LOC122326006 (LOC107655719)


Basic Information

Item Value
gene id LOC122326006
gene name LOC107655719
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 12403267 ~ 12404193 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220679.1
ATGGACAACCAGACCTTCTCAAACAATATAATCCTTGTGGAGGGACTGAAAGTTACACCTCAGTCCTCCTATACTATCTTCATCCTGCTTCTCGTgacttatgtttttataatgggATGTAACATTGGACTTGTAATTGTGATCTCAACTGAGAAGAATCTGCAACACCCTATGCATTTTCTGTTCTGTAACTTGCCACTAAATGATATACTAGGGGCCACTGTCATTGTGCCACGCTTACTTCAGGACATTTTAAAGGAAACCACAATGCACTACATGACATATGTGGAGTGTGTTGTTCAAGCATATTTTGTACATGTATTTGCAGCAGCAAGTCACTACGTGCTGATGATAGGACTCACCTTACGCCTGTCTCGCTGCAAATATAAAATTGAAAGCCCTTTCTGTGATAACGCCTCACTGTTTAAACTGTCCTGTGAAGACAGTGTGGCAGTTAATAATGTGTATGGGTTAATTACTTCTGTGGTTGTCTATATTTTCTCAATTGGGTCTGTAGTCATTACATATGGCAAAATTGCTGCAGCATGCATAACCAGCAAAAacaaagcacttaacagtaaAGCTATAAAAACCTGTGGCACACACATTGctgtttatataattatgtgTCTTTCTGGTGCCATCATGGTTTTTTTCCATCGTTCTCctgaatattctgaaaatagAAAACTGGCTAGTGTAATGTTCCATATTGTACCACCGGGACTAAATCCTTTAGTTTATGGTTTACAAACCAAAGAGATAAGGCGAAAGACTTTTAAACGTTGCTGTAGCTAA

Function

NR:

description
PREDICTED: olfactory receptor 52N5-like

GO:

id name namespace
GO:0007165 signal transduction biological_process
GO:0016020 membrane cellular_component
GO:0004888 transmembrane signaling receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220679.1 True 798 mRNA 0.39 2 12403267 12404193

Neighbor

gene id symbol gene type direction distance location
LOC122326751 or115-5,LOC107655716 coding downstream 15379 12385524 ~ 12387888 (-)
LOC122326760 si:ch211-218m3.18,or115-2,or115-6,LOC107739910,LOC107655715 coding downstream 34921 12364976 ~ 12368346 (-)
LOC122326762 si:ch211-218m3.18,or115-2,or115-7,si:ch211-218m3.9,LOC107739910 coding downstream 44963 12357366 ~ 12358304 (-)
LOC122326761 or115-7,LOC107739910 coding downstream 58065 12344261 ~ 12345202 (-)
ssh2b LOC107721401,LOC107689202,LOC107728952,LOC107685475,LOC107588757 coding downstream 97016 12281617 ~ 12306251 (-)
LOC122326168 NA coding upstream 9775 12413968 ~ 12417703 (-)
LOC122326169 si:ch211-218m3.9,LOC107739906,LOC107590130,LOC107655725 coding upstream 14761 12418954 ~ 12422124 (-)
LOC122326246 or115-5,LOC107655716 coding upstream 20988 12425181 ~ 12427422 (-)
LOC122326765 or115-9,or115-7,LOC107590109,LOC107655718,LOC107739909 coding upstream 89891 12494084 ~ 12495022 (-)
LOC122326756 or115-7,si:ch211-218m3.13,or115-9,LOC108180809 coding upstream 98336 12502529 ~ 12503467 (-)
G145879 NA non-coding downstream 85005 12244159 ~ 12318262 (-)
G145905 NA non-coding downstream 86273 12316295 ~ 12316994 (-)
LOC122326242 NA non-coding downstream 90123 12311922 ~ 12313144 (-)
LOC122327024 NA non-coding downstream 90395 12312799 ~ 12312872 (-)
LOC122327023 NA non-coding downstream 90619 12312575 ~ 12312648 (-)
G145911 NA non-coding upstream 3440 12407633 ~ 12408094 (-)
G145913 NA non-coding upstream 6974 12411167 ~ 12411433 (-)
G145922 NA non-coding upstream 13964 12418157 ~ 12418504 (-)
G145940 NA non-coding upstream 47907 12452100 ~ 12452655 (-)
LOC122326778 NA non-coding upstream 51815 12456008 ~ 12458270 (-)
G145910 NA other downstream 27722 12374846 ~ 12375545 (-)
LOC122326615 LOC101885612 other downstream 241600 12158672 ~ 12161667 (-)
rgs14b LOC107721394,LOC107590127,LOC107689186,LOC107748103,LOC107588771 other downstream 345660 12012211 ~ 12057607 (-)
cnot6a cnot6a,LOC107756798,LOC107689185,LOC107590062,LOC107566218,LOC107749911,LOC108441023,LOC107667594 other downstream 418195 11972216 ~ 11985072 (-)
LOC122326065 clk4b,LOC107673840,LOC107756806,LOC107667599,LOC107570696,LOC107749918 other downstream 590684 11806824 ~ 11812583 (-)
LOC122326748 LOC107739910 other upstream 78020 12482213 ~ 12483164 (-)
G146159 NA other upstream 678931 13083124 ~ 13083494 (-)
LOC122326016 NA other upstream 695923 13100116 ~ 13101521 (-)
LOC122326201 cox7b,LOC107713147,LOC107582003,LOC107675192,LOC107697350,LOC107726769,LOC107598778 other upstream 1462222 13866415 ~ 13867643 (-)
LOC122326208 NA other upstream 1728061 14132254 ~ 14139158 (-)

Expression


Co-expression Network