LOC122327517


Basic Information

Item Value
gene id LOC122327517
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 4712862 ~ 4716003 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222938.1
AGATACCACTAAACAACCGAAGGAAATGGTTCACGCttatgttttgttctgtttgtgcTGGCGGTGTTTAACTGGTGTGTTCGGTGAGTCGCTGTCGGTGACCGAGGGAGATTCCGTCACTTTACACACCGACGCTTCTCAGATACATCAAGATGAAGACATACTGTGGAAATTTGGAGCTCAAAAGTCTCTTATAGCTCAAAtcaagagagaaaaacaaatcttcCCCGATGTTAGATTCAGAGAAGGAGTGAAGCTGGATCATCAGaccggatctctgaccatcacgaGCGTCTCAACTAAACACACTGGACCCTACGAAGTAAAGATTAGTGGAGAAAAACGCTCAATAAAGAAATTCAGAGTTTCTGTCTATGCTCGTCTGCCCACTCCCAACATTACCAGAGATTCTTCACTGAATAGtttatcatcatcaccatcatcgaATTGTTCGTTGTTGTGTTCGGCGGAGAACGTGGGCCacgtgactctctcctggtacaaaggaaacagtttattgtccagcatcagtgtgtctgatctcagcatcagtctctctctacctctggaggtggaacatcaggataaaaacacctacagctgtgtgatcaacaaccccatcagaaagCAGACCACACACCTCAATGTCACTCAGATCTGTCAAATTCACTCAGTTGACACCCAGGAAGAAAACAGAATGGCATTGTGTAAACCAACAAGAAAAACGAACTCAAAGATGGATATTGTCCATCAAAATTACCCCCAAAACACGAGTTCCAGATGAAACTACTGGAACTTAAACTGGATCCCTCACGCgcattttagttttgttcacATTTATTCCCTCCCAGGTGACCAT
>XM_043222939.1
AGATACCACTAAACAACCGAAGGAAATGGTTCACGCttatgttttgttctgtttgtgcTGGCGGTGTTTAACTGGTGTGTTCGGTGAGTCGCTGTCGGTGACCGAGGGAGATTCCGTCACTTTACACACCGACGCTTCTCAGATACATCAAGATGAAGACATACTGTGGAAATTTGGAGCTCAAAAGTCTCTTATAGCTCAAAtcaagagagaaaaacaaatcttcCCCGATGTTAGATTCAGAGAAGGAGTGAAGCTGGATCATCAGaccggatctctgaccatcacgaGCGTCTCAACTAAACACACTGGACCCTACGAAGTAAAGATTAGTGGAGAAAAACGCTCAATAAAGAAATTCAGAGTTTCTGTCTATGCTCGTCTGCCCACTCCCAACATTACCAGAGATTCTTCACTGAATAGtttatcatcatcaccatcatcgaATTGTTCGTTGTTGTGTTCGGCGGAGAACGTGGGCCacgtgactctctcctggtacaaaggaaacagtttattgtccagcatcagtgtgtctgatctcagcatcagtctctctctacctctggaggtggaacatcaggataaaaacacctacagctgtgtgatcaacaaccccatcagaaagCAGACCACACACCTCAATGTCACTCAGATCTGTCAAATTCACTCAGATCAGAGCCAGCTCTTGTTTTACGTTCTGCTGATTTCCGCTGCTGCTGGGTCTCTGTTGATTATGGCTACAGTTGCGATGTGCtgcaggaaataaaaaaaacgTTGACACCCAGGAAGAAAACAGAATGGCATTGTGTAAACCAACAAGAAAAACGGTAAGATCATTACTGACCGTTTTGCAG
>XR_006247646.1
AGATACCACTAAACAACCGAAGGAAATGGTTCACGCttatgttttgttctgtttgtgcTGGCGGTGTTTAACTGGTGTGTTCGGTGAGTCGCTGTCGGTGACCGAGGGAGATTCCGTCACTTTACACACCGACGCTTCTCAGATACATCAAGATGAAGACATACTGTGGAAATTTGGAGCTCAAAAGTCTCTTATAGCTCAAAtcaagagagaaaaacaaatcttcCCCGATGTTAGATTCAGAGAAGGAGTGAAGCTGGATCATCAGaccggatctctgaccatcacgaGCGTCTCAACTAAACACACTGGACCCTACGAAGTAAAGATTAGTGGAGAAAAACGCTCAATAAAGAAATTCAGAGTTTCTGTCTATGCTCGTCTGCCCACTCCCAACATTACCAGAGATTCTTCACTGAATAGtttatcatcatcaccatcatcgaATTGTTCGTTGTTGTGTTCGGCGGAGAACGTGGGCCacgtgactctctcctggtacaaaggaaacagtttattgtccagcatcagtgtgtctgatctcagcatcagtctctctctacctctggaggtggaacatcaggataaaaacacctacagctgtgtgatcaacaaccccatcagaaagCAGACCACACACCTCAATGTCACTCAGATCTGTCAAATTCACTCAGATCAGAGCCAGCTCTTGTTTTACGTTCTGCTGATTTCCGCTGCTGCTGGGTCTCTGTTGATTATGGCTACAGTTGCGATGTGCtgcaggaaataaaaaaaacgTTGACACCCAGGAAGAAAACAGAATGGCATTGTGTAAACCAACAAGAAAAACGAACTCAAAGATGGATATTGTCCATCAAAATTACCCCCAAAACACGAGTTCCAGATGAAACTACTGGAACTTAAACTGGATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222938.1 False 859 mRNA 0.44 5 4712862 4716003
XM_043222939.1 False 857 mRNA 0.44 5 4712862 4715354
XR_006247646.1 True 911 transcript 0.44 6 4712862 4715952

Neighbor

gene id symbol gene type direction distance location
LOC122327427 NA coding upstream 23737 4685684 ~ 4689125 (+)
LOC122327464 NA coding upstream 31110 4678803 ~ 4681752 (+)
LOC122327417 NA coding upstream 41740 4668745 ~ 4671122 (+)
LOC122328158 LOC107568440 coding upstream 86763 4624627 ~ 4626099 (+)
LOC122327527 NA coding upstream 89513 4616753 ~ 4623349 (+)
LOC122327573 NA coding downstream 5251 4721254 ~ 4723763 (+)
LOC122327502 cela1,zgc:92041,LOC107721235,LOC107570146,LOC107727187,LOC107566436 coding downstream 216441 4932444 ~ 4939804 (+)
LOC122328162 NA coding downstream 286732 5002735 ~ 5003675 (+)
LOC122327500 cela1,zgc:92041,LOC107727187,LOC107566436,LOC107721235,LOC107570146 coding downstream 323891 5039894 ~ 5042101 (+)
LOC122327554 LOC107694397,LOC107570142,LOC107566360 coding downstream 327901 5043904 ~ 5053204 (+)
G149367 NA non-coding upstream 20493 4691000 ~ 4692369 (+)
G149349 NA non-coding upstream 37854 4635991 ~ 4675008 (+)
G149383 NA non-coding downstream 22054 4738057 ~ 4739303 (+)
G149392 NA non-coding downstream 27905 4743908 ~ 4765814 (+)
G149391 NA non-coding downstream 49938 4765941 ~ 4772281 (+)
G149400 gpd1b,LOC107721242,LOC107727040,LOC107698578,LOC107566434 non-coding downstream 57473 4773476 ~ 4777181 (+)
G149615 NA non-coding downstream 82637 4798640 ~ 4802077 (+)
LOC122327552 LOC107568440,LOC107698560 other upstream 291861 4419563 ~ 4421001 (+)
LOC122327447 LOC107741386,LOC107568440 other upstream 472075 4213226 ~ 4240787 (+)
LOC122327446 NA other upstream 653489 4053527 ~ 4059373 (+)
G149157 LOC107561598,LOC107717161,LOC107549384,LOC107742789,LOC107704500 other upstream 859491 3852063 ~ 3853371 (+)
LOC122328138 NA other upstream 933186 3777580 ~ 3779676 (+)
LOC122328161 NA other downstream 276008 4992011 ~ 4998974 (+)
LOC122327529 NA other downstream 387490 5103493 ~ 5107424 (+)
G149646 NA other downstream 387526 5103529 ~ 5104436 (+)
LOC122327380 NA other downstream 470187 5186190 ~ 5204364 (+)
LOC122327428 NA other downstream 737162 5453165 ~ 5457356 (+)

Expression


Co-expression Network