G149846


Basic Information

Item Value
gene id G149846
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 5904833 ~ 5913295 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU221752
agcaTCAACACGCCATCGGACGAGGCAAACGAACACCGATCGTCGAATCAATGAGCGTAACGAAAGAAAAACGAGCCGCTAAAAGCGCTTACCTTGACTGTGCGCCTGAGCTGCGGCGTTTGAAGTCTTCTGAGCCGAGTCTTTAATCTGCgaaaaaacaatcaaatcacAGCGAGCAGGTTTATCATTTACACCAAACCGCTCCCCGCCACTCCTTTGAAGAAAGATAAACTCTTTTACTGTCTGCGGAGAACTAGTTTCCTCAGACGCGTTCGTCTAAAAGTCTCACCTTGTTTTTGCTGCTGCACTCGGGCAGCAGGTTCTTGCAGCTCTTGTGGACGTTGACGGCGCAGTCTTTGTCTTTGTTGAAGGATCCGGTCACGCGGTTCCTCAGTGAGCTCAGAGTCCTCTTGACTTTAGTGCCTTTTTCAGGACGCTCCGGtctttcctcctcttcctcgtca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU221752 True 464 lncRNA 0.50 2 5904833 5913295

Neighbor

gene id symbol gene type direction distance location
enc3 enc3,LOC107731329,LOC107593050,LOC107695631,LOC107586932,LOC107755983,LOC103464111,LOC103138520 coding upstream 32538 5862880 ~ 5872295 (+)
tmprss9 tmprss9,LOC107695615,LOC107704409,LOC107731339,LOC107593090,LOC107586983 coding upstream 45609 5851315 ~ 5859224 (+)
mfsd14a1 mfsd14a,hiat1b,LOC107695628,LOC107704433,LOC107731334,LOC107756019 coding upstream 65185 5831270 ~ 5839648 (+)
abhd14a LOC107756017,LOC107586929,LOC107695627,LOC107704435,LOC107593054,LOC107731335 coding upstream 74499 5825104 ~ 5830334 (+)
rassf1 rassf1,LOC107756015,LOC107695625,LOC107704437,LOC107586927,LOC107731340 coding upstream 101871 5794921 ~ 5802962 (+)
LOC122327565 LOC107756023 coding downstream 81093 5994388 ~ 6002630 (+)
LOC122327535 NA coding downstream 93187 6006482 ~ 6008186 (+)
bcor bcor,LOC107756025,LOC107745971,LOC107593046 coding downstream 108711 6022006 ~ 6069920 (+)
sgsh sgsh,sphm,LOC107756031,LOC107704414 coding downstream 317977 6231272 ~ 6235360 (+)
LOC122327484 NA coding downstream 397374 6310669 ~ 6312558 (+)
G149834 NA non-coding upstream 19643 5882964 ~ 5885190 (+)
G149829 NA non-coding upstream 54915 5848992 ~ 5849918 (+)
G149811 NA non-coding upstream 141671 5758011 ~ 5763162 (+)
G149810 NA non-coding upstream 151020 5753179 ~ 5753813 (+)
G149809 NA non-coding upstream 152337 5752232 ~ 5752496 (+)
G149874 NA non-coding downstream 81578 5994873 ~ 5997676 (+)
LOC122327604 NA non-coding downstream 184577 6097872 ~ 6098526 (+)
LOC122327601 NA non-coding downstream 201754 6115049 ~ 6160723 (+)
G149891 mid1ip1b,LOC107756028,LOC107663600,LOC107704421,LOC107593044,LOC107745972,LOC107586944 non-coding downstream 272674 6185969 ~ 6187870 (+)
G149892 NA non-coding downstream 275822 6189117 ~ 6191390 (+)
lsm7 lsm7,LOC107593053,LOC107704434 other upstream 56247 5847131 ~ 5848586 (+)
hyal2b hyal2b,LOC107695624,LOC107756016,LOC107586928,LOC107704436,LOC107593055 other upstream 80731 5810478 ~ 5824102 (+)
tusc2b tusc2,tusc2b,LOC107587002,LOC107593101,LOC107695626 other upstream 98210 5803726 ~ 5806623 (+)
rad54l2 rad54l2,LOC107756013,LOC107695610,LOC107593093 other upstream 115443 5772335 ~ 5789390 (+)
LOC122327321 NA other upstream 159782 5734408 ~ 5745051 (+)
LOC122327524 NA other downstream 10612 5923907 ~ 6012681 (+)
G149895 NA other downstream 278352 6191647 ~ 6192659 (+)
npb npb,LOC107663585,LOC107587005,LOC107756033,LOC107704419,LOC107593099 other downstream 322822 6236117 ~ 6239357 (+)
ccnt2b ccnt2b,LOC107593034,LOC107663476,LOC107739335,LOC107586955,LOC107653589,LOC107745988 other downstream 589619 6502914 ~ 6510456 (+)
G150369 NA other downstream 795193 6708488 ~ 6708891 (+)

Expression


Co-expression Network