LOC122326203


Basic Information

Item Value
gene id LOC122326203
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 12644527 ~ 12653182 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU215645
AGAAATACAGAGTTTAACATCAGATcgccattttttttattacgtgtGAAGTAAGAACACGGAGCAGAATGACAGTCTGCGACTCAGGCAGCGTCGATGTAGACCGACGTCAAATTTAACTGGATGTGCTTTTATCCTCGCCGGTTTATCAAGATGAAGGCATCTAGACTCCTGACCTTCTTGCCAGTCCACAACTGATACTGCTGGTACCAAGAGGAAGCTGCCCGAACACTGGAGTTTGTTCAAAGACGCTTCATTGTTGTGAACTCTAAAAGGGGAACAAAAGAGAACCAACCAAGTAGCTTCCAAGAAGACAGGGAAGCTTGTGCAGAAAAAAGCAGCAACTGTGAATCCTCAGATGGCCACTCATTAAAAACCGCATGGTCTTTGGGTGGGGCTTTATCTAGTCAGgttaaataatgttacagttCTGCAGGTAGATCTGCATAGTAAGTATAGATTACATAGTCACATTATTGAGTCcttcaacaaaaatgtttatgatgTCACTGCATTGTATTCTGGAAAAGGATGTTCATGTGATGACACAGTATTATGTTCTGTTCAACCCAGCACTGGTGAAGCAGAATGTTGATAAttggtttaaacattttaataaaagtgtaaagtgtaaagatGATCTTTTGTTTGATccatttgtttgtaaaaatgttttagtgaaTTGTAATGTCTTTTAATCATTATCTTCTAGCAATGTTACAACACTGAAATCACATTCTAgagtactttaaaaaataacagtagTAAACAGTTTTTAGATATTACAGCAGATGTGatgaaataacagtaaataGCAGTCAAATACTTGGcagtattatactgtacagcATATTTTCTACAGCATGTTACtggaatattttttacagtaataaactgTTGCAGCAGATTACAGTAGGTAAACTAAAATTACAGCGTTGTACAGCCAAATGTAGCTGCCAGtagtttactgtaatttttacagtatagttGTTGCTTAATGGTGTGTGGTTGCTTAATGGTATGTGGAAAGACTAACTGCATGACTTTAGAAAGGCACATAATGTCCTCAACTTTCCTCTTATTCACAGGGATACCTTTCTTGGAATGAACACACATATCTTTGAAGTCATTgtgtatattgttattgttcttgTATACTTAATTAATCTTTGGTATTGTAtactgttttatgcatgtttatgatagATCTCTAGTTAATATCACCTCATTTACGCCATGTTTGGTGTCAGTTGTTTTCACATGATCTTACTGAAAGTATGTATGTTGATGTCTCAGCAACATATTAGGTTTCTAAGAATCTTTAGTAGTATGTTTATCAACCTCCAATCCAGTGCATATGTAAATTACTATGTTTAGAGACAAAGAGTCATaaaactctctcttcaaagacATGATTGGCCCTTTAACACCCAAGAGGTATGACCTCCACATATTTCAAAAGGCCTCGGCACAGTGCCCCCCTAGTCTTCTATTTTTCTGGTCTCTTAAACGTCTCACTATTTCTCATCTTCTGAAACCGGCGCCCCCACCCCTGGCGGGGCTGGGAACAATGCAAAACAATGCAAGTATCATACATTTAACTAAACGTAACCAAGGTTTAGTATTAGTTATAGAACCCATTACAAACGAGGCTGATGATTTACAGGTGGATAACACACTTTTTCATAGCTTCACTCTCTGCTTTTCTTGATGGTTTACCATCAAGCCTTCTCTACAGTACACTTTCCCCATGTATGAGTATATTTATGCTTGTGTGTTCAGTTATGTGAgtgaacatttaattaataaaaattctgcttttttttgtaattctgttACACCTGGAAGCTGATAGAAATGATTGCAATTCAACATaattaattgtcattatttatatacatttccc
>XR_006247439.1
CCAGCCAGTTTACACAGTCCGAAGGCTGCTGGATTCTCGACAGGTTCGTGGAGGCGTCCAATATCTTGTGGATTGGGAGGGATTTGGTCCAGAGGAGCGGTCCTGGGTCCCGGCACAAGATATTTTAGATCCCACCCTTATCTCAGAGTTTCGCCGAGCCCAAGGGAACAGTCGGAAGAACGTCAAGGGCCGTTCCTAGAGGAGGGGCTCCTGTAATGATCTCATCCCTACACTGCTATTCCACTCCCAACCTGCAGGATGCCCTCCTTAAACCCTTTGGTTATGCTTCCCCAAAGACTCTAGAAGGCACCATTGTACCTAATCTTGCTTAATACGCTCTTCATTAGCCCTGATTCCCTGCACCTgtgtttaaccctttataagtgtgcttgctctctgcatctatgttcagtcttgagcctaCGTACTGTGGTTGCCAGCTCGCAAGTCAAGTTTGTACCTTATTGTACCTTTTTGACCCCTGTGTCTATTTTCTGTTCCTTGTTTTACGGAAGCTCGGCTATCCAAgtttgtttgtactttgtgactttagtttcattagtaaagatattttttgtttgaagacTCAAGTCTCCTGGCTCTTTTGCTCTTCTGCTCTTGGGTTTCAATGCCTGGAAGTTAGCTCAGTAGCTAATACCACCTGCTCAGAACACCAGAGACCAGGGTTCTAGTCCCGCCTAGGGCGACCCCTGACATACAAAACGCTTCATTGTTGTGAACTCTAAAAGGGGAACAAAAGAGAACCAACCAAGTAGCTTCCAAGAAGACAGGGAAGCTTGTGCAGAAAAAAGCAGCAACTGTGAATCCTCAGATGGCCACTCATTAAAAACCGCATGGTCTTTGGGTGGGGCTTTATCTAGTCAGgttaaataatgttacagttCTGCAGGTAGATCTGCATAGTAAGTATAGATTACATAGTCACATTATTGAGTCcttcaacaaaaatgtttatgatgTCACTGCATTGTATTCTGGAAAAGGATGTTCATGTGATGACACAGTATTATGTTCTGTTCAACCCAGCACTGGTGAAGCAGAATGTTGATAAttggtttaaacattttaataaaagtgtaaagtgtaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU215645 True 1906 lncRNA 0.36 4 12644527 12653182
XR_006247439.1 False 1109 lncRNA 0.44 2 12645798 12647063

Neighbor

gene id symbol gene type direction distance location
serpinf2a serpinf2a,LOC107718058,LOC107699948,LOC107599232,LOC107723708,LOC107684202,LOC107588752 coding downstream 1691 12638695 ~ 12642836 (-)
serpinf1 serpinf1,LOC107718059 coding downstream 5980 12632939 ~ 12638547 (-)
LOC122326011 NA coding downstream 79997 12559957 ~ 12564530 (-)
LOC122326747 LOC107709744,LOC107574620 coding downstream 87009 12556580 ~ 12557518 (-)
LOC122326755 or115-12,LOC107590131,LOC107757195 coding downstream 100636 12542953 ~ 12543891 (-)
slc47a1 slc47a1,LOC107699950,LOC107718054,LOC107571469 coding upstream 89173 12742355 ~ 12762710 (-)
plrdgb plrdgb,pitpnm3,LOC107718051,LOC107571470,LOC108279208 coding upstream 119210 12772392 ~ 12886397 (-)
kif4 kif4,kif4a,LOC107588748,LOC108278814,LOC107758730,LOC107705946 coding upstream 247116 12900298 ~ 12944968 (-)
LOC122326019 LOC107754526 coding upstream 497701 13150883 ~ 13153001 (-)
LOC122326020 LOC107754528,LOC107655654,LOC107596386 coding upstream 500324 13153506 ~ 13155476 (-)
G145945 NA non-coding downstream 137185 12507072 ~ 12507342 (-)
LOC122326778 NA non-coding downstream 186257 12456008 ~ 12458270 (-)
G145940 NA non-coding downstream 191872 12452100 ~ 12452655 (-)
G145922 NA non-coding downstream 226023 12418157 ~ 12418504 (-)
G145913 NA non-coding downstream 233094 12411167 ~ 12411433 (-)
G146006 NA non-coding upstream 30465 12683647 ~ 12683880 (-)
G146014 NA non-coding upstream 45818 12699000 ~ 12699280 (-)
LOC122326459 NA non-coding upstream 77004 12730186 ~ 12739267 (-)
G146064 NA non-coding upstream 168158 12821340 ~ 12844440 (-)
G146065 NA non-coding upstream 172239 12825421 ~ 12826524 (-)
LOC122326748 LOC107739910 other downstream 161363 12482213 ~ 12483164 (-)
G145910 NA other downstream 268982 12374846 ~ 12375545 (-)
LOC122326615 LOC101885612 other downstream 482860 12158672 ~ 12161667 (-)
rgs14b LOC107721394,LOC107590127,LOC107689186,LOC107748103,LOC107588771 other downstream 586920 12012211 ~ 12057607 (-)
cnot6a cnot6a,LOC107756798,LOC107689185,LOC107590062,LOC107566218,LOC107749911,LOC108441023,LOC107667594 other downstream 659455 11972216 ~ 11985072 (-)
G146159 NA other upstream 429942 13083124 ~ 13083494 (-)
LOC122326016 NA other upstream 446934 13100116 ~ 13101521 (-)
LOC122326201 cox7b,LOC107713147,LOC107582003,LOC107675192,LOC107697350,LOC107726769,LOC107598778 other upstream 1213233 13866415 ~ 13867643 (-)
LOC122326208 NA other upstream 1479072 14132254 ~ 14139158 (-)
dynll2b dynll2a,LOC107554284 other upstream 1565425 14218607 ~ 14222690 (-)

Expression


Co-expression Network