCAGACGAAAGTTTCTGTGGAGGAACTTGAGGTGTTGGTGAATCTAGAGGAAGGAGTGGGTTTATCACTGGTGAATAAGCTCCCTGAAGAGCTAGTGTTCGCTACCCTGTATGGCATTGATGTGCACTTCACCCGCACCGCTGCCAGCCAGGTGCTTGAACTTACAGTGAAAGATATTCAGGTGGACAATCAGCTCCTGGGCACCACTCACCCTGTTTTGCTGTCTGTGACTCCAGGCTCTGCTGAAAGTACTACAGTGGACACAGGTTCTGCTCTGCAGGTCAACGCTGTTAAAGTGCCCAGCAGTCTAATGCTCACAGACCTTTTTAAGCATCTGATGGTCACAGCACGCCGCTATACTGTCATCATTGAGGAAAAGCTCTTGATGAAACTGCTCATATTCTTTGGCTACGGTCAGGCAGAGGGAGAGGTAGAGAAGCTGGATGAGAACCTCTATGAGAAAGCCAGCGAAGATGCAGGAACTCCAAAGCGCTATTATTTTGAAAATTTGAAGATCAGTGTTCCTCAGGTCAAGCTGAGTGTCTTCACATCTCACAAGTTGCCCCCTGACCTCAAGTCTGCATTATGCTATGATGTGGTTGTCTGCAGTATAATCAAGCGTTATTCTGCACAGGCCTTGAAGGGAACCCTTGGGTTTCCACTCATTCGGTTTGAAGATGCAATCATTAACATGTACCCCTACACTCGAGTCCATCCCTATGAGACGCAGGAGATGATCATCAATGACATCCTTAAGCACTTCAAAGAGGAGCTTATCAGTCAGGCTGCTCAGATTCTGGGCTCAGTGGACTTCCTGGGAAACCCCATGGGCCTACTGAATGATGTCACTGAGGGTATGAATGAACTCATCAAGTACGGCAATGTTGGAGGGCTCATCCGCAGTGTTACACATGGTGTTTCCAACTCAGCTGCCAAGGAGAAGAATGGGAACAGCATTGGAAGCCAGCTCTCAGCATGTCTGTCTAACAGGCCATCGCACCATGTCCTTCATTGGCAGCCAGCTCACTGTCAGACAGCGCTTTGTGTGCTTTTCCCTCTGTCCATTCCCTCTGTGCTCTCATTTACTTTCCTTCCAGCCACACTCGCCAAGCTCATGCCTTATTTTGCAGGTACCTTATCAGATGGATTGGGCAAGACAATGGACAATCGGCATCAGACTGAACGAGAGTGCATTCGCTATCATGGAGCCACCAGTGGAGAGCATCTTGTGGCAGGGATTCATGGTCTAGCTCATGGCATCATTGGCGGTCTGACCAGTGTGATAACGTCAACGGTGGAGGGAGTGAAGACCGAGGGTGGTGTCAGTGGATTTTTCTCTGGTCTGGGGAAGGGACTGGTCGGCACAGTGACAAAACCTGTGGCAGGAGCTTTGGATTTTGCCTCCGAAACGGCACAAACTGTCAGAGACATGGCCAGCCTAAGCAACAGGAGTCCCAATATGTGGGTTTTTTGGATTGTGCCACAACAGGTGTTATTTCAAGAGACTCAGTTGTTCTCTTTAACGGGAAATGGGGGGAAAAGAGAAAAAAGGCTGAGCATGCAGCGAGTAAGGAAGCCGCGCTGCTGTAAGGGCCCTCAGGGACTGCTGCCTCGATTCTCCTCCCTACAAGCAGATGGACAAGAACAGCTCTTTCACTTAACGGATAATATCCACTCTGAATGTTTCATTGCAGTGGAGCCCATAGACACATACTGTGTGCTGATCTCCTCCAAAGTGGTGTATTTCCTCAAGCCTGGAGAATTTGTGGATCGTGAAGCAATCTTTTTAGAGGTCAAATATGATGATCTCTATCATTGTCTGGTGTCCAAGGACCACGGGAAAGTATATGTACAGCTTACTAAGAAAGCAGAAAACACTAGTAGTGGAGTGGCCATTCCAGGTCCATCACACCAGAAACCTATGGTCCACGTGAAAAATGAGAACCTTGCCATCAAGATTTCACAAGAAATCAATTATGCCAAGAGCCTTTACTATGAACAGCAGCTCATGCTGCCTCCCAGTGAGAATGAGGATAGCTTATTATTAGACTCTTAACTACACTGACCCGCAGGTGTTTCTTACTCATTTTTCAACAGCTACTTCCTTTTTTCTGTTTCTGTGGAAGGACAGTAATAAA

Function

symbol description
vps13d Predicted to be involved in mitochondrion organization; protein retention in Golgi apparatus; and protein targeting to vacuole. Predicted to be extrinsic component of membrane. Human ortholog(s) of this gene implicated in autosomal recessive spinocerebellar ataxia 4. Orthologous to human VPS13D (vacuolar protein sorting 13 homolog D).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_07071090_07114820.mRNA True 13378 mRNA 0.49 69 7071008 7114820

Neighbor

gene id symbol gene type direction distance location
CI01000001_06983345_06990659 RCC2 coding downstream 80349 6983085 ~ 6990659 (-)
CI01000001_06965170_06976281 RNF207B, RNF207 coding downstream 94727 6965071 ~ 6976281 (-)
CI01000001_06945753_06946316 NA coding downstream 124643 6945753 ~ 6946365 (-)
CI01000001_06932075_06937182 NA coding downstream 133777 6931621 ~ 6937231 (-)
CI01000001_06804031_06824280 NA coding downstream 246728 6802876 ~ 6824280 (-)
CI01000001_07121674_07129337 LRRC38A coding upstream 6854 7121674 ~ 7129337 (-)
CI01000001_07137510_07187079 EPHB2, EPHB2B coding upstream 22690 7137510 ~ 7187079 (-)
CI01000001_07270003_07290702 PHC2A coding upstream 154865 7269685 ~ 7290768 (-)
CI01000001_07311570_07321107 NA coding upstream 195841 7310661 ~ 7321370 (-)
CI01000001_07382559_07385351 NA coding upstream 267407 7382227 ~ 7385630 (-)
G17874 NA non-coding downstream 2616 7068180 ~ 7068392 (-)
G17794 NA non-coding downstream 71302 6995068 ~ 6999706 (-)
G17839 NA non-coding downstream 121635 6948630 ~ 6949373 (-)
G17838 NA non-coding downstream 130305 6938912 ~ 6940703 (-)
G17791 NA non-coding downstream 153381 6914459 ~ 6917627 (-)
G17904 NA non-coding upstream 132239 7247059 ~ 7248321 (-)
G17911 NA non-coding upstream 148649 7251311 ~ 7267952 (-)
G17922 NA non-coding upstream 221636 7336456 ~ 7338325 (-)
G17929 NA non-coding upstream 237264 7352084 ~ 7352631 (-)
G17941 NA non-coding upstream 280844 7395664 ~ 7399215 (-)
G17789 NA other downstream 180594 6837525 ~ 6890414 (-)
G16753 NA other downstream 455419 6583054 ~ 6615589 (-)
G16664 NA other downstream 723053 6344104 ~ 6347955 (-)
G16462 NA other downstream 1841423 5222777 ~ 5229585 (-)
G18023 NA other upstream 641681 7756501 ~ 7757520 (-)
G18223 NA other upstream 811284 7926104 ~ 7928517 (-)
CI01000001_09804494_09811219 NA other upstream 2694837 9804429 ~ 9811219 (-)
G20136 NA other upstream 3424207 10539027 ~ 10539850 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00002150 vps13d coding CM030136.1 CM030136.1 5128059 ~ 5196093 (+)