CI01000001_07137510_07187079 (EPHB2, EPHB2B)


Basic Information

Item Value
gene id CI01000001_07137510_07187079
gene name EPHB2, EPHB2B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 7137510 ~ 7187079 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_07137510_07187079.mRNA
TTAAAGTGGGAAGAGGTGAGCGGCTACGACGAAAACATGAACACCATCCGCACCTACCAAGTGTGCAATGTCTTCGACGCCAACCAGAACAACTGGGTGCGCACCAAATACATCCGGCGGCGGGGTGCCCAACGGATCCACGTGGAGATGAAGTTCTCCGTGCGAGACTGCAGCAGCATCCCGAATGTCCCTGGCTCTTGCAAGGAGACTTTTAATCTGTACTACTTCGAATCAGACTCTGATGTAGCCACCAAGGTGTATCCCGCCTGGATGGAAAACCCTTGGGTCAAGGTGGACACCATTGCGGCCGATGAGAGTTTCTCCCAGGTGGACCTGGGCGGCCGTGTGATGAAGATCAACACGGAAGTACGCAGCTTTGGGCCGGTGTCCCGTAATGGCTTCTACTTGGCCTTTCAGGATTATGGAGGCTGCATGTCGCTCATTGCCGTAAAGGTTTTCTATCGCAAATGTCCCCGAATTATTCGGAATGGGGCCATCTTTCAGGAGACCTTGTCAGGGGCGGAGAGCACCTCTCTGGTGTCTGCCCGAGGCACTTGTGTACCTAATGGAGAGGAAGTGGATGTACCCATTAAACTGTACTGCAATGGAGATGGGGAGTGGCTGGTACCTATCGGGCGTTGCGTGTGCAAGGCTGGGTATGAGTCTGTGGACAACGGAACTGTGTGTAAAGCCTGTCCGTCTGGGTCCTTTAAAGCCTCTCAAGGGGACCAGCAATGTCTCCAGTGTCCCATCAACAGCCGCACCTCCAACGAGGGTGCCACCAATTGTGTCTGTCGCAGTGGATACTACCGTACGGACTCTGACCCTCTACAGATGCCATGCACCACGGTTCCGTCTGCACCCCAGAGAGTGATTTCTAGCGTGAACGAGACCTCCCTGCGGCTGGAGTGGGATCCGCCGAAGGAGAGCGGAGGCCGGGAGGATGTGGTATACAACATCATCTGCAAGAGCTGCGGTTCGGGTCGAGGGGCCTGCACTCGCTGTGGTGACAACGTGCAGTTCGTGCCCCGCCAACTGGGCCTGACCGATCCACGGGTCCATATCAGTGACCTGCTGGCCCACACGCAGTACACTTTTGAGATCCAGGCTGTGAATGGAGTGTCTGACCAGAGTCCCTACTCGCCTCAGTTCACCGCTGTCAACATCACCACAAACCAGGCTGCTCCATCTGCTGTGTCAATCATGCATCAGGTCAGTCGAGCTGTGGACAGTATCACGTTGTCCTGGTCCCAGCCAGACCAGCCCAATGGAGTCATTCTGGACTACGAGCTGCAATATTATGAGAAGAATATGGCTGAGTCAAACTCCTCTCTGCTGCGGAGTCAGACTAATACAGCAGTTATCCGGGGCCTAAAGCAGGGGACCATCTACGTGTTCCAGGTACGGGCCCGAACAGTGGCGGGCTTTGGACGTTTCAGTGGGAAGATGTACTTCCAAACAATGACTGAAGAGGAGTATAACTCCAGCCTGCAAGAGAAACTGCCCCTCATTATTGGCTCTGCTGCTGCTGGTGTTGTTTTTCTCATCGCTGTGGTTGTGCTCATTATCGTCTGTAATCGGAGAGGCAGCGAAAGGACAGAGTCTGAATACACTGACAAGCTGCAGCATTACACCAGCGGCCACATGTCTCCAGGAATGAAGATCTACATTGATCCTTTCACATATGAGGATCCCAATGAGGCAGTGCGTGAGTTTGCCAAAGAAATAGACGTGACCTGTGTGAAAATCGAGCAAGTCATTGGTGCAGGTGAGTTTGGAGAGGTATGTAGTGGTAATCTCAGGCTTCCTGGAAAGAGGGAGATTCTGGTGGCCATCAAGACTCTGAAATCAGGCTACACTGAGAAGCAGCGGCGGGACTTCCTGAGCGAAGCCAGCATCATGGGGCAGTTCGACCATCCCAACATCATCCACCTGGAGGGAGTGGTGACCAAGAGTACTCCAGTAATGATCATCACTGAATTCATGGAGAACGGATCACTGGACTCCTTCCTTCGGCAAAATGATGGCCAGTTCACTGTCATTCAGTTGGTCGGCATGTTGCGTGGCATTGCAGCTGGCATGAAATACCTCTGTGACATGAACTACGTACATCGCGATCTGGCTGCCCGCAACATACTGGTCAACAGCAATTTAGTCTGCAAAGTATCTGACTTTGGGCTTTCTCGCTTTCTGGAAGATGACACGTCAGATCCTACATACACAAGTGCCCTGGGAGGGAAAATTCCAATACGATGGACTGCTCCCGAGGCCATTCAATATAGGAAGTTCACATCCTCGAGTGATGTGTGGAGCTATGGGATCGTAATGTGGGAAGTCATGTCCTATGGAGAGCGACCGTACTGGGACATGAGCAATCAAGATGTAATAAATGCAATCGAGCAGGATTATAGGTTACCTCCTCCTATGGACTGTCCAAATGCACTTCACCAACTAATGTTGGACTGCTGGCAGAAGGACAGAAACAACCGTCCGAAATTCAGTCAGATTGTCAACACTCTGGATAAGATGATACGTAATCCTGGCAGCCTGAAGGCCACCACCCCTCTCTCTTCAGGCGTACATCTACCTCTGCTGGACCGCAGCACACCAGACTTCTCCAGCTTCAGCACAGTGGATGAATGGCTGGACGCCATCAAAATGGGCCAGTACAAGGAGAACTTTGCCAATGAAGACCTCACTACCTTTGAAGCCGTGTCTCAAATGACTATGGATGATATTCTGAGGGTGGGAGTAACACTAGCCGGTCACCAGAAGAAGATTCTCAACAGTGTGCAGATGATGCGTGCCCAAATGAACCAGATACAGTCAGTGGAGGTT

Function

symbol description
ephb2b Predicted to enable transmembrane-ephrin receptor activity. Predicted to be involved in axonogenesis; positive regulation of kinase activity; and transmembrane receptor protein tyrosine kinase signaling pathway. Predicted to act upstream of or within protein phosphorylation. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be part of receptor complex. Predicted to be active in neuron projection. Predicted to be integral component of plasma membrane. Human ortholog(s) of this gene implicated in blood platelet disease. Orthologous to human EPHB2 (EPH receptor B2).
ephb2 Predicted to enable amyloid-beta binding activity and transmembrane-ephrin receptor activity. Involved in several processes, including positive regulation of B cell proliferation; positive regulation of gene expression; and regulation of blood coagulation. Located in nucleoplasm and plasma membrane. Implicated in blood platelet disease. Biomarker of cognitive disorder and human immunodeficiency virus infectious disease.

NR:

description
Ephrin type-B receptor 2, partial

GO:

id name namespace
GO:0016310 phosphorylation biological_process

KEGG:

id description
K05111 EPHB2, ERK, DRT; Eph receptor B2

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_07137510_07187079.mRNA True 2838 mRNA 0.52 14 7137510 7187079

Neighbor

gene id symbol gene type direction distance location
CI01000001_07121674_07129337 LRRC38A coding downstream 8173 7121674 ~ 7129337 (-)
CI01000001_07071090_07114820 VPS13D coding downstream 22690 7071008 ~ 7114820 (-)
CI01000001_06983345_06990659 RCC2 coding downstream 146851 6983085 ~ 6990659 (-)
CI01000001_06965170_06976281 RNF207B, RNF207 coding downstream 161229 6965071 ~ 6976281 (-)
CI01000001_06945753_06946316 NA coding downstream 191145 6945753 ~ 6946365 (-)
CI01000001_07270003_07290702 PHC2A coding upstream 82606 7269685 ~ 7290768 (-)
CI01000001_07311570_07321107 NA coding upstream 123582 7310661 ~ 7321370 (-)
CI01000001_07382559_07385351 NA coding upstream 195148 7382227 ~ 7385630 (-)
CI01000001_07399727_07402300 NA coding upstream 212566 7399645 ~ 7403682 (-)
CI01000001_07492000_07496973 SPSB1, SPSB4 coding upstream 304343 7491422 ~ 7496973 (-)
G17874 NA non-coding downstream 69118 7068180 ~ 7068392 (-)
G17794 NA non-coding downstream 137804 6995068 ~ 6999706 (-)
G17839 NA non-coding downstream 188137 6948630 ~ 6949373 (-)
G17838 NA non-coding downstream 196807 6938912 ~ 6940703 (-)
G17791 NA non-coding downstream 219883 6914459 ~ 6917627 (-)
G17904 NA non-coding upstream 59980 7247059 ~ 7248321 (-)
G17911 NA non-coding upstream 76390 7251311 ~ 7267952 (-)
G17922 NA non-coding upstream 149377 7336456 ~ 7338325 (-)
G17929 NA non-coding upstream 165005 7352084 ~ 7352631 (-)
G17941 NA non-coding upstream 208585 7395664 ~ 7399215 (-)
CI01000001_06932075_06937182 NA other downstream 200287 6931621 ~ 6937231 (-)
G17789 NA other downstream 247096 6837525 ~ 6890414 (-)
G16753 NA other downstream 521921 6583054 ~ 6615589 (-)
G16664 NA other downstream 789555 6344104 ~ 6347955 (-)
G16462 NA other downstream 1907925 5222777 ~ 5229585 (-)
G18023 NA other upstream 569422 7756501 ~ 7757520 (-)
G18223 NA other upstream 739025 7926104 ~ 7928517 (-)
CI01000001_09804494_09811219 NA other upstream 2622578 9804429 ~ 9811219 (-)
G20136 NA other upstream 3351948 10539027 ~ 10539850 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location