CI01000001_09059083_09101251


Basic Information

Item Value
gene id CI01000001_09059083_09101251
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 9058864 ~ 9101352 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_09059083_09101251.mRNA
CTAAAAAAAACAAGCACCCTCTGATACTCCTGTGAACTCAAGGGAACGCGGAAGATAAGAGAGTAATTCTTGTCGCTGACAGCTGGCAACACTGGAAGGACGGCTGAGGAACTTCATAAGAGGGTGAGAGGGTGATCACTGAGTGAGAGAGACGGGGACTGACAGAGAGCCAGAGTGCAGGAGGGGGCGGCGGAGGAGGAGTGGGAAAGGTCAATCGCCATGGCGACGGACCCAGGAGAGCCCACTGCCACGGAGGAGTCCTCTGGAGAGAAACCTGATGGAGAGAGGGAGGAGGAGAATGACCAGGGGAACAGGGCTGCCCGTGAGAGAGAGAGGATGCACAGCACGCCGTCTGACTTCCCCTCCTCCCAGACACAGGAAAAGAGAGCATGGTGCGCAGGAGGAGGAGGAGGCGGAGTGGAGGACAGTAAAGAAATGGATGAACCGGTCAGACCTCTGACCTTCTTCATGCCCTCCTCCCCAGCAGCACAAGAACCGTGCAGGAAACGGGAGAACAAGCGTTTTTTCCGAAAGAGCGTGGAGATATGTGAAGAGGACGATGAGGTGGAAGAAACCCACGACGCCCCTCACAGCGCCCCTCACCTCGAGTTTTGTGCCTCTGACTCTGTTTTCACCAGCGGAGCCCAGCAGTTACCCGCCAGTGCCTCGGCTGCCTTGGGTGAGGATGGCACTCAAGGCACACAGGATCCTGATAAGACCGGCCTTTCGGCGGCCACTCTAAAGGGGAAGGAGAGAGATAGAGAACAGGAAGAAGAGGCTGAGATGAAGGCCGTCGCCACTTCGCCCGGTGGCCGTTTTCTAAAATTTGACATCGAACTTGGCAGGGGAGCGTTCAAAACTGTTTACAAAGGCTTAGACACGGAAACCTGGGTGGAAGTTGCCTGGTGTGAACTGCAGGATCGAAAGCTGACCAAGGCGGAGCAGCAGCGGTTTAAAGAGGAGGCTGAAATGCTGAAGGGTCTACAGCACCCCAACATTGTGCGTTTCTATGACTCCTGGGAGTCTGTTCTTAGAGGCAAGAAGTGCATCGTCCTAGTGACTGAGCTCATGACCTCGGGAACACTCAAAACGTACCTTAAGCGCTTTAAGGTGATGAAGCCCAAGGTTCTACGCAGCTGGTGCAGGCAAATCCTAAAGGGTCTTCAGTTCCTACATACACGTACGCCACCCATTGTGCACCGTGACCTCAAGTGTGACAATATCTTCATCACAGGCCCGACTGGATCAGTAAAGATTGGTGACCTGGGCCTTGCCACCCTTATGCGGACATCATTTGCCAAGAGTGTCATAGTGGCTAAAATCCTTCATTTGAATTTCAATAATTGTGAGATCAAGCTAGGAAAAGATGAACAACTGATTCAAGGCCTTCTTGATTGTTTAAAAGATTGCATGTGTTTTGCAGTTGAATCTGAGGGAAATGATTTGAACTCGTTTGGCCTTGTTCAAGGTACTCCGGAGTTCATGGCCCCAGAGATGTACGAGGAGCACTATGACGAGTCAGTAGATGTCTATGCCTTTGGCATGTGCATGCTAGAAATGGCTACATCAGAGTACCCATATTCAGAATGCCAAAATGCTGCACAGATCTACCGCAAAGTCACCAGTGGTATCAAGCCTGCCAGTTTTGACAAAGTAAATGACCCTGAGGTAAAAGAAATCATTGAGGGCTGTATTCGCCAAAACCGATTAGAGCGGCTCTCAGTGAAGGACCTTCTAAATCATGCCTTCTTTGCGGAGGATACCGGTGTGCGTGTGGAGCTTGCAGAGGAAGATACTGGCTGCAAAGACTGCTTGGCCCTGCGCATCTGGGTTGAAGAGCCAAAGAAACTCAAAGGCAAGCACAAGGACAATGAGGCCATCGAGTTCAGCTATGACCTGGAGAATGACAGTGCCGAAGAAGTTGCACTGGAGATGGTGAAGTCTGGCTTTTTCCACGAAAGTGATGCTAAGGTGGTGGGGAAGTCCATCAGAGACAGGGTGACTCTTATTAAGAAGTCCCGTGAACGGCGACAACAGCAACTCCTTCAGCAGCAACAACAACAAAGTCTTGATGAGCGCCGTGACTCCTCGGTCCTTACCTCCTCTTTTTCCTATGTCCATCCTTCCTGCACCACCTCCTCACAGGGCACAGGAGCTGCTGCAGCTTCTGCAGCTGCTGGGGTTCAGGGAGAGGCAGAGGAGCTGCCAGAAGTGGACCAACATGTCCAACAGCAAGGGACTGCATTGGGCTTCACAGAGGGTGAGAGTCTTCCTGCTGTCAGTGGACAAAGCCAAGCCTTTTCTGTACCCGAGTCAGGGAACCGTGCTCATGCTCAAACCAGTTACCCCACTGGCACATCTGGAGTGAAAGGAGCAGGGGTTATATCTCACCCCCAGCTGCTCGCTATTGGTCAGAGCGGAGGGGTTCCAAATGTGCCTGTTGGCCAGAATGGTGGGATGTCTGGCATTTCCATTGGCCAAAGTGGTGGTGGGGCTCCTAACATTCCTGTGGCACAGACTTTCATTCAACCAGTCACTATGGCATCACAGGTCCCATTAAGTGTGCCTCAACAATATTCTCAGCCCCTTCCACCATACTCAACAGATGTTACATCCTCGCAAATGTTACACTCCCGACCCGCTGATGCTTCCACTCCCCACAGTTCTCTTGTACAGTCGCAGTCATACATCCCCCCAATATCACCCCAGGCACCCATGACTGTCCTCACTTCCTCCATCCCAGCTGGAGAACCCATAGCATCAGCAGGCAACAACATGCCACCCATGCAGACCCAAACTAGTATTGCTCCTGTTCAACCTACTGATGTTTTGCCCAAGCAAGCTATTGTTCAGACGCAACAGCAGGTGATGTCAGAATTGCCCGCAACGTTGCAACTGAACATCCAGCAAGCAACACCACAAAAGCAGGCAAATATAATGCAGCAGCACCAGACTGTGTTGTTGCCACAGCAGACGGACCAGGTTCAACAAATGGCTGTTTTGTTACAACAGCCACAGAATATAGAACAACCCCAGGTGGTTCTGCAGGAACAGCCACCACATTCCAGTGCATCTCAGCAGCCATATATCCCATTGCCACAGCAGAAACAGCCAACAATAACCAATCCACAGCAAAGTGAGCTACAACAGCAGGTGTACATACAACAACCTCCAAGCAAACCCCAGCAGCAAGTTGTGATACAGCAGCAAGTTCAGCAACATCAGCTGTCCGTACAACAATCCTCAGTAGAACAATATCAACACCAGACTCAGCAACAACAGGCACAGCAAGTTTATGTGCAACAAATAGCCGAATCACAAGAGCAGAACATGATAAAAACCATAGTACAACAGCCACCGCAGCAGCATATAGAGCAACATGCAGCTCTGGTAGATCAGGCAAACCTAGGGAAAACACAGCCTCCAGAGATGGTCCAGCAGATTAGTCAAATGCAGCACTCTCAACAAATAATGTCCCCTCAACCTCATCTTTCTCAAAAACAGACTGAGCAGCAACAGGTCTTGATTCAGCAACAACAAGCCATCCTTCCCCAGGCATCACATAGACCTTCTCTGGTAGAGTTACAAGTTCCAACCCTGGTTCAGGCTGTACCAAAAATGGTTAGTGCTCAAATACCTAGTCAAGTTCCAGCCCCAGTACTCATCCAGCAACAGATACCACCTCAGATGTCGGCCCAACCTTCAGCGCAAGTACAAATCCAGAGTCAAGGGGACCCTGGAATTTATGGTCAGATTCCCCTGCAGACTCAAAGTCATCCTGCACCGCAGACAATGGGAGGCCATATTCAAGCAGGCCAGCTGCAAGTTCCACAACCAACCCAACAAATCACATCTCCAACACAAGTTCCTACACCACAACCTATTCATTCTTTTGTCCCAACTTCAACACAAATGGTCTCACAAGGGCAAACCCTTCCATCCCAAACTCAGTTGGTACCACCTCAAGCTGCAGCTTCTCTCCAGTGTCAAGTCGTGGTAGGGTCACCTGCGCCTCTTGTGCATCCTACAGTGCCGGCTGCTTCTACAATTATGCCCACACAATTTGCTCAAGCACCTGTCGGTCCGCAAACCATTCAGTCTGTTCAGCTAGACCTCACACAATCTGTAAAACAACAACAACAACAACAGCCGCCTCTGCAGCAATATCAGCAAGCAGTACTGTCTCCAGTGTCACATGCGCCTACCATCAATCCAATGGCCACTTCATCAATGCAGCGCTATTTACAACAGACAAACCAATCACAAATGCAGGCTTCTCAAGTCATCCAAGCTCAGCAACATCCAGTCAGTGTAGCATCGATGCAGGCGGTCTTGCAACCCATGCCTCCAGTGCAACCTCAGGCTACCCAACAGCATGAGCAGCAACTGCCTCAAGCCCACCATGTGCAGCAACAGCAACCGCTCCACCATCAGCATCAGGCCCAACCTGTGCAGCAGCTTCTCCCACCTAATGCTGTTTTAACACAAGATCTCCACCAACAACCTTGTCATCCTCAACCAGTGCTCCAACATATGCTCCCGATACACATTGCTCCCAGTCAGGTACCTCAGACCCAAGCAAGAACGGTACCTCTGTACAGTCAGGTGGTCTCAGGTCCACCACCCTCGCCCCAGAACCAGCAGAAACTTCCTGCTCAAATGCACACACAGACTAACATGCAGTCAAAAGCACACTCAACCGCACAGGCACAGACCCACATAGAGGCTACTGGGAGTTTCGAGCAGCCTCATTACTCCCAAGCTGCCTTTATGCCATCACAGATCCCCCCAAGTCCATCTCATACTTCCCTACAGCCCTCTTCTGCTCTCCCAGCCCTACAACCAGCTGTCCCAGTTTCAGAAATTCCTGTTCCATCAGAGGCACAGCTAAACCAGCCAAGGCCTGCTGACATGATCCCTGATTCCCATCCTACTGTCAATGCTTCACAGTCCCATGACTCTAATGGCTCTGTGTTGCCCACCACCTCGCTGGCAGAAAGTGATGCTGCATTGCTGGGCATTGCTCAGGAGAGCCCACATCAGTCTGCCAACAGGGGCTCTTCATCAGGCTCTGTTCCTGCCAATGGAGATGAGGCCCAATCGCTGTGGGCCAGTGGAAAACAAGATAAGGTCTCAGGCACAGGGGACAACATGGTAGAGTGTCAGTTGGAGACTCACAGCAACAAGATGGTCACATTCAAGTTTGACATTGAGGGAGATGCACCTGAAGACATTGCGGATTATATGGTGGAGGAGGATTTTGTCCTTGAGCCTGAGAAAGAGAAATTTGTTGAGGAGCTGAGAGCTATAGTGAAGAAAGCTCAAGGAATACTAAGCACTCAGTCACAGTCTGGGTCCTTGGAGCAACTCCATGTGAGCACCCCATCCAGTGCAACAGTGGATTCAGCCCCTCAGTCTTCCCCTGTGGGTCGCTGGAGATTCTTCATTAACCAAACCATTCGCCATCGTGACTCACACTCCAACCAGGGAGCTTCCACTTCCCCACCAATGGGAGAGAGCCGAGTTCCCAAGTCCATAGAAACGGAGAAAGCCCCTGCGTCCATGTCAGCCTCGGCCATTGCTGCCCAAAAAGATTTAACACCCTCTGCCTTGCCAACAGTAGAGCAAGTCCTCTCCTCTACCTTGACTGGAGGCTCAATCGCTGTCATGGCTTCCAGCACCTCTGCCGCTCCTTTCCATGCAGTCGCAGCCCTCACAGGCTCCAATGTGGACCAAGGAGATGCTGCAGCTAAAGTTGATGGTGAACAGCCCCTCTCTAACTTGTCTGCTTATGGGACCCCTCCAGCATCACTGGTGACCCACGCTGATCCATCACAACAGTTGCTAGCTCAAACCCAAATGGCACCCTCACAAACACCAGATATACTTCAACAGACCCAGACACTACAGTTAGCAATGGCCACCACCGAACAGGCTCAGCAACCACAGATTATGCCTCATCCAGTGCTCCAGGTCGCTCCACAGCCACCTACACTCCAGCCTAGCGAGTCAAAAGCACTATCACAGCCGATACCAAAGGAGACAGTCTCTTTGCAGGGAGGCCTTCCAGCTGCCCAAGTTCAGCAGGTCCCTCACCAACAAGTACCAGTTGATTCTCAACAGCCGGCAATGCAACAGACCGCATTCTTGCAGCAACACAGCCTTCAGCAAACAGCCAATGCTGAGCAGATCCAGCACCACACTGTAGAACAGTATGTGTCTCAAGAAACCACACCGGCCCCAGCGATGCTGACCATGCATCCACAGCATTGCTTCCAGACCCAGGATCCCCTACAGCTTCGAGCTCCATTTCAGCCTGTAATCCCGCAGCAGCTTCCCGCCGAGCAAACGCAGACATTACTTCAGCAGGTACCGCATGATATGGTGCCTATGGCACAAACTGCGGTGCCTCCGGCTGTGCAGAAGCAGGCATCTGTCCAGCAGTCAGAGTCTGAGCTGTCCACTGGTGAGGACACCGTCAGCCACTCCGCCCCACCCCATCCCTCTTCGGACACCTCTCTCCCACCCCTCCAACTCTCTGAAACTGCTCTGCCCACCCTCTCCCATACATTCACACCCTCTCCAGCCCAGCCCTCCTCAGTTGCCGAGTCAGACAGCGAAGGCCCACCCAAAATCGAGTTTGTGGACAACCGAATCAAGACTTTGGATGAGAAACTGAGGACTCTGCTGTATCAGGAGCACAGCGGCAGCGGGGCAGCACTGGCAAGTGGCTCCACGGGCGGCCCTGGTCCTGCCCTCAACTCCACCTCGGGATCTGCTGCGGCCTCCACTGCAGTTGATGAGTCTTCAGAGCCCCCCTACGCATTCTCCCCACCTCCTGTGACCTCCTCAGACACCTCCCCTCACTCCACCTCTTCCACTACCTCCTCCACCACCCCTCGTTCTTCCTCCATCTCTCCGGATGGAGAGCGGGAGAGAGCAGGCGAGGAGGAGACGATCTCATCTGCTGTGCAACAACAGCCTGCCTCATCTTTCTCCTCTACATCCCCTCCATGCTCCCTCCTTTCCCCTCCACAGGAGCCCGGATCTCCAAAAGTGCCCAGTGAAACATCAGTAAGCGCTCCGCCTTCCCTCTCTGAAAGCTGCACCCCTGGAGATGTTCTGTTGCCTTCCTCTTCTCAAACGCCCATCCCACTGTGGCCTGGACAGCAGCAGCAGCACAATGAAGGAGGTGGATATTTTGGCCTAAACCTGACATGTCCTAGTATCAGAAATCCTGTTAGCAAGAAATCCTGGACTCGAAAATTCAAAAGCTGGGCGTGCAAACTGCGCCACTCCGCCAGCTTGTTCAAGAAGCCCAGAGTCCAGCAAGATGGCAACTTCAGCCAGGGGATGGAGGAGGAGAGGGAGGCATCTAAACACGACCAACCCTGCTCGCGCAGAGGGCGTTTCCAGGTGATTCCAGTTTCCCAGTCCGCAGAGCCCCTTCCACCACAGGAAGCTGCACCAAGCCAAGCAGCCATGCAAAGAAAAGTTGGCCGTTTCTCAGTTACACAGGCCGAACAAAGAGAGGAAAATTTGACGGACAGCTCCCCTGTGTCCCCTGACCTGGAGCGAGAGAGGAGGAAAACGAAAGCGAAAGATGGTGAGAAAGAGGAGAGGAGAACTACAGTACCCACCCACCCACCGAGGAGTCACACACGCTCGCCCCTGGGCAGCAGCGACGATGAGAGCGAGGTGGAGGATGAAGATTTGAGGAGAGAGCTCCACAAGCTGAGAGAGAAACACATCAAAGAGGTGGTGTCCCTGCAGGCACAGCAGAACAGAGAGCTGCAGGATTTGTACAGGCAGCTCCGCTCTCTTAAAGACCACAGACATCCTCTGTCCATGACCCTGCCCCGTACCTCTCCTTTGCCCGCCGCACCCCTCGCCATCTCCCCACGCAGACCCCGACCCGCCAAAGCCAAGCTTCGGCCCCGACCCCATTCTCACATGGATAACAACGGAGTCACACACCAAGACCAGAGTCCTTCAGCCCAGGGTTCTGCCAATAGAAAGAGCACATTCACAGATGAACTGCATAAGCTTGTTGATGAGTGGTCAAAAGAAGCTGTTTGCCCTGTTCAGCCTAAGCCTTCACTGAATCAAATCAAACAGATCCAACAAGTGCAGGAGTTGGGCGGATGGGGCCAGACTACTGAGCCAACAGCTTCATCGGGTTGGTTTTCCGGGGGTCCATTGAGTACTCCCGTATCAGTCAACATGTCTACAATGACGTCCACCCCCTATAGCACCATCGGTGGGCAAACGCAGCCGCCTCCAACGCAATTTCCCATAGCTCCTCTACCCCAGCAGAATGCACATCTGCAGCCTCCCCTGCACCGTCAGCCCCTGCAGTACAGCCCCTCTCCCCTGCACCCGCAGCAGCGCATCAGCAAAACACTGGCAAAAAGATGTAATCCTCATTGAATCTGGCATTTCATCAGATATAGACATACATAACTGCCAAGCAAATTTATGACTGGAAGAACATAGGTTGCCTTTTTACAGTGTATTTTTCTACACTGATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_09059083_09101251.mRNA True 8531 mRNA 0.52 26 9058864 9101352

Neighbor

gene id symbol gene type direction distance location
CI01000001_09039724_09045754 NA coding upstream 12749 9039724 ~ 9046115 (+)
CI01000001_08971649_08984224 NA coding upstream 74625 8970545 ~ 8984239 (+)
CI01000001_08962231_08968219 CASP9 coding upstream 90637 8962231 ~ 8968227 (+)
CI01000001_08950041_08960737 NA coding upstream 97793 8950041 ~ 8961071 (+)
CI01000001_08934325_08940532 KLHL21 coding upstream 117510 8934007 ~ 8941354 (+)
CI01000001_09113045_09130978 NA coding downstream 11693 9113045 ~ 9131322 (+)
CI01000001_09132867_09145278 PA2G4.L, PA2G4-B, PA2G4B, PA2G4, PA2G4A coding downstream 31515 9132867 ~ 9145555 (+)
CI01000001_09147684_09162673 ESYT1A coding downstream 46332 9147684 ~ 9163215 (+)
CI01000001_09164619_09166621 NA coding downstream 63189 9164541 ~ 9166725 (+)
CI01000001_09186450_09203866 FMNL3 coding downstream 84981 9186333 ~ 9203866 (+)
G17385 NA non-coding upstream 29913 9028681 ~ 9028951 (+)
G17359 NA non-coding upstream 30345 9028111 ~ 9028519 (+)
G17495 NA non-coding upstream 47734 9010918 ~ 9011130 (+)
G17483 NA non-coding upstream 135120 8923496 ~ 8923744 (+)
G17479 NA non-coding upstream 139164 8919493 ~ 8919700 (+)
G17507 NA non-coding downstream 42009 9143361 ~ 9143834 (+)
G17326 NA non-coding downstream 112104 9213456 ~ 9273959 (+)
CI01000001_09308544_09311741 NA non-coding downstream 163164 9306701 ~ 9312011 (+)
G17566 NA non-coding downstream 279783 9381135 ~ 9381660 (+)
G17234 NA other upstream 1026381 8032124 ~ 8032483 (+)
CI01000001_07531945_07539781 NA other upstream 1518278 7531541 ~ 7540586 (+)
G15995 NA other upstream 3343913 5711885 ~ 5714951 (+)
CI01000001_05279884_05287123 NA other upstream 3768908 5279837 ~ 5287698 (+)
G15794 NA other upstream 3994160 5061218 ~ 5064704 (+)
G17353 NA other downstream 114670 9216022 ~ 9228859 (+)
G17354 NA other downstream 133111 9234463 ~ 9240677 (+)
CI01000001_09435836_09436037 NA other downstream 316976 9435836 ~ 9436373 (+)
G18896 NA other downstream 1138548 10239900 ~ 10241492 (+)
G18873 NA other downstream 1155760 10223879 ~ 10260714 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location