CI01000001_09113045_09130978


Basic Information

Item Value
gene id CI01000001_09113045_09130978
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 9113045 ~ 9131322 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_09113045_09130978.mRNA
TTTGCACAGGCACCAAGAATGCTCTGAGCTCTACTGGCACCCCTGCACAACACTACAACAACCTGAAGGAGCGCTACACCGGATGTGAGATCGTCATGGGCAATCTTGAGATCACACAGATGGAGAATGACCTCGATTTCTCATTTCTTGGAAGTATCCGAGAAGTCACAGGATACATCCTCATTGCTATGAACCAGTTCCGCAGGTTGCCTCTGGACCAGCTCAGAGTGATCCGTGGTAGCAGCCTGTATGAGAAGGAATGGGCCCTTTCTGTCTTCCATAACTTTGAGAGTCACAGTGGCCTGGAAGATCTGGGCCTCACCAACCTCACAGAGATCTTGGAAGGTGGGGTACAAATTGTCCAGAACAGGAACCTCAGTCATGCTCCATGGATCAACTGGCGGGACATTATCAGAGACAGTGATGCTCGCATCCAGATCCAGAACAATGGAGAAAGAGGGTCATGTGATTCTGCATGCGGAGAATTCTGCTGGGGTCCACATAAAGATCAGTGCCAGAAATTGACAAAAACAGTGTGTGCACCTCAGTGTCATGGCCACTGTTTTGGGACCAACCCTAATGAGTGCTGCCACACAGAGTGTGCTGGAGGCTGCATTGGACCAAAGGACACAGACTGCTTTGTGAGTACTAGCACTATTGCCATTATGCTCTCATTGCATTGCTCAAGATCTGTTACATCTATTGCATGTCGGCATGTCAATCACTCAGGCTCCTGTGTCCCTCACTGCCCTTGGCCTCTGGTGTATAACCGACAGACCTTTCAGCTGGAGCCCAACTCTGAAGCCATGTATCAGTTCGGTTCGATCTGCGTACTCAAATGTCCCGCACACTTTGTTGTGGATGGCAGCGCATGTGTGAGCAGTTGCCCTCCTGGTAAAACAGAAAAAGAGAAAAATGGCATTAAACAGTGTGAAACTTGCATTGGCCTGTGTCCCAAAGTATGTGAGGGAACGGGAGCCAATCATAGACAAACAGTGGACTCCAGTAACATAGACAGCTTTATCAACTGTACCAAAATCCAAGGGAGTCTACATTTTCTGATCTTGGGTATCAAAGGAGACGCCTATCATAACATACCACCTCTGGAGCCTGAAAAACTCAAAGTATTTAACACTGTCAGAGAAATTACTGGCACTTTGAACATTCAGTCTTGGCCCGATGAACTCAGCGATCTGTCTGTTTTCTCCAGTCTCACTACCATTCAGGGAAGATCTCTAAACAACCATAAGAGGTATGTACTCCCTGCAACCCGAAAACCAGTATTTCTGTATCGCCAACCCTCTCTCAATCACATGCACAAACATTGTCTTTTTCCTGCTGTGGGTGCCAAGCCGTTCTCATTGTTGGTGATGAAGATTCCCTCCCTTACATCTCTGGGACTGCATTCGTTGCGTGAGATCAGCGATGGCAGTGTATACATCACTCAAAATATAAACCTGTGTTTTTACTACACCGTCGACTGGATCCAGATCTTCACCGGTAACCGCCGGCAGCTCAGGCGTAGAAACAATGACATCAAGGAAAACAAACCCCAGATCAAGTGTGAGGAAGAGGGCCATGTGTGTGACCCCCTGTGCTCAGACGCAGGATGCTGGGGCCCGGGGCCTGAGCAGTGTTTGTCGTGCAGGAATCACAGTCGGCATGGCACCTGTGTATCTCACTGCAACCTCTACTCTGGAGAGCCAAGAGAGTTTGCAGCATCTAATGGAGAGTGCATTGCTTGTCACCCTGAGTGTCTACCCCAAAATGGGAATCAAACATGCAAAAAAGAAGGTGCTGATCAGTGTGTAGCATGTTTAAACCTGATGGATGGCCCTCACTGCGTTTCTGCTTGTCCTAATGGAGTGAATGGGGAAAAGGGTCAGACCATATTTAAATACCCTAATGCATCAGGTCATTGTGAGCTCTGTCACCTCAACTGCACAAGAGGATGCACAGGCCCTGCGCTCAGAAACTGTGTAGATCATGATAGACTTGTAAACAGCTCTCAGATCGCAGGTATAGCAGTTGCTATATTTACTGGTATCATCGTGCTCTTGGCACTGTTTGTGCTTGGTGTGCTGTATCACAGAGGCCTGGCGATTCGTCGCAAAAGAGCTCTGAGGAGGTATCTTGAGAGCGGTGAGAGCATGGAGCCACTGGATCCCGGAGAGAAGGGGACAAAAGTGCATGCTCGCATCCTAAAACCACAAGAGCTGCGAAAGGGCAAACTTCTGGGCTACGGAGTCTTTGGCACTGTGAATAAGGGTTTCTGGATCCCTGAAGGAGACTCTCTAAAAATCCCTGTGGCAATAAAGACCATCCAAGACCGCAGTGGCCGGCAGACCTTCACAGAAATTACTGATCACATGCTTGCAATGGGAAGCCTGGATCACCCGTATATAGTGCGTCTCCTTGGGATCTGTCCAGGGACAAGTTTGCAGCTGGTCACCCAGCTCAGTCCTCAGGGATCCTTACTGCAACACCTTCGCCAAAACAAAGACAGCCTGGACCCCCAGCGTCTGCTCAACTGGTGTGTGCAGATCGCAAAGGGCATGTATTATCTTGAGGAGCACTGCATAGCACACAGGAACCTTGCTGCACGCAACGTGCTGCTCAAGAGTGACTACATAGTACAGATCTCAGACTTTGGGGTTGCAGACCTGCTCTACCCAGATGATAAGAAATATGTGTACAGTGAACACAAGACGCCAATAAAATGGATGGCATTAGAGAGTATCCTCTTCAGAAGATACACTCATCAGAGTGATGTGTGGAGCTATGGTGTGACTGTATGGGAGATGATGTCATATGGAGCAGAGCCATATGCAGCCATGCATCCTCATGATGTGCCAGGTTTATTGGAAAAAGGAGAGCGGCTGGCTCAACCACAGATCTGCACCATAGATGTCTACATGGTCATGGTCAAGTGCTGGATGATTGATGAGAATGTAAGGCCTACATTTAAAGAACTGGCCAGTGAATTTACAAGAATGGCAAGGGATCCACCACGATACCTTGTGGTGAAACCTGCTCAGAATTGCACTGGTGCAGAGGAAAGCCACCAACGTGTTAAAGGCTCTCATTTAGTGGCAGACTTGGAGGAAGATGATGATGATGAGGTATTGCAGGATGGCTTTGCTACTCCTCCCCTCCAGCTGTCACCAACTAGAAGTCATTCTCGTCTTCGTATGGCCTCCTACAAGGGCACCTCAGAGCACACAACAACTATAGGTTATCTCCCTATGACCCCTGGCCCAGGGGACAACCCTAGACAGATGAGAGCCCAGAGGAGGAAGACTGGCTCAGTGAGGACAGAGTCAGAGTGCTCGGAGGGCAGGGGGACCCTGGGGGACATTGAAATGGCTGAACTTACTTCTCAAACAGGTAGTCTTCGCAGAGGTCGTAGCCGTATGGACAGCGCCTACATGTCCACCGGCGTGTCTGTGGCTTCAGATCCGTTCTCGCCAGGTCCGGAGGGCGTAGATGAGGACCATTATGGATATGTGCTGCCCACAGAGAAAGGTTCCAGAAGCACTTTTTCTCATAGTAGGATATCCAGTAACTCCAAGAGTGCTCACTCAACACCAAAAACAGACACCACACAAGAGTACGAACTAATGAACAAAGAGCCCCCTCGGCTTTCTACTTCACCTACAGACAGCACTGACGCTTCATCTGCATCTTCCCCTGCTTCTCCTTACACATGCAATATTTTACCACAGAAGAGAGACACTGACTCAACACAAACCGAACAGTCGGATAAGGCCACTAGTCCCCCTGAAGGAGACGGCTTGGAGTCTGCTGCTGCTTGTGAATACGGTCTGGTTGGAACAGTAACATGTACTGACAGGAGTCAGTCTGAGATCAGCGCTGTAGAAGAAGAGCAGCAGCCACAAAAAGTGGTGGTTGAGTATGAATACATGGACATACGTACAGACATACACCAGCAAAACGTAGCAGGGGGGAGCACATCGAGCAGTCCAGATGAGGTGGAGAATGGCGTAAAAGAAGCAATTTACCAAAATGTAAGTGAGCCGCCAAGGTTGACAGCAAGACATAAGGAAAATGAGGATTCTGATTGCAGTACACAGCGCAGTGAATATGTAGACATGGAGGCATCAGGGATAACTGGCTCTGAGGATGGAGATCAGGCTGATTATCAGAACATTCCAGTAAAGGGAAGGCCCATGGTGGGAGAGGAGTCACAAAAGCCTGGTCTCAGACCCTACATAAAAGTGTGTACTGGAGTAGAGGCGCAAAACACTTCATTTGACAACCCAGATTACTGGCACAGCAGATTATTCCACAAGCAAGATACTGTTTGTACATAATTATTGACTTAATCTCACTAACAGAAATGTGATGGATGAACGATGGAAACAGAATGGACTGGCACAACCAGCATGTTTCTAGGGATGTATGTCTACCATGTGTTCAGCATTTGAACACATGAATTTATGCTAATGTGCCAACAAAATATACTATATAATAGTATAAAATGTCTGGTCTTGTTGAAGATTGGCCTACCTCCACTTGTTTGTCTCTGAAGTCCTACTCCTGTGGTTTTGTATATACAATTATGTTTGTTTTTTATGATGATGATTTTTGGTTATTCAATGAGGAACAATTCTTTTTGGAAAAAAAACAGTTATTATATATTGATTTTTTTCAATGA

Function

NR:

description
erbB3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_09113045_09130978.mRNA True 4678 mRNA 0.48 28 9113045 9131322

Neighbor

gene id symbol gene type direction distance location
CI01000001_09059083_09101251 NA coding upstream 11693 9058864 ~ 9101352 (+)
CI01000001_09039724_09045754 NA coding upstream 66930 9039724 ~ 9046115 (+)
CI01000001_08971649_08984224 NA coding upstream 128806 8970545 ~ 8984239 (+)
CI01000001_08962231_08968219 CASP9 coding upstream 144818 8962231 ~ 8968227 (+)
CI01000001_08950041_08960737 NA coding upstream 151974 8950041 ~ 8961071 (+)
CI01000001_09132867_09145278 PA2G4.L, PA2G4-B, PA2G4B, PA2G4, PA2G4A coding downstream 1545 9132867 ~ 9145555 (+)
CI01000001_09147684_09162673 ESYT1A coding downstream 16362 9147684 ~ 9163215 (+)
CI01000001_09164619_09166621 NA coding downstream 33219 9164541 ~ 9166725 (+)
CI01000001_09186450_09203866 FMNL3 coding downstream 55011 9186333 ~ 9203866 (+)
CI01000001_09226223_09227218 NA coding downstream 94767 9226089 ~ 9227246 (+)
G17388 NA non-coding upstream 21660 9088542 ~ 9091385 (+)
G17385 NA non-coding upstream 84094 9028681 ~ 9028951 (+)
G17359 NA non-coding upstream 84526 9028111 ~ 9028519 (+)
G17495 NA non-coding upstream 101915 9010918 ~ 9011130 (+)
G17483 NA non-coding upstream 189301 8923496 ~ 8923744 (+)
G17507 NA non-coding downstream 12039 9143361 ~ 9143834 (+)
G17326 NA non-coding downstream 82134 9213456 ~ 9273959 (+)
CI01000001_09308544_09311741 NA non-coding downstream 133194 9306701 ~ 9312011 (+)
G17566 NA non-coding downstream 249813 9381135 ~ 9381660 (+)
G17234 NA other upstream 1080562 8032124 ~ 8032483 (+)
CI01000001_07531945_07539781 NA other upstream 1572459 7531541 ~ 7540586 (+)
G15995 NA other upstream 3398094 5711885 ~ 5714951 (+)
CI01000001_05279884_05287123 NA other upstream 3823089 5279837 ~ 5287698 (+)
G15794 NA other upstream 4048341 5061218 ~ 5064704 (+)
G17353 NA other downstream 84700 9216022 ~ 9228859 (+)
G17354 NA other downstream 103141 9234463 ~ 9240677 (+)
CI01000001_09435836_09436037 NA other downstream 287006 9435836 ~ 9436373 (+)
G18896 NA other downstream 1108578 10239900 ~ 10241492 (+)
G18873 NA other downstream 1125790 10223879 ~ 10260714 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location