Gene
RNA
| Item | Value |
|---|---|
| gene id | G17904 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000001 |
| NCBI id | null |
| chromosome length | 13537560 |
| location | 7247059 ~ 7248321 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: active breakpoint cluster region-related protein isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU20100 | True | 222 | lncRNA | 0.40 | 2 | 7247059 | 7248321 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000001_07137510_07187079 | EPHB2, EPHB2B | coding | downstream | 59980 | 7137510 ~ 7187079 (-) |
| CI01000001_07121674_07129337 | LRRC38A | coding | downstream | 117722 | 7121674 ~ 7129337 (-) |
| CI01000001_07071090_07114820 | VPS13D | coding | downstream | 132239 | 7071008 ~ 7114820 (-) |
| CI01000001_06983345_06990659 | RCC2 | coding | downstream | 256400 | 6983085 ~ 6990659 (-) |
| CI01000001_06965170_06976281 | RNF207B, RNF207 | coding | downstream | 270778 | 6965071 ~ 6976281 (-) |
| CI01000001_07270003_07290702 | PHC2A | coding | upstream | 21364 | 7269685 ~ 7290768 (-) |
| CI01000001_07311570_07321107 | NA | coding | upstream | 62340 | 7310661 ~ 7321370 (-) |
| CI01000001_07382559_07385351 | NA | coding | upstream | 133906 | 7382227 ~ 7385630 (-) |
| CI01000001_07399727_07402300 | NA | coding | upstream | 151324 | 7399645 ~ 7403682 (-) |
| CI01000001_07492000_07496973 | SPSB1, SPSB4 | coding | upstream | 243101 | 7491422 ~ 7496973 (-) |
| G17874 | NA | non-coding | downstream | 178667 | 7068180 ~ 7068392 (-) |
| G17794 | NA | non-coding | downstream | 247353 | 6995068 ~ 6999706 (-) |
| G17839 | NA | non-coding | downstream | 297686 | 6948630 ~ 6949373 (-) |
| G17838 | NA | non-coding | downstream | 306356 | 6938912 ~ 6940703 (-) |
| G17791 | NA | non-coding | downstream | 329432 | 6914459 ~ 6917627 (-) |
| G17911 | NA | non-coding | upstream | 15148 | 7251311 ~ 7267952 (-) |
| G17922 | NA | non-coding | upstream | 88135 | 7336456 ~ 7338325 (-) |
| G17929 | NA | non-coding | upstream | 103763 | 7352084 ~ 7352631 (-) |
| G17941 | NA | non-coding | upstream | 147343 | 7395664 ~ 7399215 (-) |
| G17968 | NA | non-coding | upstream | 193996 | 7442317 ~ 7444112 (-) |
| CI01000001_06932075_06937182 | NA | other | downstream | 309836 | 6931621 ~ 6937231 (-) |
| G17789 | NA | other | downstream | 356645 | 6837525 ~ 6890414 (-) |
| G16753 | NA | other | downstream | 631470 | 6583054 ~ 6615589 (-) |
| G16664 | NA | other | downstream | 899104 | 6344104 ~ 6347955 (-) |
| G16462 | NA | other | downstream | 2017474 | 5222777 ~ 5229585 (-) |
| G18023 | NA | other | upstream | 508180 | 7756501 ~ 7757520 (-) |
| G18223 | NA | other | upstream | 677783 | 7926104 ~ 7928517 (-) |
| CI01000001_09804494_09811219 | NA | other | upstream | 2561336 | 9804429 ~ 9811219 (-) |
| G20136 | NA | other | upstream | 3290706 | 10539027 ~ 10539850 (-) |
