LOC122325515 (LOC107739175,LOC107661358,LOC107728115,LOC107672942,LOC107567016)


Basic Information

Item Value
gene id LOC122325515
gene name LOC107739175,LOC107661358,LOC107728115,LOC107672942,LOC107567016
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 25104238 ~ 25116679 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220552.1
GGGCGGGCTCGGTGGGCGCGGCTTCAGCCCCGAGCCGCGGAGGAGGAACGGGACGCGACCGCCGGATCGACCCGAGCTCGGCTCCGCGTCGCACCTCCGCCGTCTCTCGCAGTCATGAGCATGTACGGCTCGCAGCGCGCCCTCAACACGATGGGACGGCGCGCCGGATCGCGCGGCGAGCTCAACGCGTACGCGCGCGGCAGCAACGGCTTCACGCAGGAGTTCGTGGAGGGTTACGGCTTCTCCAGAGGCTCGATGAGCGCAGGACAAGTcCCCAGCATGACGCCTGTTCAGCAGCAGATAATGTTTCTACAGACTCAGTGTCAGGATTACCTGGACAAAGCAGCGCTGATACTGAAGTCTggTGGAGATGCCAATGCTTTTATTGAAGCTCAGAGCTGTCTGGCATCTGCTGCAGAAATCACTGACCAGCTCCGAGGCTACGCTATGGACCTGAACCAACAGAACCTGTCGTCTGAGAGCGTGGTGAGGAGCGTGAGCATATTCTCGGATCAGATCAGGGAGCTCAGCCTGGCTCTGAACGGTCCTCCGCCGCAGCAGAAGTGGAGCAGCCGGTCGATGCGGCGCAGCGTGAGCCGCGAGGAACACAGCCGCTTCTTCACCGAGGCCATGTCCTGGATCCTTCAGCAGAGGagGCTGATAGAGACGTCGTTGTGGGGCGATGATTTGACGGCCATCGAGCAGCAGATAGCCAATCACAGCGCGTTTCACAGCTCCATCCAGAGAAGTGGGGAGGTGGATCGAGCACGAGCAGAGCTGCTGCGAAGCAAAGACCAAAACGCCGAACTGACCAAATCCTGCCTCAACAAGCTGGATCAAGAATGGGACAGTCTGCTGAAAGTGTCGTACCAGCGGAGCGTCCAGCTGCAGGACCTGAGGAGCATCATCGAGGAGATCTCGGCGCAGATCATGTGGGTGAACGACCGCGAGGAGGAGGAGCTGGTGTTCGACTGGGGAGACAAAAACATCGACGCCTACATCCCTCAGAAACAGGAGAGCTTCTCGAAGCTGATGAGCGAGCTGGAGCAGAAGGAGGTTCAGCTGAACGTGCTCAAGACGAAGGTGGACGGCCTGCTGAGGAACAAACACCCGGCGTCTGATAAGATCCAGGCTTACATGGAGACGCTGCAGACTCAGTGGAGCTGGCTCCTGCAGATCACCAAATGCATCAACGTCCATCTGAAGGAGAATGCACGATACAGCCAGTTCTTCAAGGAGACGAGTGAAATGAACAGCAAACTGCAGAAAGAGCACGACAGCATCCGCAAGAGCTTCTCCTGCGATAAGTCCACGGCTCTTCACAACCTCCTGGAGCTCCTGCATGTCTGA

Function

NR:

description
PREDICTED: desmoplakin-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220552.1 True 1350 mRNA 0.59 10 25104238 25116679

Neighbor

gene id symbol gene type direction distance location
wu:fi04e12 LOC107739175,LOC107672942,LOC107567016,LOC107661358,LOC107728115 coding downstream 1524 25086170 ~ 25102714 (-)
tbc1d7 tbc1d7,LOC108443239,LOC108260306 coding downstream 18907 25076488 ~ 25085331 (-)
c20h8orf82 LOC107669429,LOC107728113,LOC107704038,LOC107567028,LOC107739166 coding downstream 237060 24865459 ~ 24867178 (-)
naprt naprt,LOC107704039,LOC107669423 coding downstream 242398 24852469 ~ 24861840 (-)
hlx1 hlx,hlx1,LOC107704027,LOC107567024,LOC107739182,LOC107728099 coding downstream 271248 24829849 ~ 24832990 (-)
psmg4 LOC107671085,LOC107661364,LOC107739191,LOC107728114,LOC107572584 coding upstream 31463 25148142 ~ 25150522 (-)
bphl bphl coding upstream 34533 25151212 ~ 25153120 (-)
LOC122325043 LOC107671087,LOC107728123,LOC107661362,LOC107556999 coding upstream 52439 25169118 ~ 25189520 (-)
ctsbb ctsbb,LOC107557005,LOC107661356 coding upstream 73880 25190559 ~ 25198931 (-)
fdft1 fdft1,LOC107661354,LOC107671088 coding upstream 85562 25202241 ~ 25211596 (-)
G141920 phactr1,LOC107739173,LOC107655832,LOC107557022 non-coding downstream 44317 25054807 ~ 25059921 (-)
G141936 NA non-coding downstream 52331 25046771 ~ 25051907 (-)
G141931 NA non-coding downstream 61980 25039692 ~ 25042258 (-)
G141911 NA non-coding downstream 81307 25018694 ~ 25022931 (-)
G141908 NA non-coding downstream 138685 24961254 ~ 24965553 (-)
G141951 NA non-coding upstream 48559 25165238 ~ 25168599 (-)
G141966 NA non-coding upstream 101850 25218529 ~ 25305703 (-)
G141972 NA non-coding upstream 160465 25277144 ~ 25325809 (-)
G141974 NA non-coding upstream 163048 25279727 ~ 25335044 (-)
G141979 NA non-coding upstream 176623 25293302 ~ 25294448 (-)
rhpn1 rhpn1,LOC107704026,LOC107669421 other downstream 252459 24838652 ~ 24851779 (-)
G141651 NA other downstream 456817 24571413 ~ 24647421 (-)
slc35b2 slc35b2,LOC107704052,LOC107568229,LOC107559116,LOC107669435 other downstream 571875 24524069 ~ 24532363 (-)
LOC122324315 rbm25,rbm25b,hsp90ab1,LOC107704053,LOC107669447,LOC107732485,LOC107732486,LOC107568216,LOC107704054 other downstream 586495 24254393 ~ 24517743 (-)
G141502 NA other downstream 1097573 24004687 ~ 24006665 (-)
mettl24 LOC107738893 other upstream 178165 25294844 ~ 25408775 (-)
wasf1 wasf1,LOC107661360,LOC107556997,LOC107564591,LOC107739187,LOC107667835 other upstream 209829 25326508 ~ 25377416 (-)
G142058 NA other upstream 531813 25648492 ~ 25650093 (-)
LOC122324601 slc25a29,LOC107678310,LOC107557018,LOC107728117,LOC107564594,LOC106608124 other upstream 630988 25747667 ~ 25754008 (-)
LOC122324466 samd15 other upstream 934150 26050829 ~ 26054469 (-)

Expression


Co-expression Network