LOC122327433


Basic Information

Item Value
gene id LOC122327433
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 5271687 ~ 5278850 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222796.1
GTAACGCGTCAGCGTTCGCAGAAATCACGTGACTTAGTTTGGTTTGACATGATCGCTGCACTGATTCACTGCCCTCTTTCAAGTTAGACGCTTTCAGAAGCGACGCATAAGTATGAGGAACCTTTGCTTCATTTGCTGGATCTTATTACTCGTGGACGTTTCTCCATCTGGTCATGTCAAAACCAATGATGAACACAACATGGCGAGGATAGAACAGTATTCTGGcattaATGTGTTCGTTGCTGTGTCAGATGAAGTGAAAACCGTGATAGTAATGGAGGGAGATCCCGTCACTTTAAACACtaattttactgaaataaagaGAGATGATACCGTACTGTGGATGTTTGGAGATGATAACACTATTATAGCTAAAATGAAAGAAGCAGCTGGAATTTTCTCTGACAATGATgatgagagattcagagacagactgaagctggacagACAGACCGGGTCTCTGACCATCACGAACATCAGAACTCAACACACTGGACTTTATCAGCTAAAAGTCATGAGCACGACCGAGAAACTGAAGAAATTCGGTGTTACTGTCCGCGATGAAGTGCAGTCAGTGTCACTGATGGAGGGAGATACTGTCACTCTACAGACTGGTgttactaaaatacaaaaagatgaTCAGATACTGTGGAAGTTTGGAGATCGAGGCACCATCATTGCTGACTTAAATGGCGATGCTGATGCTAAATGGAAAGACATGATCAAACTAAATGTAAACACTGGCGACCTCACCATCAGAAACGTCCAAACCGAACACTCTGGAGACTATGATTTGGAGATCTACAACAGCAGCACGGCCTTACATAAGAAATTTCGTATTGCAGTTAGTGAGCGCCCCCCGAGTTCAAGCTGGCAGACAGCCGGTCCAGTGTTGGCAGTCGTTGTTGTGATCTTAATCGTGATCGGAATCGGAATCTGTATTGCAATCAAGATGGGTCGGCTTAAAGTATGTTTCACAAAGAacGGTGAAGCAAAAACGGAGGGTGAAAGAATGCAGAGCTTAAACAGTGATGACCAACAGCAGGAGCTCACATTAATAGTTTGAAAATCGACCATTTTGCACTGTAAAAAGGAGttaatacttaatttaatttcattagaAGCAAAATGGAGAGGTGCTTTATTACCAAGTTGATGAATGTCATTAAAAAGTGTGGGAATGATCACGTAAGCACCTTTGCAGTCCGCAACATGCATCGATGCTATCAAAGGAGGAGCATGAACACGATCATTCTCAAGTCATGATCAAAAATGGAGCACTGTCTGTGCATCTACtgttttgaatatataatttacgTATGGTATGCTCAGTAAGGCCTACGTATTTATTCATACTACGTCTAGCATGTTGCTCCAACTAGCTTGAGAAACTTCTTCTTTGAGAGTATTTCAACTCTGTTTATGTTTACATGACAACTGTGTACTAAGACCTGAAAAGTGCGTTATGCACGCCGGGCCAGTAGTTGTTTATGCCACTTTGTAAAGAAACGCTACACGTTTGATTAGTTCGGACTGCTTTCTCACTAAATACTTCTCTAGAATGTAATTGTATGCTGTAGAGTTCACATTCGTCTTCATTGTAATTAGTGGAATGACCAAGCCATGGTGTCCACGGTACTTTTTGCTGTATATATTCCAACTGGACTTTACATGTTTCTTCTGCGTTGTTCTGTTCTTATCTATTGTCAGATCGGTTGTGTCGAGTAAGTAGTCTGGTAAATTGAAACGCATACCGTACCTTTGCACgacatttgcatttgaaataaaaaaaaatgttttatcaa
>XM_043222797.1
GACGTAACGCGTCAGCGTTCGCAGAAATCACGTGACTTAGTTTGGTTTGACATGATCGCTGCACTGATTCACTGCCCTCTTTCAAGTTAGACGCTTTCAGAAGCGACGCATAAGTATGAGGAACCTTTGCTTCATTTGCTGGATCTTATTACTCGTGGACGATGTGTTCGTTGCTGTGTCAGATGAAGTGAAAACCGTGATAGTAATGGAGGGAGATCCCGTCACTTTAAACACtaattttactgaaataaagaGAGATGATACCGTACTGTGGATGTTTGGAGATGATAACACTATTATAGCTAAAATGAAAGAAGCAGCTGGAATTTTCTCTGACAATGATgatgagagattcagagacagactgaagctggacagACAGACCGGGTCTCTGACCATCACGAACATCAGAACTCAACACACTGGACTTTATCAGCTAAAAGTCATGAGCACGACCGAGAAACTGAAGAAATTCGGTGTTACTGTCCGCGATGAAGTGCAGTCAGTGTCACTGATGGAGGGAGATACTGTCACTCTACAGACTGGTgttactaaaatacaaaaagatgaTCAGATACTGTGGAAGTTTGGAGATCGAGGCACCATCATTGCTGACTTAAATGGCGATGCTGATGCTAAATGGAAAGACATGATCAAACTAAATGTAAACACTGGCGACCTCACCATCAGAAACGTCCAAACCGAACACTCTGGAGACTATGATTTGGAGATCTACAACAGCAGCACGGCCTTACATAAGAAATTTCGTATTGCAGTTAGTGAGCGCCCCCCGAGTTCAAGCTGGCAGACAGCCGGTCCAGTGTTGGCAGTCGTTGTTGTGATCTTAATCGTGATCGGAATCGGAATCTGTATTGCAATCAAGATGGGTCGGCTTAAAGTATGTTTCACAAAGAacGGTGAAGCAAAAACGGAGGGTGAAAGAATGCAGAGCTTAAACAGTGATGACCAACAGCAGGAGCTCACATTAATAGTTTGAAAATCGACCATTTTGCACTGTAAAAAGGAGttaatacttaatttaatttcattagaAGCAAAATGGAGAGGTGCTTTATTACCAAGTTGATGAATGTCATTAAAAAGTGTGGGAATGATCACGTAAGCACCTTTGCAGTCCGCAACATGCATCGATGCTATCAAAGGAGGAGCATGAACACGATCATTCTCAAGTCATGATCAAAAATGGAGCACTGTCTGTGCATCTACtgttttgaatatataatttacgTATGGTATGCTCAGTAAGGCCTACGTATTTATTCATACTACGTCTAGCATGTTGCTCCAACTAGCTTGAGAAACTTCTTCTTTGAGAGTATTTCAACTCTGTTTATGTTTACATGACAACTGTGTACTAAGACCTGAAAAGTGCGTTATGCACGCCGGGCCAGTAGTTGTTTATGCCACTTTGTAAAGAAACGCTACACGTTTGATTAGTTCGGACTGCTTTCTCACTAAATACTTCTCTAGAATGTAATTGTATGCTGTAGAGTTCACATTCGTCTTCATTGTAATTAGTGGAATGACCAAGCCATGGTGTCCACGGTACTTTTTGCTGTATATATTCCAACTGGACTTTACATGTTTCTTCTGCGTTGTTCTGTTCTTATCTATTGTCAGATCGGTTGTGTCGAGTAAGTAGTCTGGTAAATTGAAACGCATACCGTACCTTTGCACgacatttgcatttgaaataaaaaaaaatgttttatcaa

Function

GO:

id name namespace
GO:0004197 cysteine-type endopeptidase activity molecular_function
GO:0008234 cysteine-type peptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222796.1 True 1805 mRNA 0.41 7 5271690 5278850
XM_043222797.1 False 1736 mRNA 0.41 6 5271687 5278850

Neighbor

gene id symbol gene type direction distance location
LOC122328167 NA coding upstream 348 5248190 ~ 5271339 (+)
LOC122327557 LOC107749583 coding upstream 23686 5245020 ~ 5248001 (+)
LOC122327291 NA coding upstream 29099 5208683 ~ 5242588 (+)
zgc:158320 NA coding upstream 65988 5196837 ~ 5205699 (+)
LOC122327406 NA coding upstream 88888 5175967 ~ 5182799 (+)
cacna2d2b cacna2d2b,LOC107655410,LOC107720977 coding downstream 5954 5284804 ~ 5307541 (+)
strip1 strip1,LOC107655420,LOC107754611,LOC107653179,LOC107570607 coding downstream 31683 5310533 ~ 5318754 (+)
LOC122327440 NA coding downstream 101331 5380181 ~ 5383399 (+)
LOC122328169 NA coding downstream 106207 5385057 ~ 5394900 (+)
LOC122327507 NA coding downstream 119837 5398687 ~ 5399879 (+)
G149641 NA non-coding upstream 197059 5073993 ~ 5074628 (+)
G149627 NA non-coding upstream 201687 4973734 ~ 5070000 (+)
G149624 LOC107720998,LOC107653181 non-coding upstream 289501 4944699 ~ 4982186 (+)
G149615 NA non-coding upstream 469610 4798640 ~ 4802077 (+)
G149400 gpd1b,LOC107721242,LOC107727040,LOC107698578,LOC107566434 non-coding upstream 494506 4773476 ~ 4777181 (+)
G149720 NA non-coding downstream 157987 5436837 ~ 5438435 (+)
G149729 NA non-coding downstream 207491 5486341 ~ 5494990 (+)
G149733 NA non-coding downstream 253015 5531865 ~ 5532831 (+)
G149762 NA non-coding downstream 330947 5609797 ~ 5610816 (+)
G149786 NA non-coding downstream 374833 5653683 ~ 5653887 (+)
LOC122327380 NA other upstream 67323 5186190 ~ 5204364 (+)
LOC122327529 NA other upstream 164263 5103493 ~ 5107424 (+)
G149646 NA other upstream 167251 5103529 ~ 5104436 (+)
LOC122328161 NA other upstream 272713 4992011 ~ 4998974 (+)
LOC122327517 NA other upstream 555684 4712862 ~ 4716003 (+)
LOC122327428 NA other downstream 174315 5453165 ~ 5457356 (+)
LOC122327321 NA other downstream 455558 5734408 ~ 5745051 (+)
rad54l2 rad54l2,LOC107756013,LOC107695610,LOC107593093 other downstream 493485 5772335 ~ 5789390 (+)
tusc2b tusc2,tusc2b,LOC107587002,LOC107593101,LOC107695626 other downstream 524876 5803726 ~ 5806623 (+)
hyal2b hyal2b,LOC107695624,LOC107756016,LOC107586928,LOC107704436,LOC107593055 other downstream 531628 5810478 ~ 5824102 (+)

Expression


Co-expression Network