LOC122326011


Basic Information

Item Value
gene id LOC122326011
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 12559957 ~ 12564530 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220684.1
atggaGAACCTTACATACAACAGCATTGTTTTGCAATTAGAAGGTCTGAAGGGGTCAGAGCAGGCCATGTATCCTGTTTTTACATTCTTCCTGCTTTTCTATGTGATAATTATGGTGTCCAACATTGGAATATTCATTCTCATAACATCACACAAAAGCCTACATGAACCAATGTACATACTCTTCTGTAACTTGCCACTGAATGACATTCTTGGCAATTCCATCATGGTTCCTCGACTGCTCATGGACATTCTAAAGCCAGCGTCTGAGCGCTATATCAGTTACGTTGAGTGTGTTGTTCAAGCGTTTTCTACGCACACATATGGCACAACCTCCCATACTATACTAATGATAGGCCTTACTCTGAGGCTTAACCGTTGCAGGACTTTCATATCAAATCCTTTTTGTGATAATGCATCTTTGTTTAAGTTATCTTGTGAGGATGTGACTGTCAATAACTTGTATGGGCTGATATACACAGTACTGCTGTTTGGTTCTTCTATGGGAAGTATAGCAGtcacatacattaaaataaccacTGTTTGCTTAATAACTAAGAGTAAAACTTTGAACAGCCGTGCACTGAAAACCTGTAGCACTCACTTGACTCTCTATTTGATTATGCTCATCAGTGGGTTTATTGTTATAGTGCTACACCGCTTTCCTGTCTATTCAGATTACAGGAAACTTGCATCTCTGCTGTTTCATATCATTCCAAGTATTTTAAATCCAATCATTTATGGGCTGCAGTGCTCTGAGATTAGAAACATCCTGATACAGGATCCTAGCAGCCCCTGTGCTCACCATCGGGTGCTCGCCAcaggtctgccggtctccatcgccaccgtgggtggaggatccctcacCTCACCATCCCGCCTCTGA

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007608 sensory perception of smell biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0004984 olfactory receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220684.1 True 885 mRNA 0.42 3 12559957 12564530

Neighbor

gene id symbol gene type direction distance location
LOC122326747 LOC107709744,LOC107574620 coding downstream 2439 12556580 ~ 12557518 (-)
LOC122326755 or115-12,LOC107590131,LOC107757195 coding downstream 16066 12542953 ~ 12543891 (-)
LOC122326756 or115-7,si:ch211-218m3.13,or115-9,LOC108180809 coding downstream 56490 12502529 ~ 12503467 (-)
LOC122326765 or115-9,or115-7,LOC107590109,LOC107655718,LOC107739909 coding downstream 64935 12494084 ~ 12495022 (-)
LOC122326246 or115-5,LOC107655716 coding downstream 132535 12425181 ~ 12427422 (-)
serpinf1 serpinf1,LOC107718059 coding upstream 68409 12632939 ~ 12638547 (-)
serpinf2a serpinf2a,LOC107718058,LOC107699948,LOC107599232,LOC107723708,LOC107684202,LOC107588752 coding upstream 74165 12638695 ~ 12642836 (-)
slc47a1 slc47a1,LOC107699950,LOC107718054,LOC107571469 coding upstream 177825 12742355 ~ 12762710 (-)
plrdgb plrdgb,pitpnm3,LOC107718051,LOC107571470,LOC108279208 coding upstream 207862 12772392 ~ 12886397 (-)
kif4 kif4,kif4a,LOC107588748,LOC108278814,LOC107758730,LOC107705946 coding upstream 335768 12900298 ~ 12944968 (-)
G145945 NA non-coding downstream 52615 12507072 ~ 12507342 (-)
LOC122326778 NA non-coding downstream 101687 12456008 ~ 12458270 (-)
G145940 NA non-coding downstream 107302 12452100 ~ 12452655 (-)
G145922 NA non-coding downstream 141453 12418157 ~ 12418504 (-)
G145913 NA non-coding downstream 148524 12411167 ~ 12411433 (-)
LOC122326203 NA non-coding upstream 79997 12644527 ~ 12653182 (-)
G146006 NA non-coding upstream 119117 12683647 ~ 12683880 (-)
G146014 NA non-coding upstream 134470 12699000 ~ 12699280 (-)
LOC122326459 NA non-coding upstream 165656 12730186 ~ 12739267 (-)
G146064 NA non-coding upstream 256810 12821340 ~ 12844440 (-)
LOC122326748 LOC107739910 other downstream 76793 12482213 ~ 12483164 (-)
G145910 NA other downstream 184412 12374846 ~ 12375545 (-)
LOC122326615 LOC101885612 other downstream 398290 12158672 ~ 12161667 (-)
rgs14b LOC107721394,LOC107590127,LOC107689186,LOC107748103,LOC107588771 other downstream 502350 12012211 ~ 12057607 (-)
cnot6a cnot6a,LOC107756798,LOC107689185,LOC107590062,LOC107566218,LOC107749911,LOC108441023,LOC107667594 other downstream 574885 11972216 ~ 11985072 (-)
G146159 NA other upstream 518594 13083124 ~ 13083494 (-)
LOC122326016 NA other upstream 535586 13100116 ~ 13101521 (-)
LOC122326201 cox7b,LOC107713147,LOC107582003,LOC107675192,LOC107697350,LOC107726769,LOC107598778 other upstream 1301885 13866415 ~ 13867643 (-)
LOC122326208 NA other upstream 1567724 14132254 ~ 14139158 (-)
dynll2b dynll2a,LOC107554284 other upstream 1654077 14218607 ~ 14222690 (-)

Expression


Co-expression Network