c20h8orf82 (LOC107669429,LOC107728113,LOC107704038,LOC107567028,LOC107739166)


Basic Information

Item Value
gene id c20h8orf82
gene name LOC107669429,LOC107728113,LOC107704038,LOC107567028,LOC107739166
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 24865459 ~ 24867178 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220236.1
CGTTGGAcctacaaaacaaacacaacaaatttTTACCGccatgcatttatattacagTGAGGCTCTGCTGTAATCGAAGCAGCTATGAGGTTTGTTAATAGGCTGTTCTGTAATGAATGGAGGGGGCTGTTGAGCAGGGACGTGTCCTCATACACACAGGGACAGAGTCCAGTGGCCAAAATCAGAGAGTATTTCTACTACATCGACCATCAAGGACAGctGTTTCTGGATGACACCAAGGTGAAGAACTTTGTCACCTGTTTCAAAGACCAGCACTTCTTAGTGTTCTTCTTCAGCCGTCTGAAGGTCAACCAGAGCGGCCGATATGAACAGGACTtccccttcctctctctctgcggCCGCGAGCATAACTTCCTGCGCTGCGAAGACCGGCCAGTTGTTTTCACGCACCTGTTGTCGGAGGCGGGGCAAGAGGAGCGTCTGTCGTACTGTGGAGGCGGGGCCAAACTGACCACCCCGTTCCGCCCAGAATCTCTCTTCATGCACCCGGTCAGCGGCAGAGTGTACCATCCCGGACCGGAGCGAGGGGGAGGCGTGGGATTGGTCCGGTCAGCGATGGCCATCGAGCTGAGCGCGCACTTTGAGTACGCCATGGGTCAGGAGAGCGCGGGACCGCCCACTCATTTCATGTGGGCGGGTCATCGACACACTCTGACCAATGAGCTGGCCAAACATTTTCCTGTTCGAACAGACGAATGTGTGACGCTGCAGTGATTCGATCGACCGACAGATAgaagtgtatttatgtataatgtatattctGAACGCactgctgaaataaatgtatatattgggTCTTATA

Function

NR:

description
PREDICTED: UPF0598 protein C8orf82 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220236.1 True 823 mRNA 0.52 3 24865459 24867178

Neighbor

gene id symbol gene type direction distance location
naprt naprt,LOC107704039,LOC107669423 coding downstream 3619 24852469 ~ 24861840 (-)
hlx1 hlx,hlx1,LOC107704027,LOC107567024,LOC107739182,LOC107728099 coding downstream 32469 24829849 ~ 24832990 (-)
mia3 mia3,LOC107739181,LOC107568205 coding downstream 144353 24699172 ~ 24721106 (-)
brox brox,LOC107710643,LOC107732498,LOC107704042,LOC107568230 coding downstream 174370 24682627 ~ 24691089 (-)
LOC122324924 LOC107704029 coding downstream 182985 24678486 ~ 24682474 (-)
tbc1d7 tbc1d7,LOC108443239,LOC108260306 coding upstream 209310 25076488 ~ 25085331 (-)
wu:fi04e12 LOC107739175,LOC107672942,LOC107567016,LOC107661358,LOC107728115 coding upstream 218992 25086170 ~ 25102714 (-)
LOC122325515 LOC107739175,LOC107661358,LOC107728115,LOC107672942,LOC107567016 coding upstream 237060 25104238 ~ 25116679 (-)
psmg4 LOC107671085,LOC107661364,LOC107739191,LOC107728114,LOC107572584 coding upstream 280964 25148142 ~ 25150522 (-)
bphl bphl coding upstream 284034 25151212 ~ 25153120 (-)
G141684 NA non-coding downstream 44033 24821200 ~ 24821426 (-)
G141683 NA non-coding downstream 52303 24812825 ~ 24813156 (-)
G141682 NA non-coding downstream 66826 24794855 ~ 24798633 (-)
G141679 NA non-coding downstream 76555 24788672 ~ 24788904 (-)
G141676 NA non-coding downstream 88596 24776615 ~ 24776863 (-)
G141889 NA non-coding upstream 10570 24877748 ~ 24916483 (-)
G141899 NA non-coding upstream 69493 24936671 ~ 24947770 (-)
G141908 NA non-coding upstream 94076 24961254 ~ 24965553 (-)
G141911 NA non-coding upstream 151516 25018694 ~ 25022931 (-)
G141931 NA non-coding upstream 172514 25039692 ~ 25042258 (-)
rhpn1 rhpn1,LOC107704026,LOC107669421 other downstream 13680 24838652 ~ 24851779 (-)
G141651 NA other downstream 218038 24571413 ~ 24647421 (-)
slc35b2 slc35b2,LOC107704052,LOC107568229,LOC107559116,LOC107669435 other downstream 333096 24524069 ~ 24532363 (-)
LOC122324315 rbm25,rbm25b,hsp90ab1,LOC107704053,LOC107669447,LOC107732485,LOC107732486,LOC107568216,LOC107704054 other downstream 347716 24254393 ~ 24517743 (-)
G141502 NA other downstream 858794 24004687 ~ 24006665 (-)
mettl24 LOC107738893 other upstream 427666 25294844 ~ 25408775 (-)
wasf1 wasf1,LOC107661360,LOC107556997,LOC107564591,LOC107739187,LOC107667835 other upstream 459330 25326508 ~ 25377416 (-)
G142058 NA other upstream 781314 25648492 ~ 25650093 (-)
LOC122324601 slc25a29,LOC107678310,LOC107557018,LOC107728117,LOC107564594,LOC106608124 other upstream 880489 25747667 ~ 25754008 (-)
LOC122324466 samd15 other upstream 1183651 26050829 ~ 26054469 (-)

Expression


Co-expression Network